BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018678
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi...   244   1e-62
emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]   241   6e-62
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...   196   2e-48
ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containi...   190   2e-46
ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containi...   147   2e-33

>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 474

 Score =  244 bits (622), Expect = 1e-62
 Identities = 125/201 (62%), Positives = 158/201 (78%), Gaps = 2/201 (0%)
 Frame = -1

Query: 599 FSHLADKCKTIHQLTQLHAQMITTSRIHDNFAASRLLSSSTFS--GNLNYASKLFQTIQK 426
           FS LADKC ++HQL Q+HAQMI ++RIHDN+AASRLLS    S  G+L+YA +LF   Q+
Sbjct: 29  FSLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQE 88

Query: 425 PNSFMYNTLIRAHACSFNPKKSLGLLMDMLMCFVMPGKHTFTFVLKACASLRVVWNCMQV 246
           PNSFM+NTLIRAHA S NP ++L L +DM    V+PGKHTF F+LKAC++ + + +C+QV
Sbjct: 89  PNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQV 148

Query: 245 HTHVVKFGLGFDLHVVNGLVRAYSVSGCLVDARKVFDECSVRSLSIWTSMICGYAQNGDS 66
           HTHV+KFGL  +LHVVNGLVRAYSVS  + +AR+VFDE S RSLSIWT+MI GYAQN  S
Sbjct: 149 HTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCS 208

Query: 65  CEAIWLFDEMVGGGVEASGVT 3
            EA+ LFD+M+  G+E +G T
Sbjct: 209 NEALELFDQMIVEGLEPNGAT 229



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
 Frame = -1

Query: 599 FSHLADKCKTIHQLT---QLHAQMITTSRIHDNFAASRLLSSSTFSGNLNYASKLFQTIQ 429
           F  L   C     L    Q+H  ++      +    + L+ + + S ++  A ++F  + 
Sbjct: 129 FPFLLKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVS 188

Query: 428 KPNSFMYNTLIRAHACSFNPKKSLGLLMDMLMCFVMPGKHTFTFVLKACASLRVVWNCMQ 249
           + +  ++ T+I  +A ++   ++L L   M++  + P   T   VL ACA    +    +
Sbjct: 189 ERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGER 248

Query: 248 VHTHVVKFGLGFDLHVVNGLVRAYSVSGCLVDARKVFDECSVRSLSIWTSMICGYAQNGD 69
           +H  + + G+   + +   LV  Y+ +G ++ A+K+FD  S R+ + W +MICG A +G 
Sbjct: 249 IHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDTISERNTATWNAMICGLAVHGH 308

Query: 68  SCEAI 54
           + EA+
Sbjct: 309 AKEAL 313


>emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
          Length = 476

 Score =  241 bits (616), Expect = 6e-62
 Identities = 124/200 (62%), Positives = 157/200 (78%), Gaps = 2/200 (1%)
 Frame = -1

Query: 596 SHLADKCKTIHQLTQLHAQMITTSRIHDNFAASRLLSSSTFS--GNLNYASKLFQTIQKP 423
           S LADKC ++HQL Q+HAQMI ++RIHDN+AASRLLS    S  G+L+YA +LF   Q+P
Sbjct: 32  SLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEP 91

Query: 422 NSFMYNTLIRAHACSFNPKKSLGLLMDMLMCFVMPGKHTFTFVLKACASLRVVWNCMQVH 243
           NSFM+NTLIRAHA S NP ++L L +DM    V+PGKHTF F+LKAC++ + + +C+QVH
Sbjct: 92  NSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVH 151

Query: 242 THVVKFGLGFDLHVVNGLVRAYSVSGCLVDARKVFDECSVRSLSIWTSMICGYAQNGDSC 63
           THV+KFGL  +LHVVNGLVRAYSVS  + +AR+VFDE S RSLSIWT+MI GYAQN  S 
Sbjct: 152 THVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSN 211

Query: 62  EAIWLFDEMVGGGVEASGVT 3
           EA+ LFD+M+  G+E +G T
Sbjct: 212 EALELFDQMIVEGLEPNGAT 231



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
 Frame = -1

Query: 599 FSHLADKCKTIHQLT---QLHAQMITTSRIHDNFAASRLLSSSTFSGNLNYASKLFQTIQ 429
           F  L   C     L    Q+H  ++      +    + L+ + + S ++  A ++F  + 
Sbjct: 131 FPFLLKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVS 190

Query: 428 KPNSFMYNTLIRAHACSFNPKKSLGLLMDMLMCFVMPGKHTFTFVLKACASLRVVWNCMQ 249
           + +  ++ T+I  +A ++   ++L L   M++  + P   T   VL ACA    +    +
Sbjct: 191 ERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGER 250

Query: 248 VHTHVVKFGLGFDLHVVNGLVRAYSVSGCLVDARKVFDECSVRSLSIWTSMICGYAQNGD 69
           +H  + + G+   + +   LV  Y+ +G ++ A+K+FD  S R+ + W +MICG A +G 
Sbjct: 251 IHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDXISERNTATWNAMICGLAVHGH 310

Query: 68  SCEAI 54
           + EA+
Sbjct: 311 AKEAL 315


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score =  196 bits (499), Expect = 2e-48
 Identities = 108/198 (54%), Positives = 135/198 (68%), Gaps = 2/198 (1%)
 Frame = -1

Query: 590 LADKCKTIHQLTQLHAQMITTSRIHDNFAASRLLSSSTFSGN--LNYASKLFQTIQKPNS 417
           + DKC ++ QL Q+HAQMI TSRI D+FAASRLLS    S +  +NYA KLF++IQ PN 
Sbjct: 55  MVDKCTSMTQLKQIHAQMILTSRISDHFAASRLLSFCALSNSRDINYAIKLFKSIQDPNI 114

Query: 416 FMYNTLIRAHACSFNPKKSLGLLMDMLMCFVMPGKHTFTFVLKACASLRVVWNCMQVHTH 237
           FM+NT+IRA A S NP ++L   + ML   V P K+TF F+LK C S   + +C Q+HTH
Sbjct: 115 FMWNTIIRALANSSNPDQALFFYIQMLRLGVCPNKYTFPFLLKGC-SFCSIQSCKQIHTH 173

Query: 236 VVKFGLGFDLHVVNGLVRAYSVSGCLVDARKVFDECSVRSLSIWTSMICGYAQNGDSCEA 57
           V+KFG   DLHVVN LVR YS+   L DA K+F E   R LSIWT+MI GYAQN  + EA
Sbjct: 174 VLKFGSDLDLHVVNRLVRVYSIFSDLTDAWKLFGEFPERDLSIWTTMISGYAQNFCANEA 233

Query: 56  IWLFDEMVGGGVEASGVT 3
           + LF+ MV  G E +G T
Sbjct: 234 LVLFERMVAEGFEPNGPT 251



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 45/176 (25%), Positives = 87/176 (49%)
 Frame = -1

Query: 572 TIHQLTQLHAQMITTSRIHDNFAASRLLSSSTFSGNLNYASKLFQTIQKPNSFMYNTLIR 393
           +I    Q+H  ++      D    +RL+   +   +L  A KLF    + +  ++ T+I 
Sbjct: 163 SIQSCKQIHTHVLKFGSDLDLHVVNRLVRVYSIFSDLTDAWKLFGEFPERDLSIWTTMIS 222

Query: 392 AHACSFNPKKSLGLLMDMLMCFVMPGKHTFTFVLKACASLRVVWNCMQVHTHVVKFGLGF 213
            +A +F   ++L L   M+     P   T   VL  CA    +    ++H  +++ G+  
Sbjct: 223 GYAQNFCANEALVLFERMVAEGFEPNGPTIASVLSVCARSGSLDLGERIHGFMIERGVEI 282

Query: 212 DLHVVNGLVRAYSVSGCLVDARKVFDECSVRSLSIWTSMICGYAQNGDSCEAIWLF 45
            + +   LV  Y+ +G ++ ARK+FD  + ++++ W +M+CG A +G + EA+ LF
Sbjct: 283 GVILGTALVHMYAKNGKILVARKLFDSMTEKNVATWNAMLCGLASHGHAEEALSLF 338


>ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 465

 Score =  190 bits (482), Expect = 2e-46
 Identities = 104/199 (52%), Positives = 134/199 (67%), Gaps = 3/199 (1%)
 Frame = -1

Query: 590 LADKCKTIHQLTQLHAQMITTSRIH-DNFAASRLLSSSTFS--GNLNYASKLFQTIQKPN 420
           ++DKC T+ QL Q+HAQMI ++ +  D FAASRL  S   S  G+L+ A ++F +  +PN
Sbjct: 24  ISDKCTTLDQLKQVHAQMIVSAVVATDPFAASRLFFSCALSPFGDLSLAFRIFHSTPRPN 83

Query: 419 SFMYNTLIRAHACSFNPKKSLGLLMDMLMCFVMPGKHTFTFVLKACASLRVVWNCMQVHT 240
           SFM+NTLIRA     +   +L L + M    V+PGKHTF F+LKACA +R      QVH 
Sbjct: 84  SFMWNTLIRAQT---HAPHALSLYVAMRRSNVLPGKHTFPFLLKACARVRSFTASQQVHV 140

Query: 239 HVVKFGLGFDLHVVNGLVRAYSVSGCLVDARKVFDECSVRSLSIWTSMICGYAQNGDSCE 60
           HV+KFGL FD HVV+ LVR YSVSG  V AR+VFDE   +  S+WT+M+CGYAQN  S E
Sbjct: 141 HVIKFGLDFDSHVVDALVRCYSVSGHCVSARQVFDETPEKISSLWTTMVCGYAQNFCSNE 200

Query: 59  AIWLFDEMVGGGVEASGVT 3
           A+ LF++MVG G E  G T
Sbjct: 201 ALRLFEDMVGEGFEPGGAT 219



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
 Frame = -1

Query: 599 FSHLADKCKTIHQLT---QLHAQMITTSRIHDNFAASRLLSSSTFSGNLNYASKLFQTIQ 429
           F  L   C  +   T   Q+H  +I      D+     L+   + SG+   A ++F    
Sbjct: 119 FPFLLKACARVRSFTASQQVHVHVIKFGLDFDSHVVDALVRCYSVSGHCVSARQVFDETP 178

Query: 428 KPNSFMYNTLIRAHACSFNPKKSLGLLMDMLMCFVMPGKHTFTFVLKACASLRVVWNCMQ 249
           +  S ++ T++  +A +F   ++L L  DM+     PG  T   VL ACA    +    +
Sbjct: 179 EKISSLWTTMVCGYAQNFCSNEALRLFEDMVGEGFEPGGATLASVLSACARSGCLELGER 238

Query: 248 VHTHVVKFGLGFDLHVVNG--LVRAYSVSGCLVDARKVFDECSVRSLSIWTSMICGYAQN 75
           +H  +   G+G    V+ G  LV  Y+ +G +  AR++FDE   R++  W +MICG    
Sbjct: 239 IHEFMKVKGVGLGEGVILGTALVYMYAKNGEIAMARRLFDEMPERNVVTWNAMICGLGAY 298

Query: 74  GDSCEAIWLFDEMVGGGVEA-SGVT 3
           G   +A+ LF++M   GV   +GVT
Sbjct: 299 GYVDDALGLFEKMKKEGVVVPNGVT 323


>ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  147 bits (370), Expect = 2e-33
 Identities = 73/195 (37%), Positives = 113/195 (57%), Gaps = 2/195 (1%)
 Frame = -1

Query: 581 KCKTIHQLTQLHAQMITTSRIHDNFAASRLLSSS--TFSGNLNYASKLFQTIQKPNSFMY 408
           +C  +  L  + A M+  +   D F  S+L+ SS  T SG++ YA ++F     PN FM+
Sbjct: 16  RCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMW 75

Query: 407 NTLIRAHACSFNPKKSLGLLMDMLMCFVMPGKHTFTFVLKACASLRVVWNCMQVHTHVVK 228
           NT+IR ++ S +P  ++ L  DM +C + P  +TF FVLKAC  L  +    ++H+ +VK
Sbjct: 76  NTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVK 135

Query: 227 FGLGFDLHVVNGLVRAYSVSGCLVDARKVFDECSVRSLSIWTSMICGYAQNGDSCEAIWL 48
            GL F+  +VNGL++ Y+  GC+  A  +FDE      + W++M+ GYAQNG + EA+ L
Sbjct: 136 VGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKL 195

Query: 47  FDEMVGGGVEASGVT 3
           F EM    V +   T
Sbjct: 196 FREMQAENVSSDAFT 210



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 48/173 (27%), Positives = 87/173 (50%)
 Frame = -1

Query: 554 QLHAQMITTSRIHDNFAASRLLSSSTFSGNLNYASKLFQTIQKPNSFMYNTLIRAHACSF 375
           +LH+Q++      +    + L+      G ++YA  +F  + +P+S  ++T++  +A + 
Sbjct: 128 ELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNG 187

Query: 374 NPKKSLGLLMDMLMCFVMPGKHTFTFVLKACASLRVVWNCMQVHTHVVKFGLGFDLHVVN 195
              ++L L  +M    V     T   V+  C  L  +     VH+++ K G+  D+ +  
Sbjct: 188 QAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGT 247

Query: 194 GLVRAYSVSGCLVDARKVFDECSVRSLSIWTSMICGYAQNGDSCEAIWLFDEM 36
            LV  YS  G L +A KVF   + R ++ W++MI GYA +G   +A+ LFD M
Sbjct: 248 ALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAM 300