BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018551
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabi...   349   8e-94
ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH...   348   2e-93
ref|XP_004146247.1| PREDICTED: putative RNA-binding protein YlmH...   347   2e-93
ref|XP_002316899.1| predicted protein [Populus trichocarpa] gi|2...   345   9e-93
emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]   344   2e-92

>ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabidopsis thaliana]
           gi|16648939|gb|AAL24321.1| Unknown protein [Arabidopsis
           thaliana] gi|24899783|gb|AAN65106.1| Unknown protein
           [Arabidopsis thaliana] gi|27311617|gb|AAO00774.1|
           Unknown protein [Arabidopsis thaliana]
           gi|30984534|gb|AAP42730.1| At1g53120 [Arabidopsis
           thaliana] gi|332194772|gb|AEE32893.1| RNA-binding S4
           domain-containing protein [Arabidopsis thaliana]
          Length = 320

 Score =  349 bits (895), Expect = 8e-94
 Identities = 176/280 (62%), Positives = 217/280 (77%), Gaps = 13/280 (4%)
 Frame = +2

Query: 164 TQLPHGSPVLGLCQLAHTVKGDVHNLL---GDKNVFEDARRIVEMAKRASMRQQVLHTNF 334
           T  P     L  C  A  +KGDV  LL   GD+ V ++ ++I+EMA+RAS +++VLHT+F
Sbjct: 41  TSFPLRQSALRRCYSAEAIKGDVDFLLKGVGDQAVAKEVKQILEMARRASSKREVLHTDF 100

Query: 335 LTPPILKETKLVLEKLADIRTIAQGGYPQAELCRLSVGHPEVLTTDPDIIAALSITGNFG 514
           LTPPI+KE+  +LEK AD++ +AQGGYP+AE CR+S+GHP+VLT+DPDI+AALSITGNFG
Sbjct: 101 LTPPIVKESVSLLEKFADVKIVAQGGYPEAERCRISIGHPDVLTSDPDIVAALSITGNFG 160

Query: 515 FQPCSHGDFLGAILGTGISREKLGDIILQ----------XXXXXXXXXXXXXVGNVSVSC 664
           FQPCSHGDFLGAILGTGISREKLGDI++Q                       VGNV V+C
Sbjct: 161 FQPCSHGDFLGAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTC 220

Query: 665 KRIPLLALEYEPPRTMAFKSVEASLRVDAIASAGFKISRSKMAGLISSGDVRVNWITIFK 844
            +IPLLALEYEPPRT +FK+VEASLR+DA+ASAGFKISRSK+  LISS DVRVNW T+ K
Sbjct: 221 SKIPLLALEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTK 280

Query: 845 SNTMIKTGDIISVSQMGRLKVGEINTTKKGKFAVELITYL 964
           + T++KTGD++SVS  GRLK+GEIN TKKGKFAVE+I YL
Sbjct: 281 NGTIVKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIRYL 320


>ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH [Vitis vinifera]
           gi|302142996|emb|CBI20291.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  348 bits (892), Expect = 2e-93
 Identities = 181/298 (60%), Positives = 222/298 (74%), Gaps = 14/298 (4%)
 Frame = +2

Query: 113 MTRLLSPVYPINKLFPFTQLPH-GSPVLGLCQLAHTVKGDVHNLL---GDKNVFEDARRI 280
           +T + + ++    L  F    H  S   G+C LA  +KGD ++LL    D++  E  + I
Sbjct: 24  LTHINNTLFYYKNLRSFPLSTHLNSSASGMCHLAQAMKGDANSLLKGVADRSTIEAVKHI 83

Query: 281 VEMAKRASMRQQVLHTNFLTPPILKETKLVLEKLADIRTIAQGGYPQAELCRLSVGHPEV 460
           +EMAKRAS R++VLHT+FLTPP+LKE+ +VLEKLAD++ +AQGGYPQAE CRLSVGH EV
Sbjct: 84  LEMAKRASARREVLHTDFLTPPVLKESMIVLEKLADMKAVAQGGYPQAERCRLSVGHSEV 143

Query: 461 LTTDPDIIAALSITGNFGFQPCSHGDFLGAILGTGISREKLGDIILQ----------XXX 610
           LTT PDI+AAL ITGNFGFQ CSHGDFLGAILGTGI+REKLGDIILQ             
Sbjct: 144 LTTAPDIVAALRITGNFGFQSCSHGDFLGAILGTGIAREKLGDIILQGEKGAQVLIVPEL 203

Query: 611 XXXXXXXXXXVGNVSVSCKRIPLLALEYEPPRTMAFKSVEASLRVDAIASAGFKISRSKM 790
                     VGNVSVSC ++PLLALEYE PRT  FK++E SLRVDA+ASAGFK+SRSK+
Sbjct: 204 VDFLVSSLEKVGNVSVSCTKMPLLALEYEEPRTTTFKTIELSLRVDALASAGFKLSRSKL 263

Query: 791 AGLISSGDVRVNWITIFKSNTMIKTGDIISVSQMGRLKVGEINTTKKGKFAVELITYL 964
             LIS+GDVRVNW T+ K+ T +KTGD++SVS  GRLK+GEIN+TKKGK+AVELI +L
Sbjct: 264 VDLISNGDVRVNWTTVTKNGTTLKTGDVVSVSGKGRLKIGEINSTKKGKYAVELIRFL 321


>ref|XP_004146247.1| PREDICTED: putative RNA-binding protein YlmH-like [Cucumis sativus]
           gi|449495519|ref|XP_004159865.1| PREDICTED: putative
           RNA-binding protein YlmH-like [Cucumis sativus]
          Length = 319

 Score =  347 bits (891), Expect = 2e-93
 Identities = 188/311 (60%), Positives = 230/311 (73%), Gaps = 16/311 (5%)
 Frame = +2

Query: 80  WSAMRFVDKASMTRLLSPVYPINKL-FPFTQLPHGSPV--LGLCQLAHTVKGDVHNLL-- 244
           WS  R    +S  R L+    +N+L F   + P  SP+   G+CQL   VKGD+  LL  
Sbjct: 12  WSLRRAAQFSSFRRPLA--LNLNRLCFNEARFP-SSPLGTSGICQLVQAVKGDIDVLLNG 68

Query: 245 -GDKNVFEDARRIVEMAKRASMRQQVLHTNFLTPPILKETKLVLEKLADIRTIAQGGYPQ 421
            GDK V  D ++I+ MAKR+  R++VLHTNFLTPP++KE+ L ++KLAD++ IAQGGYP+
Sbjct: 69  VGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIAQGGYPE 128

Query: 422 AELCRLSVGHPEVLTTDPDIIAALSITGNFGFQPCSHGDFLGAILGTGISREKLGDIILQ 601
           AE CR+SVGH + LT+DPDII+ALSITGNF F PCSHGDFLG+ILGTGI+REKLGDI+LQ
Sbjct: 129 AERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIMLQ 188

Query: 602 ----------XXXXXXXXXXXXXVGNVSVSCKRIPLLALEYEPPRTMAFKSVEASLRVDA 751
                                  VGNV+VSC RIPL ALEYEPP+T  FK++EASLRVDA
Sbjct: 189 EETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIEASLRVDA 248

Query: 752 IASAGFKISRSKMAGLISSGDVRVNWITIFKSNTMIKTGDIISVSQMGRLKVGEINTTKK 931
           IASAGFKISRSK+  LISSGDVRVNW +I K+ T++KTGDI+SVS  GRLK+GEIN+TKK
Sbjct: 249 IASAGFKISRSKLVDLISSGDVRVNWTSITKNGTILKTGDIVSVSGKGRLKIGEINSTKK 308

Query: 932 GKFAVELITYL 964
           GKFAVELI Y+
Sbjct: 309 GKFAVELIRYV 319


>ref|XP_002316899.1| predicted protein [Populus trichocarpa] gi|222859964|gb|EEE97511.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  345 bits (886), Expect = 9e-93
 Identities = 180/268 (67%), Positives = 212/268 (79%), Gaps = 12/268 (4%)
 Frame = +2

Query: 197 LCQLAHTVKGDVHNLLG--DKNVFEDARRIVEMAKRASMRQQVLHTNFLTPPILKETKLV 370
           +C +A   KG+V  L G  DK+V E+ +RI++MA+RAS+R++VLHT+FLTPP LKE+  V
Sbjct: 1   MCHVAQATKGEVVALKGVEDKSVIEEVKRILDMARRASLRREVLHTDFLTPPTLKESLHV 60

Query: 371 LEKLADIRTIAQGGYPQAELCRLSVGHPEVLTTDPDIIAALSITGNFGFQPCSHGDFLGA 550
           LEKLAD++ IAQGGYPQAE CRLSVGHPE LT+DPDI+AALSITGNFGFQ CSHGDFLGA
Sbjct: 61  LEKLADVKAIAQGGYPQAERCRLSVGHPETLTSDPDIVAALSITGNFGFQLCSHGDFLGA 120

Query: 551 ILGTGISREKLGDII----------LQXXXXXXXXXXXXXVGNVSVSCKRIPLLALEYEP 700
           ILGTGI+R KLGDII          L              VG+VSVSC  IPL A+EYEP
Sbjct: 121 ILGTGIARNKLGDIIVLGGKRAQVLLVPDLVDYIVSSLDKVGDVSVSCTPIPLHAIEYEP 180

Query: 701 PRTMAFKSVEASLRVDAIASAGFKISRSKMAGLISSGDVRVNWITIFKSNTMIKTGDIIS 880
           PRT +FK+VEASLRVDA+ASAGFKISRSK+  LIS+ DVRVNW TI K+NT +KTGD++S
Sbjct: 181 PRTKSFKTVEASLRVDALASAGFKISRSKLVDLISNKDVRVNWTTITKNNTTLKTGDVVS 240

Query: 881 VSQMGRLKVGEINTTKKGKFAVELITYL 964
           VS  GRLK+GEINTT+KGKFAVELI YL
Sbjct: 241 VSGKGRLKIGEINTTRKGKFAVELIHYL 268


>emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]
          Length = 269

 Score =  344 bits (883), Expect = 2e-92
 Identities = 175/269 (65%), Positives = 211/269 (78%), Gaps = 13/269 (4%)
 Frame = +2

Query: 197 LCQLAHTVKGDVHNLL---GDKNVFEDARRIVEMAKRASMRQQVLHTNFLTPPILKETKL 367
           +C LA  +KGD ++LL    D++  E  + I+EMAKRAS R++VLHT+FLTPP+LKE+ +
Sbjct: 1   MCHLAQAMKGDANSLLKGVADRSTIEAVKHILEMAKRASARREVLHTDFLTPPVLKESMI 60

Query: 368 VLEKLADIRTIAQGGYPQAELCRLSVGHPEVLTTDPDIIAALSITGNFGFQPCSHGDFLG 547
           VLEKLAD++ +AQGGYPQAE CRLSVGH EVLTT PDI+AAL ITGNFGFQ CSHGDFLG
Sbjct: 61  VLEKLADMKAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGFQSCSHGDFLG 120

Query: 548 AILGTGISREKLGDIILQ----------XXXXXXXXXXXXXVGNVSVSCKRIPLLALEYE 697
           AILGTGI+REKLGDIILQ                       VGNVSVSC ++PLLALEYE
Sbjct: 121 AILGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEYE 180

Query: 698 PPRTMAFKSVEASLRVDAIASAGFKISRSKMAGLISSGDVRVNWITIFKSNTMIKTGDII 877
            PRT  FK++E SLRVDA+ASAGFK+SRSK+  LIS+GDVRVNW T+ K+ T +KTGD++
Sbjct: 181 EPRTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDVV 240

Query: 878 SVSQMGRLKVGEINTTKKGKFAVELITYL 964
           SVS  GRLK+GEIN+TKKGK+AVELI +L
Sbjct: 241 SVSGKGRLKIGEINSTKKGKYAVELIRFL 269