BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018620
         (2843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268821.1| PREDICTED: pentatricopeptide repeat-containi...   921   0.0  
ref|XP_002324000.1| predicted protein [Populus trichocarpa] gi|2...   863   0.0  
ref|XP_002526948.1| pentatricopeptide repeat-containing protein,...   859   0.0  
ref|XP_003548551.1| PREDICTED: pentatricopeptide repeat-containi...   806   0.0  
ref|XP_002873660.1| pentatricopeptide repeat-containing protein ...   757   0.0  

>ref|XP_002268821.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46610
            [Vitis vinifera]
          Length = 763

 Score =  921 bits (2380), Expect = 0.0
 Identities = 463/769 (60%), Positives = 577/769 (75%), Gaps = 2/769 (0%)
 Frame = -3

Query: 2691 MQALSIWPARNEAWLVPQLNPDLGSCFDYRIRKNRRKRWNLACSLGHNCCNDSELHMFGK 2512
            MQALS+WP++   W VPQL+ +LGS      R+ RRK WN    +    C    L     
Sbjct: 1    MQALSVWPSKGVFWAVPQLDYNLGSSSIPSRRRGRRKLWNPEDPV----CQYRSLAFLWV 56

Query: 2511 YRNIQSNNS--LCTSQNSYLRCEFVSRASRLEVFRFCNAKKGFVVAPFAVAWALEEHSVG 2338
              + +S+     C S      C  +S  S+L++F  C  K+G   A FA+AWALE+ ++G
Sbjct: 57   SSSSRSDRVGVYCGSPKFDFGCGLLSGYSKLKIFLLCERKRGSFGASFALAWALEQQAIG 116

Query: 2337 HNSLEVNSKLLNGIRVDVGNEESGCTQSDIVKERDLNCSNSVSNTEDCPNDQEKEDSNEE 2158
            +  ++ +S  ++ +  +    +  C + D  ++ D N            N++EKE     
Sbjct: 117  NEFVKEDSNSIHSLAGNTETVDIDCLKVDGARDGDEN-----------DNEEEKEAEKNG 165

Query: 2157 SLGYIGRERVDVREFAQSLYLAKTADDVEEVLGGKSVLPLQVYSSVIRGFGKEKKFESAM 1978
             +       VDVR  A  L  A TADDVEEVL  K  LPLQVYS++IRGFG +K+ ++AM
Sbjct: 166  EVIEEKSRNVDVRALAHGLEFATTADDVEEVLKDKVELPLQVYSTMIRGFGTDKRLDAAM 225

Query: 1977 ALVEWLKRKSKENGFLRPNLFIYNGLLGAVKQARKFDVAVEILNDMTMEGVHPNIVTYNT 1798
            ALVEWLKRK + NG   PNLF+YN LLGAVKQ+ KF +  +++NDM  EG+ PN+VTYNT
Sbjct: 226  ALVEWLKRKKETNGSKGPNLFVYNSLLGAVKQSEKFALVEKVMNDMAREGILPNVVTYNT 285

Query: 1797 LMNIYIEQGRESEALNLFEEIKGKGLSPTPASYSTILLAYRRMEDAFGALKFFVNIQGSY 1618
            LM+IY+EQGR  EALN+ EEI+  GL P+P SYST LL YRRMED  GALKFF+ ++ +Y
Sbjct: 286  LMSIYLEQGRSVEALNILEEIQKNGLCPSPVSYSTALLVYRRMEDGHGALKFFIELRENY 345

Query: 1617 KVGEIGRDSEEDWDKEFVKLENFTIRICYQVIRRWLVGNKNFSTDVLRLLTEMDKVGLQT 1438
              GEIG+D++EDW+ EFVKL+NFTIRICYQV+RRWLV   N S  +L+LL +MD  GLQ 
Sbjct: 346  LKGEIGKDADEDWENEFVKLKNFTIRICYQVMRRWLVKEGNQSPILLKLLADMDNAGLQP 405

Query: 1437 GRAEFERLVWACTRPEHHVVAKELYTRIRERYSEISLSVCNHVIWVLGKAKKWWAALEIY 1258
            GRAE+ERLVWACTR EH+VVAKELYTRIRER++EISLSVCNH+IW++GKAKKWWAALEIY
Sbjct: 406  GRAEYERLVWACTREEHYVVAKELYTRIRERHTEISLSVCNHIIWLMGKAKKWWAALEIY 465

Query: 1257 EDLLDKGPEPNNMSYELIVSQFNILLTAAQKRGIWRWGVRLLNKMEEKGLKPGSREWNSV 1078
            EDLLDKGP+PNN+SYEL+VS FNILLTAA+K+GIWRWGVRLLNKME+KGLKPGSREWN+V
Sbjct: 466  EDLLDKGPKPNNLSYELVVSHFNILLTAARKKGIWRWGVRLLNKMEDKGLKPGSREWNAV 525

Query: 1077 LIACSKASETSAAVQIFKRMVERGEKPTIISYGALLSSLEKGKLYDEALQVWKHMIRVGV 898
            L+ACSKA+ETSAAV+IF+RMVE+GEKPTIISYGALLS+LEKGKLYDEA +VW+HM+++GV
Sbjct: 526  LVACSKAAETSAAVEIFRRMVEQGEKPTIISYGALLSALEKGKLYDEASRVWEHMVKMGV 585

Query: 897  QPNLYAYTIMASIYAAQGKFNVVESIIQEMAVTKIEPTVVTFNAIISACAKNNLGTAAYE 718
            +PNLYAYTIMASI   QGK   V+SI++EM    I+ TVVT+NAIIS CA+N L +AA+E
Sbjct: 586  EPNLYAYTIMASICVGQGKLQRVDSILREMETLGIDATVVTYNAIISGCARNGLSSAAFE 645

Query: 717  WFQRMLSKNVSPNEVSYDMLIEALANDGKPRLAYSLYLSAQNDGLNLSSKTYDAVVESSQ 538
            WF RM    + PNE++Y+MLIEALA DGKPRLA+ LY  AQN+GLNLS+K YDAVV SSQ
Sbjct: 646  WFHRMKVGKIQPNEITYEMLIEALAKDGKPRLAFELYSRAQNEGLNLSTKAYDAVVLSSQ 705

Query: 537  VYGAAIDVATLGPRPPEKKKKVEIRKSLSEFSNLADVPRRSKPFDSKEL 391
            V+ A IDV+ LGPRPPEKKKK+  RK+LS F NLADVPRR+KPFD KE+
Sbjct: 706  VHSATIDVSLLGPRPPEKKKKLLARKTLSAFCNLADVPRRAKPFDRKEI 754


>ref|XP_002324000.1| predicted protein [Populus trichocarpa] gi|222867002|gb|EEF04133.1|
            predicted protein [Populus trichocarpa]
          Length = 709

 Score =  863 bits (2231), Expect = 0.0
 Identities = 447/773 (57%), Positives = 559/773 (72%), Gaps = 6/773 (0%)
 Frame = -3

Query: 2691 MQALSIWPARNEAWLVPQLN-PDLGSCFDYRIRKNRR--KRWNLACSLGHNCCNDSELHM 2521
            MQ LS+WP    +  VP L   +  SCF       RR  KRW L  ++            
Sbjct: 1    MQTLSVWPLSGGSCAVPHLEFEEDSSCF----LSTRRGIKRWGLVDNV------------ 44

Query: 2520 FGKYRNIQSNNSLCTSQNSYLRCEFVSRASRLEVFRFCNAKKGFVVAPFAVAWALEEHSV 2341
                   Q  +S     +  LR  F+S  S+++   F   K+G   +  A+A ALE+  +
Sbjct: 45   ------FQGASSGFPMVSGDLR--FLSNHSKIKYVCFRETKEGSFGSSLALASALEQQKI 96

Query: 2340 GHNSLEVNSKLLNGIRVDVGNEESGCTQSDIVKERDLNCSNSVSNTEDCPNDQEKEDSNE 2161
            G+    V S L                                               ++
Sbjct: 97   GNEFHRVESSL-----------------------------------------------DD 109

Query: 2160 ESLGYIGRER---VDVREFAQSLYLAKTADDVEEVLGGKSVLPLQVYSSVIRGFGKEKKF 1990
             SLG  G ER   +DV   AQSLY AKT DD+EEVL  K  LP+QVY S+I+GFG +KK 
Sbjct: 110  RSLGEAGEERDEKIDVPALAQSLYFAKTVDDIEEVLKDKGELPVQVYLSMIKGFGWDKKM 169

Query: 1989 ESAMALVEWLKRKSKENGFLRPNLFIYNGLLGAVKQARKFDVAVEILNDMTMEGVHPNIV 1810
            E A+ALV+WLK K + +G + PNLFIYN LL AVKQ+ +++   +IL  MT EGV PN+V
Sbjct: 170  EPAIALVDWLKIKKETDGTIVPNLFIYNSLLSAVKQSEQYEETEKILERMTQEGVAPNVV 229

Query: 1809 TYNTLMNIYIEQGRESEALNLFEEIKGKGLSPTPASYSTILLAYRRMEDAFGALKFFVNI 1630
            TYN LM IY++QG+  +AL++ EE++  G +P+ ASYS+ LLAYR+MED  GALKFFV I
Sbjct: 230  TYNILMVIYVKQGQAKKALDVLEEMRRNGFTPSAASYSSALLAYRKMEDGDGALKFFVEI 289

Query: 1629 QGSYKVGEIGRDSEEDWDKEFVKLENFTIRICYQVIRRWLVGNKNFSTDVLRLLTEMDKV 1450
            +  Y  GEIG+D++EDW++E+VKLENFTIR+CYQV+RRWLV  +N +T+VL+LLT+MDK 
Sbjct: 290  KDKYMKGEIGKDADEDWEREYVKLENFTIRVCYQVMRRWLVRLENLNTNVLKLLTDMDKA 349

Query: 1449 GLQTGRAEFERLVWACTRPEHHVVAKELYTRIRERYSEISLSVCNHVIWVLGKAKKWWAA 1270
             LQ GR+++ERLVWACTR EH+VVAKELY RIRER S+ISLSVCNHVIW++GKAKKWWAA
Sbjct: 350  ELQPGRSDYERLVWACTREEHYVVAKELYIRIRERCSDISLSVCNHVIWLMGKAKKWWAA 409

Query: 1269 LEIYEDLLDKGPEPNNMSYELIVSQFNILLTAAQKRGIWRWGVRLLNKMEEKGLKPGSRE 1090
            LE+YEDLLDKGP+PNN+SYELIVS FN+LLTAA+KRGIWRWGVRLLNKMEEKGLKPGS+E
Sbjct: 410  LEVYEDLLDKGPKPNNLSYELIVSYFNVLLTAAKKRGIWRWGVRLLNKMEEKGLKPGSKE 469

Query: 1089 WNSVLIACSKASETSAAVQIFKRMVERGEKPTIISYGALLSSLEKGKLYDEALQVWKHMI 910
            WN+VL+ACSKASET+AAVQIF+RMVE+GEKPT+ISYGALLS+LEKG+LYDEA++VW+HM+
Sbjct: 470  WNAVLVACSKASETAAAVQIFRRMVEQGEKPTVISYGALLSALEKGRLYDEAVRVWEHML 529

Query: 909  RVGVQPNLYAYTIMASIYAAQGKFNVVESIIQEMAVTKIEPTVVTFNAIISACAKNNLGT 730
            +VGV+PN+YAYTIMAS++  QG F +V++II EM  T IEPTVVT+NAIIS CA+NNL +
Sbjct: 530  KVGVKPNVYAYTIMASVFTRQGNFRLVDAIINEMVSTGIEPTVVTYNAIISGCARNNLSS 589

Query: 729  AAYEWFQRMLSKNVSPNEVSYDMLIEALANDGKPRLAYSLYLSAQNDGLNLSSKTYDAVV 550
            AAYEWF RM  +N+SPNE++YDMLIEALA  GKPRLAY LYL AQN+ L LS K YDAV+
Sbjct: 590  AAYEWFHRMKVQNISPNEITYDMLIEALAKSGKPRLAYELYLRAQNEDLQLSPKAYDAVM 649

Query: 549  ESSQVYGAAIDVATLGPRPPEKKKKVEIRKSLSEFSNLADVPRRSKPFDSKEL 391
             SS+ YGA ID + LGPRPP+KKKKV+IRK+L+EF NLADVPRRSKPF+ KE+
Sbjct: 650  HSSEAYGATIDTSVLGPRPPDKKKKVQIRKTLTEFCNLADVPRRSKPFNKKEI 702


>ref|XP_002526948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533700|gb|EEF35435.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 671

 Score =  859 bits (2220), Expect = 0.0
 Identities = 426/668 (63%), Positives = 533/668 (79%), Gaps = 7/668 (1%)
 Frame = -3

Query: 2373 AVAWALEEHSVGHNSLEVNSKLLNGIRVDVGNEESGCTQSDIVKERDLNCSNSVSNTEDC 2194
            A AWAL++  +      V   L +G+   +G  E          + D+N  N +   ED 
Sbjct: 9    AFAWALQKQDISSEFHGVEPSLDDGL---LGKSE----------KEDVNPHN-LGRLEDS 54

Query: 2193 PNDQEKEDSNEE----SLGYIGRER---VDVREFAQSLYLAKTADDVEEVLGGKSVLPLQ 2035
             +D   ++ N E    S   +G E+   +DVR  A+SL+ A+TADDVEEVL  K  LPLQ
Sbjct: 55   DDDNNNQEDNIELDLRSKEGVGEEKCRSIDVRSLARSLHSAQTADDVEEVLKDKGELPLQ 114

Query: 2034 VYSSVIRGFGKEKKFESAMALVEWLKRKSKENGFLRPNLFIYNGLLGAVKQARKFDVAVE 1855
            VYSS+I+ FG + K ESA+ALVEWLKR+ +    + PNLFIYN LL AVK+++ F+ A +
Sbjct: 115  VYSSMIKAFGWDNKMESALALVEWLKRRKEIGSSIGPNLFIYNSLLSAVKKSKLFEEAEK 174

Query: 1854 ILNDMTMEGVHPNIVTYNTLMNIYIEQGRESEALNLFEEIKGKGLSPTPASYSTILLAYR 1675
            ILNDMT EG+ PN+VTYNTLM IY+E+G+ ++ALN+ E++  KG  PT ASYST LLAYR
Sbjct: 175  ILNDMTQEGIAPNVVTYNTLMGIYVEKGQATKALNILEQMHEKGFIPTAASYSTALLAYR 234

Query: 1674 RMEDAFGALKFFVNIQGSYKVGEIGRDSEEDWDKEFVKLENFTIRICYQVIRRWLVGNKN 1495
             MED  GAL FFV+I+  Y  G+IG++S+E+W+ EFVKLE F IRICYQV+RRWLV + N
Sbjct: 235  GMEDGHGALAFFVDIKDKYLKGKIGKNSDENWENEFVKLETFIIRICYQVMRRWLVRHDN 294

Query: 1494 FSTDVLRLLTEMDKVGLQTGRAEFERLVWACTRPEHHVVAKELYTRIRERYSEISLSVCN 1315
            FSTDVL+LLT+MDK GLQ  +AE+ERLVWACTR +H+ V KELY RIRER+S+ISLSVCN
Sbjct: 295  FSTDVLKLLTDMDKAGLQPSQAEYERLVWACTREDHYAVGKELYIRIRERHSKISLSVCN 354

Query: 1314 HVIWVLGKAKKWWAALEIYEDLLDKGPEPNNMSYELIVSQFNILLTAAQKRGIWRWGVRL 1135
            H+IW++GKAKKWWAALEIYEDLLDKGP PNNMSYELIVS FNILLTAA+KRGIWRWGVRL
Sbjct: 355  HLIWLMGKAKKWWAALEIYEDLLDKGPNPNNMSYELIVSHFNILLTAARKRGIWRWGVRL 414

Query: 1134 LNKMEEKGLKPGSREWNSVLIACSKASETSAAVQIFKRMVERGEKPTIISYGALLSSLEK 955
            LNKME+KGLKPGSREWN+VL+ACSKASET+AAVQIF+RM+E+GEKPTI+SYGALLS+LEK
Sbjct: 415  LNKMEDKGLKPGSREWNAVLVACSKASETTAAVQIFRRMIEQGEKPTIVSYGALLSALEK 474

Query: 954  GKLYDEALQVWKHMIRVGVQPNLYAYTIMASIYAAQGKFNVVESIIQEMAVTKIEPTVVT 775
            GKLYDEA++VW+HM++V V+PNLYAYTIMAS++A QGKF  V++IIQ+M  + IEPT++T
Sbjct: 475  GKLYDEAVRVWEHMLKVDVKPNLYAYTIMASVFAGQGKFTYVDAIIQKMVSSGIEPTIIT 534

Query: 774  FNAIISACAKNNLGTAAYEWFQRMLSKNVSPNEVSYDMLIEALANDGKPRLAYSLYLSAQ 595
            +NAIIS C  NNL +AAYEWF RM  +N+ PN+++Y+MLIEALA DGKPRLAY LYL A+
Sbjct: 535  YNAIISGCTHNNLSSAAYEWFHRMKVQNMPPNKITYEMLIEALAKDGKPRLAYELYLRAK 594

Query: 594  NDGLNLSSKTYDAVVESSQVYGAAIDVATLGPRPPEKKKKVEIRKSLSEFSNLADVPRRS 415
             +GL+LS+K YDAV+ SSQVYGA ID+  LGPRPP+KKK+V+IRK+L+EF +LADVPRRS
Sbjct: 595  YEGLDLSAKVYDAVLRSSQVYGATIDINVLGPRPPDKKKRVKIRKTLTEFCDLADVPRRS 654

Query: 414  KPFDSKEL 391
            KPF+  E+
Sbjct: 655  KPFERHEI 662


>ref|XP_003548551.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46610-like
            [Glycine max]
          Length = 808

 Score =  806 bits (2082), Expect = 0.0
 Identities = 439/812 (54%), Positives = 549/812 (67%), Gaps = 48/812 (5%)
 Frame = -3

Query: 2682 LSIWPARNEAWLVPQLNPDLGSCFDYRIRKNRRKRWNLACSLGHNCCNDSELHMFGK-YR 2506
            +S WP++    +VP+         D    +NRR+R  L  +   +      +  F + Y 
Sbjct: 2    ISTWPSKVNHLVVPRFEIGPSGVTD----QNRRRRVKLGFAFSVSHSEKVSVFQFSRGYG 57

Query: 2505 NIQSNNSLCTSQNSYLRCEFVSRASRLEVFRFCNAKKGFV--VAPFAVAWALEEHSVGH- 2335
             +  +          LRC F+   SR ++       K  V  +AP  + WALEE  VG  
Sbjct: 58   TVVFSGHAKLD----LRCGFLLGCSRPKLGIILKPHKSHVGDLAP-PLGWALEEDGVGSE 112

Query: 2334 --------NSLEVNS-----KLLNGIRV------------DVGNEESGCTQ--------- 2257
                    N   VN      K LN  +V            D  ++ESG  +         
Sbjct: 113  LVDEQIDSNDASVNRESEGVKSLNLDQVQDSDFEGQIRGYDDDSKESGGNELVEEQTDSN 172

Query: 2256 -----SDIVKERDLNCS---NSVSNTEDCPNDQEKEDSNEESLGYIGRERVDVREFAQSL 2101
                  D+   + LN     +S    + C +D  KE   EES G     +VDVR  A SL
Sbjct: 173  DALVNGDLEGVKSLNLDQVKDSDCEGKMCGDDNSKEGGEEESDG-----KVDVRALALSL 227

Query: 2100 YLAKTADDVEEVLGGKSVLPLQVYSSVIRGFGKEKKFESAMALVEWLK-RKSKENGFLRP 1924
               KT +DV  +L  K  LPLQV+S++I GFGKEK+ +SA+ L  W+K RK + NG   P
Sbjct: 228  QTVKTVEDVGGILKDKGDLPLQVFSTIISGFGKEKRMDSALILFNWMKKRKIETNGSFGP 287

Query: 1923 NLFIYNGLLGAVKQARKFDVAVEILNDMTMEGVHPNIVTYNTLMNIYIEQGRESEALNLF 1744
            NLFIYNGLLG VKQ+ +F     ILN+M  +G+  N+VTYNTLM IYIE+G   +ALN+ 
Sbjct: 288  NLFIYNGLLGVVKQSGQFAEMEVILNEMAEDGIAYNVVTYNTLMAIYIEKGECDKALNML 347

Query: 1743 EEIKGKGLSPTPASYSTILLAYRRMEDAFGALKFFVNIQGSYKVGEIGRDSE-EDWDKEF 1567
            EEI+  GL+P+P SYS  LLAYRRMED +GAL FFV  +  Y+ GEIG+D + EDW+KE 
Sbjct: 348  EEIRRNGLTPSPVSYSQALLAYRRMEDGYGALNFFVEFREKYRQGEIGKDDDGEDWEKEC 407

Query: 1566 VKLENFTIRICYQVIRRWLVGNKNFSTDVLRLLTEMDKVGLQTGRAEFERLVWACTRPEH 1387
            +KLE FTIR+CYQV+R WLV   N S +VL+ L +MD VG+   RA+ ERL WACTR +H
Sbjct: 408  LKLEKFTIRVCYQVMRCWLVSRDNLSKNVLKFLVDMDNVGIPLPRADLERLAWACTREDH 467

Query: 1386 HVVAKELYTRIRERYSEISLSVCNHVIWVLGKAKKWWAALEIYEDLLDKGPEPNNMSYEL 1207
            ++V KELY RIRERY +ISLSVCNH IW++GKAKKWWAALEIYEDLLDKGP+PNN+SYEL
Sbjct: 468  YIVVKELYNRIRERYDKISLSVCNHAIWLMGKAKKWWAALEIYEDLLDKGPKPNNLSYEL 527

Query: 1206 IVSQFNILLTAAQKRGIWRWGVRLLNKMEEKGLKPGSREWNSVLIACSKASETSAAVQIF 1027
            IVS FN LL+AA+++GIWRWGV+LLNKME+KGLKPG REWN+VL+ACSKASET+AAVQIF
Sbjct: 528  IVSHFNFLLSAAKRKGIWRWGVKLLNKMEDKGLKPGCREWNAVLVACSKASETTAAVQIF 587

Query: 1026 KRMVERGEKPTIISYGALLSSLEKGKLYDEALQVWKHMIRVGVQPNLYAYTIMASIYAAQ 847
            KRMVE GEKPTIISYGALLS+LEKGKLYD+AL+VW HMI+VGV+PN YAYTIMASI+ AQ
Sbjct: 588  KRMVENGEKPTIISYGALLSALEKGKLYDDALRVWNHMIKVGVEPNAYAYTIMASIHTAQ 647

Query: 846  GKFNVVESIIQEMAVTKIEPTVVTFNAIISACAKNNLGTAAYEWFQRMLSKNVSPNEVSY 667
            G FN V++IIQEM    IE TVVT+NAII+ CA N + + AYEWF RM  +N+SPNE++Y
Sbjct: 648  GNFNRVDAIIQEMVTLGIEVTVVTYNAIITGCAHNGMSSVAYEWFHRMKVQNISPNEITY 707

Query: 666  DMLIEALANDGKPRLAYSLYLSAQNDGLNLSSKTYDAVVESSQVYGAAIDVATLGPRPPE 487
            +MLI ALANDGKPRLAY LY  A+N+GL LSSK YDAVV+SSQ   A I++  LGPRP +
Sbjct: 708  EMLIVALANDGKPRLAYQLYTRAKNEGLTLSSKAYDAVVQSSQANNATIELGLLGPRPVD 767

Query: 486  KKKKVEIRKSLSEFSNLADVPRRSKPFDSKEL 391
            KKKKV+IRK+L+EF NLA VP+RS+PFD  E+
Sbjct: 768  KKKKVQIRKTLNEFYNLAGVPKRSQPFDRNEI 799


>ref|XP_002873660.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297319497|gb|EFH49919.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 674

 Score =  757 bits (1954), Expect = 0.0
 Identities = 400/739 (54%), Positives = 508/739 (68%), Gaps = 1/739 (0%)
 Frame = -3

Query: 2691 MQALSIWPARNEAWLVPQLNPDLGSCFDYRIRKNRRKRWNLACSLGHNCCNDSELHMFGK 2512
            MQALSIWP ++   +  +L  +L  C  + +    RKR    CS    C        FG+
Sbjct: 1    MQALSIWPLKSGLLVGSRLEFEL-DCSCFVVSHKSRKRH---CSAQQGC--------FGR 48

Query: 2511 YRNIQSNNSLCTSQNSYLRCEFVSRASRLEVFRFCNAKKGFVVAPFAVAWALEEHSVGHN 2332
              ++     +  S N       V+  S+  V   C  K+    +   V WA E+  +G  
Sbjct: 49   ISSL-----ILVSSNRKFEGLAVNPTSK--VLFLCEPKRNLSGSSVGVGWATEQRELGE- 100

Query: 2331 SLEVNSKLLNGIRVDVGNEESGCTQSDIVKERDLNCSNSVSNTEDCPNDQEKEDSNEESL 2152
                          +V  E+S   Q+                     N  EK +S     
Sbjct: 101  --------------EVSTEDSSYPQT--------------------VNGGEKTNS----- 121

Query: 2151 GYIGRERVDVREFAQSLYLAKTADDVEEVLGGKSVLPLQVYSSVIRGFGKEKKFESAMAL 1972
                  RVDVRE A SL  AKTADDV+ V+     LPLQVY ++IRGFGK+K+ + A+A+
Sbjct: 122  ------RVDVRELAYSLRAAKTADDVDIVIKEMGELPLQVYCAMIRGFGKDKRLKPAIAV 175

Query: 1971 VEWLKRKSKENG-FLRPNLFIYNGLLGAVKQARKFDVAVEILNDMTMEGVHPNIVTYNTL 1795
            V+WL+RK  E+G  + PNLFIYN LLGA+KQ+   + A +IL+DM  EG+ PNIVTYNTL
Sbjct: 176  VDWLRRKKSESGGVIGPNLFIYNSLLGAMKQSSVGE-AEKILSDMEEEGIVPNIVTYNTL 234

Query: 1794 MNIYIEQGRESEALNLFEEIKGKGLSPTPASYSTILLAYRRMEDAFGALKFFVNIQGSYK 1615
            M IY+E+G   +AL + + +K KG  P P +YST LL YRRMED  GAL+FFV ++  Y 
Sbjct: 235  MVIYMEKGEFHKALGILDLVKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYS 294

Query: 1614 VGEIGRDSEEDWDKEFVKLENFTIRICYQVIRRWLVGNKNFSTDVLRLLTEMDKVGLQTG 1435
              EIG D++ DW+ EFVKLENF  RICYQV+RRWLV ++N++T VL+LL  MD  G +  
Sbjct: 295  KREIGNDADYDWEFEFVKLENFIGRICYQVMRRWLVKDENWTTRVLKLLNAMDNAGPKPS 354

Query: 1434 RAEFERLVWACTRPEHHVVAKELYTRIRERYSEISLSVCNHVIWVLGKAKKWWAALEIYE 1255
            R E ERL+WACTR EH++V KELY RIRER+ EISLSVCNH+IW++GKAKKWWAALEIYE
Sbjct: 355  REEHERLIWACTREEHYIVGKELYKRIRERFPEISLSVCNHLIWLMGKAKKWWAALEIYE 414

Query: 1254 DLLDKGPEPNNMSYELIVSQFNILLTAAQKRGIWRWGVRLLNKMEEKGLKPGSREWNSVL 1075
            DLLD+GPEPNN+SYEL+VS FNILL+AA +RGIWRWGVRLLNKME+KGLKP SR WN+VL
Sbjct: 415  DLLDEGPEPNNLSYELVVSHFNILLSAASRRGIWRWGVRLLNKMEDKGLKPQSRHWNAVL 474

Query: 1074 IACSKASETSAAVQIFKRMVERGEKPTIISYGALLSSLEKGKLYDEALQVWKHMIRVGVQ 895
            +ACSKASET+AA+QIFK MV+ GEKPT+ISYGALLS+LEKGKLYDEA +VW HMI+VG++
Sbjct: 475  VACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIE 534

Query: 894  PNLYAYTIMASIYAAQGKFNVVESIIQEMAVTKIEPTVVTFNAIISACAKNNLGTAAYEW 715
            PNLYAYT MAS+   Q KFN+++++++EMA   IEP+VVT+NA+IS CA+N L   AYEW
Sbjct: 535  PNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTYNAVISGCARNGLSGVAYEW 594

Query: 714  FQRMLSKNVSPNEVSYDMLIEALANDGKPRLAYSLYLSAQNDGLNLSSKTYDAVVESSQV 535
            F RM  + V PNE++Y+MLIEALAND KPRLAY L+L AQNDGL LSSK YDAVV+S++ 
Sbjct: 595  FHRMRGEKVEPNEITYEMLIEALANDAKPRLAYELHLKAQNDGLKLSSKPYDAVVKSAET 654

Query: 534  YGAAIDVATLGPRPPEKKK 478
            YGA ID+  LGPRP ++K+
Sbjct: 655  YGATIDLNLLGPRPHKEKR 673