BLASTX nr result

ID: Lithospermum22_contig00018477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018477
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...   140   8e-32
emb|CBI34887.3| unnamed protein product [Vitis vinifera]              140   8e-32
emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]   140   8e-32
ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helica...   137   1e-30
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,...   135   3e-30

>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/80 (82%), Positives = 72/80 (90%)
 Frame = -3

Query: 241  PTGSGKTVLFELCILRLLSNFLSAEGTLNHIKGTLKTVYISPSKALVQEKLRDWNHKFGS 62
            PTGSGKTVLFELCILRLLS F+S EG   H+KGTLKT+YI+PSKALVQEKLRDWN K GS
Sbjct: 799  PTGSGKTVLFELCILRLLSRFISEEGRFIHVKGTLKTIYIAPSKALVQEKLRDWNQKLGS 858

Query: 61   WGINCLELTGDNEFYSLRNI 2
             GINCLELTGDNEFY++RNI
Sbjct: 859  LGINCLELTGDNEFYNIRNI 878


>emb|CBI34887.3| unnamed protein product [Vitis vinifera]
          Length = 1270

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/80 (82%), Positives = 72/80 (90%)
 Frame = -3

Query: 241 PTGSGKTVLFELCILRLLSNFLSAEGTLNHIKGTLKTVYISPSKALVQEKLRDWNHKFGS 62
           PTGSGKTVLFELCILRLLS F+S EG   H+KGTLKT+YI+PSKALVQEKLRDWN K GS
Sbjct: 51  PTGSGKTVLFELCILRLLSRFISEEGRFIHVKGTLKTIYIAPSKALVQEKLRDWNQKLGS 110

Query: 61  WGINCLELTGDNEFYSLRNI 2
            GINCLELTGDNEFY++RNI
Sbjct: 111 LGINCLELTGDNEFYNIRNI 130


>emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]
          Length = 1131

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/80 (82%), Positives = 72/80 (90%)
 Frame = -3

Query: 241 PTGSGKTVLFELCILRLLSNFLSAEGTLNHIKGTLKTVYISPSKALVQEKLRDWNHKFGS 62
           PTGSGKTVLFELCILRLLS F+S EG   H+KGTLKT+YI+PSKALVQEKLRDWN K GS
Sbjct: 51  PTGSGKTVLFELCILRLLSRFISEEGRFIHVKGTLKTIYIAPSKALVQEKLRDWNQKLGS 110

Query: 61  WGINCLELTGDNEFYSLRNI 2
            GINCLELTGDNEFY++RNI
Sbjct: 111 LGINCLELTGDNEFYNIRNI 130


>ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Glycine
           max]
          Length = 1195

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/80 (80%), Positives = 72/80 (90%)
 Frame = -3

Query: 241 PTGSGKTVLFELCILRLLSNFLSAEGTLNHIKGTLKTVYISPSKALVQEKLRDWNHKFGS 62
           PTGSGKTVLFELCILRLLS+F++AE    H+KG+LKT+YI+PSKALVQEKLRDWN KFG 
Sbjct: 48  PTGSGKTVLFELCILRLLSSFITAEERFLHLKGSLKTIYIAPSKALVQEKLRDWNKKFGP 107

Query: 61  WGINCLELTGDNEFYSLRNI 2
           WGINCLELTGDNE Y+ RNI
Sbjct: 108 WGINCLELTGDNESYTPRNI 127


>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 2000

 Score =  135 bits (340), Expect = 3e-30
 Identities = 65/80 (81%), Positives = 71/80 (88%)
 Frame = -3

Query: 241  PTGSGKTVLFELCILRLLSNFLSAEGTLNHIKGTLKTVYISPSKALVQEKLRDWNHKFGS 62
            PTGSGKTVLFELCILR+LS F+S EG  NHIKGTLKT+YI+PSKALVQEKLRDWN KFG 
Sbjct: 802  PTGSGKTVLFELCILRVLSRFIS-EGRFNHIKGTLKTIYIAPSKALVQEKLRDWNQKFGP 860

Query: 61   WGINCLELTGDNEFYSLRNI 2
             GINCLELTGDNEFY+ R +
Sbjct: 861  LGINCLELTGDNEFYNKRTV 880


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