BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018497
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi...   288   2e-75
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...   285   1e-74
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   279   9e-73
ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|2...   279   9e-73
ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containi...   267   5e-69

>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like [Vitis vinifera]
          Length = 450

 Score =  288 bits (738), Expect = 2e-75
 Identities = 136/185 (73%), Positives = 162/185 (87%)
 Frame = -1

Query: 1250 LPSVATYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVG 1071
            LPSVATYNA IQVLCKKDNVENAI +FEEML+KGY+PN TTYNV+IRGLCHV +M++A+ 
Sbjct: 266  LPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAME 325

Query: 1070 YMDMMKKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMF 891
            +M  MK DECEPN+  YNVVIRY+CD+ E+EKGL +FE+MG   CLPNLDTYN+LISAMF
Sbjct: 326  FMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMF 385

Query: 890  VTKKSDDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFAREILRRQSKYGRIP 711
            V KKSD LL AG+LLIEMV+RGFLPR+FT+NRVL+GLLLTGNQ+FA+EILR QS+ GR+P
Sbjct: 386  VRKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGLLLTGNQDFAKEILRLQSRCGRLP 445

Query: 710  IHFKM 696
               K+
Sbjct: 446  RRLKL 450



 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 53/167 (31%), Positives = 85/167 (50%)
 Frame = -1

Query: 1235 TYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVGYMDMM 1056
            ++N ++ VLCK   VE A    +  L K +      + ++++G     ++ EA  +   M
Sbjct: 173  SFNTILDVLCKSKRVEMA----DNKLFKVFRGR---FRILLKGFFRAGQLKEAWEFFLQM 225

Query: 1055 KKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMFVTKKS 876
            KK +CE ++ TY  V+  +  +GEV K   +F  M G   LP++ TYN  I    V  K 
Sbjct: 226  KKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQ---VLCKK 282

Query: 875  DDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFAREILRR 735
            D++  A  +  EM+ +G++P   TYN V+ GL   G  E A E + R
Sbjct: 283  DNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMAR 329


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like [Cucumis sativus]
            gi|449487784|ref|XP_004157799.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  285 bits (730), Expect = 1e-74
 Identities = 135/185 (72%), Positives = 165/185 (89%)
 Frame = -1

Query: 1250 LPSVATYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVG 1071
            LPS ATYNA+IQVLCKKD+VENA+++FEEM+KKGYVPN+TTYNV+IRGL H   MD+A+ 
Sbjct: 319  LPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAME 378

Query: 1070 YMDMMKKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMF 891
            +++ MK D CEPN+ TYNV IRY+CD+G+VEKGL +FE+MG GS LPNLDTYNVLISAMF
Sbjct: 379  FIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGS-LPNLDTYNVLISAMF 437

Query: 890  VTKKSDDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFAREILRRQSKYGRIP 711
            V KKS+DL++AG+LL+EMVDRGF+PR+FT+NRVLNGLLLTGNQ FA+EILR QSK GR+P
Sbjct: 438  VRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKCGRLP 497

Query: 710  IHFKM 696
              FK+
Sbjct: 498  RQFKL 502



 Score =  100 bits (250), Expect = 6e-19
 Identities = 55/177 (31%), Positives = 92/177 (51%)
 Frame = -1

Query: 1241 VATYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVGYMD 1062
            V +YN +    C       A+ + +EM+++G  P +TTYN++++G     ++ EA  +  
Sbjct: 217  VVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFL 276

Query: 1061 MMKKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMFVTK 882
             MK+ E E ++ TY  ++  +   GE+++  ++F  M G   LP+  TYN +I    V  
Sbjct: 277  QMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQ---VLC 333

Query: 881  KSDDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFAREILRRQSKYGRIP 711
            K D +  A  +  EMV +G++P   TYN V+ GL   GN + A E + R    G  P
Sbjct: 334  KKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEP 390



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 38/179 (21%), Positives = 82/179 (45%)
 Frame = -1

Query: 1247 PSVATYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVGY 1068
            PS  T+  + +        + AI +F  M + G   ++ ++N I+  LC  ++++ A   
Sbjct: 145  PSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNN 204

Query: 1067 MDMMKKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMFV 888
            +  + + + + ++ +YN++   +C      K LE+ + M      P + TYN+L+   F 
Sbjct: 205  LFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYF- 263

Query: 887  TKKSDDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFAREILRRQSKYGRIP 711
              ++  L  A    ++M +R       TY  +++G  + G  + AR++       G +P
Sbjct: 264  --RAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILP 320



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 38/166 (22%), Positives = 74/166 (44%)
 Frame = -1

Query: 1244 SVATYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVGYM 1065
            S ++++  I +  +  + +    L   M  +   P+  T+ +I        K D A+   
Sbjct: 111  SASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVF 170

Query: 1064 DMMKKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMFVT 885
              M++  C  ++H++N ++   C S  VE       ++  G    ++ +YN++ +   + 
Sbjct: 171  LSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLI 230

Query: 884  KKSDDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFARE 747
            K++   L    +L EMV+RG  P   TYN +L G    G  + A E
Sbjct: 231  KRTPKAL---EVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWE 273


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  279 bits (714), Expect = 9e-73
 Identities = 125/185 (67%), Positives = 163/185 (88%)
 Frame = -1

Query: 1250 LPSVATYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVG 1071
            LPSVAT+NALIQ+LCKKD+VENAI++FEEM+K+GYVPN  TYN++IRGLCHV +M  A+ 
Sbjct: 298  LPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAME 357

Query: 1070 YMDMMKKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMF 891
             M+ M+ D+CEPN+ TYN++IRY+CD+GE+EKGL++F++MG G CLPNLDTYN+LI++MF
Sbjct: 358  LMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMF 417

Query: 890  VTKKSDDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFAREILRRQSKYGRIP 711
            V K SD+LL+AG+LL+EMVDRGFLPR+ T+NRVL+GLLLTGNQ+FA+EIL  Q   GR+P
Sbjct: 418  VRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDFAKEILSLQGGCGRLP 477

Query: 710  IHFKM 696
              FK+
Sbjct: 478  RKFKL 482



 Score =  101 bits (252), Expect = 3e-19
 Identities = 54/167 (32%), Positives = 91/167 (54%)
 Frame = -1

Query: 1235 TYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVGYMDMM 1056
            +YN ++   C       A+ + +EM+++G  PN+TTYN+++ G     + +EA G+   M
Sbjct: 198  SYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEM 257

Query: 1055 KKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMFVTKKS 876
            KK +C+ ++ TY  VI      GE+++   +F +M     LP++ T+N LI    +  K 
Sbjct: 258  KKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQ---ILCKK 314

Query: 875  DDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFAREILRR 735
            D +  A  +  EMV RG++P   TYN V+ GL   G  + A E++ R
Sbjct: 315  DSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMER 361


>ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|222868556|gb|EEF05687.1|
            predicted protein [Populus trichocarpa]
          Length = 491

 Score =  279 bits (714), Expect = 9e-73
 Identities = 131/185 (70%), Positives = 158/185 (85%)
 Frame = -1

Query: 1250 LPSVATYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVG 1071
            LPSVATYNA IQVLCKKDNV+NAIV+FEEM+ KGYVPN  TYN++IRGLCH  +M+ A+ 
Sbjct: 307  LPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAME 366

Query: 1070 YMDMMKKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMF 891
            +M  MK D CEPN+ TYN+VIRY+CD GE++K L++F++M  G CLPNLDTYN+LISAMF
Sbjct: 367  FMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMF 426

Query: 890  VTKKSDDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFAREILRRQSKYGRIP 711
            V KKSDDLL+AG LLIEMVDRGF+PR+FT+NRVLNGLLLTGNQ FA+EILR QS+ GR+ 
Sbjct: 427  VRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAKEILRLQSRCGRLT 486

Query: 710  IHFKM 696
               K+
Sbjct: 487  RKIKL 491



 Score =  103 bits (257), Expect = 9e-20
 Identities = 57/175 (32%), Positives = 95/175 (54%)
 Frame = -1

Query: 1235 TYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVGYMDMM 1056
            +YN ++   C       A+ + +EM+K+G  PN+T+YN +++G     +++EA  +   M
Sbjct: 207  SYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEM 266

Query: 1055 KKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMFVTKKS 876
            KK +CE ++ TY  VI  +  +GE+++  ++F+ M     LP++ TYN  I    V  K 
Sbjct: 267  KKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQ---VLCKK 323

Query: 875  DDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFAREILRRQSKYGRIP 711
            D++  A  +  EMV +G++P   TYN V+ GL   G  E A E + R    G  P
Sbjct: 324  DNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEP 378


>ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like [Glycine max]
          Length = 495

 Score =  267 bits (682), Expect = 5e-69
 Identities = 128/186 (68%), Positives = 160/186 (86%), Gaps = 1/186 (0%)
 Frame = -1

Query: 1250 LPSVATYNALIQVLCKKDNVENAIVLFEEMLKKGY-VPNVTTYNVIIRGLCHVEKMDEAV 1074
            +P+VATYNALIQVLCKKD+VENA+V+FEEM ++G  VPNV TYNV+IRGLCHV  M+ A+
Sbjct: 310  VPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERAL 369

Query: 1073 GYMDMMKKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAM 894
            G+M+ M +      + TYNVVIRY+CD+GEVEK LE+F +MG GSCLPNLDTYNVLISAM
Sbjct: 370  GFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAM 429

Query: 893  FVTKKSDDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFAREILRRQSKYGRI 714
            FV KKS+DL++AG+LL++MVDRGFLPR+FT+NRVLNGL++TGNQ+FA+EILR QS+ GRI
Sbjct: 430  FVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVITGNQDFAKEILRMQSRCGRI 489

Query: 713  PIHFKM 696
                K+
Sbjct: 490  VRRLKL 495



 Score = 91.3 bits (225), Expect = 5e-16
 Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 1/177 (0%)
 Frame = -1

Query: 1247 PSVATYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVGY 1068
            P   TYN L    C       A+ + +EM+++G  P + TYN +++G     ++ EA  +
Sbjct: 206  PDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEF 265

Query: 1067 MDMMKKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMFV 888
               MKK +CE ++ TY  VI  +  +G+V+K   +F  M     +PN+ TYN LI    V
Sbjct: 266  YLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQ---V 322

Query: 887  TKKSDDLLLAGRLLIEMVDRGF-LPRRFTYNRVLNGLLLTGNQEFAREILRRQSKYG 720
              K D +  A  +  EM   G  +P   TYN V+ GL   G+ E A   + R  ++G
Sbjct: 323  LCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHG 379



 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 46/172 (26%), Positives = 85/172 (49%)
 Frame = -1

Query: 1235 TYNALIQVLCKKDNVENAIVLFEEMLKKGYVPNVTTYNVIIRGLCHVEKMDEAVGYMDMM 1056
            ++N L+ +LCK   VE A  L + +  + + P+  TYN++  G C +++   A+  +  M
Sbjct: 176  SFNTLLDILCKSKRVETAHSLLKTLTSR-FRPDTVTYNILANGYCLIKRTPMALRVLKEM 234

Query: 1055 KKDECEPNIHTYNVVIRYYCDSGEVEKGLEIFERMGGGSCLPNLDTYNVLISAMFVTKKS 876
             +   EP + TYN +++ Y  S ++++  E +  M    C  ++ TY  +I    V   +
Sbjct: 235  VQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGV---A 291

Query: 875  DDLLLAGRLLIEMVDRGFLPRRFTYNRVLNGLLLTGNQEFAREILRRQSKYG 720
             D+  A R+  EMV  G +P   TYN ++  L    + E A  +    ++ G
Sbjct: 292  GDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREG 343