BLASTX nr result
ID: Lithospermum22_contig00018460
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00018460
(627 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase... 142 6e-44
gb|AAG61120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase a... 142 2e-43
gb|AFD97617.1| rubisco activase (chloroplast) [Ammopiptanthus mo... 135 2e-42
ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase... 140 2e-42
ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase... 140 2e-42
>ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
chloroplastic-like [Vitis vinifera]
gi|297740331|emb|CBI30513.3| unnamed protein product
[Vitis vinifera]
Length = 474
Score = 142 bits (358), Expect(2) = 6e-44
Identities = 66/82 (80%), Positives = 74/82 (90%)
Frame = +1
Query: 379 QTSKDKWKGLAYDFSDDQQDITRGKGMVDSLFQAPMGDGTHVPIMNSYEYVSQGLRKYNL 558
QTSKDKWKGLA+D SDDQQDITRGKGMVDSLFQAPM GTH +M+SY+Y+S GLR+YNL
Sbjct: 65 QTSKDKWKGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNL 124
Query: 559 DNTVDGFYIAPAFMDKLVMWTT 624
DNT+DGFYIAPAFMDKLV+ T
Sbjct: 125 DNTMDGFYIAPAFMDKLVVHIT 146
Score = 61.2 bits (147), Expect(2) = 6e-44
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 104 AAVPTAGAVNRAAINLNGSGAGAPTTTSAFFGSSLKKVSPSLNLPKDTS-SFKVFAAATD 280
A + T GAVNRA +NLNGSG GA +SAF G+SLKKVS + P+ +S +FKV A
Sbjct: 3 ATISTLGAVNRAPLNLNGSGTGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEV-- 60
Query: 281 SGNEEVQT 304
+EE QT
Sbjct: 61 --DEEKQT 66
>gb|AAG61120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1
[Gossypium hirsutum]
Length = 438
Score = 142 bits (358), Expect(2) = 2e-43
Identities = 65/82 (79%), Positives = 73/82 (89%)
Frame = +1
Query: 379 QTSKDKWKGLAYDFSDDQQDITRGKGMVDSLFQAPMGDGTHVPIMNSYEYVSQGLRKYNL 558
QT +D+WKGLAYD SDDQQDITRGKGMVDSLFQAPM DGTH +M+SYEY+SQGLR Y+L
Sbjct: 68 QTDQDRWKGLAYDISDDQQDITRGKGMVDSLFQAPMNDGTHYAVMSSYEYISQGLRTYDL 127
Query: 559 DNTVDGFYIAPAFMDKLVMWTT 624
DN +DGFYIAPAFMDKLV+ T
Sbjct: 128 DNNMDGFYIAPAFMDKLVVHIT 149
Score = 59.3 bits (142), Expect(2) = 2e-43
Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +2
Query: 104 AAVPTAGAVNRAAINLNGSGAGAPTTTSAFFGSSLKKVSPSLNL--PKDTSSFKVFAA 271
AAV T GAVNRA ++LNGSGAGA +SAF G+SLKKVS N SFK+ AA
Sbjct: 3 AAVSTIGAVNRAPLSLNGSGAGASAPSSAFMGNSLKKVSARFNNNGKAPVGSFKIVAA 60
>gb|AFD97617.1| rubisco activase (chloroplast) [Ammopiptanthus mongolicus]
Length = 439
Score = 135 bits (341), Expect(2) = 2e-42
Identities = 63/82 (76%), Positives = 70/82 (85%)
Frame = +1
Query: 379 QTSKDKWKGLAYDFSDDQQDITRGKGMVDSLFQAPMGDGTHVPIMNSYEYVSQGLRKYNL 558
QT KD+WKG AYD SDDQQDITRGKGMVDSLFQAP GTH +++SYEY+S GLR+YNL
Sbjct: 67 QTDKDRWKGPAYDISDDQQDITRGKGMVDSLFQAPSDAGTHYAVLSSYEYISTGLREYNL 126
Query: 559 DNTVDGFYIAPAFMDKLVMWTT 624
DN VDGFYIAPAFMDKLV+ T
Sbjct: 127 DNNVDGFYIAPAFMDKLVVHIT 148
Score = 62.8 bits (151), Expect(2) = 2e-42
Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Frame = +2
Query: 104 AAVPTAGAVNRAAINLNGSGAGAPTTTSAFFGSSLKKVSPSL-NLPKDTS-SFKVFAAAT 277
A+V T GAVNR +NLNGSG GA +SAFFGS+LKKV+ L N K +S SFKV AA
Sbjct: 3 ASVSTVGAVNRTPLNLNGSGGGASVPSSAFFGSNLKKVASRLPNTTKVSSGSFKVVAAEI 62
Query: 278 DSGNE 292
D +
Sbjct: 63 DDSKQ 67
>ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
chloroplastic isoform 1 [Vitis vinifera]
gi|297746032|emb|CBI16088.3| unnamed protein product
[Vitis vinifera]
Length = 472
Score = 140 bits (352), Expect(2) = 2e-42
Identities = 65/82 (79%), Positives = 72/82 (87%)
Frame = +1
Query: 379 QTSKDKWKGLAYDFSDDQQDITRGKGMVDSLFQAPMGDGTHVPIMNSYEYVSQGLRKYNL 558
QT KD+WKGLAYD SDDQQDITRGKGMVDSLFQAPM GTH +M+SYEY+S GLR+YNL
Sbjct: 65 QTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNL 124
Query: 559 DNTVDGFYIAPAFMDKLVMWTT 624
DN +DGFYIAPAFMDKLV+ T
Sbjct: 125 DNNMDGFYIAPAFMDKLVVHIT 146
Score = 58.2 bits (139), Expect(2) = 2e-42
Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 110 VPTAGAVNRAAINLNGSGAGAPTTTSAFFGSSLKKVSPSLNLPKDTS-SFKVFAAATDSG 286
V T GAVNR ++LN SG GA +SAFFGSSLKKVS PK S SFKV A ++
Sbjct: 5 VSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENE 64
Query: 287 NEE 295
E
Sbjct: 65 QTE 67
>ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
chloroplastic isoform 2 [Vitis vinifera]
Length = 440
Score = 140 bits (352), Expect(2) = 2e-42
Identities = 65/82 (79%), Positives = 72/82 (87%)
Frame = +1
Query: 379 QTSKDKWKGLAYDFSDDQQDITRGKGMVDSLFQAPMGDGTHVPIMNSYEYVSQGLRKYNL 558
QT KD+WKGLAYD SDDQQDITRGKGMVDSLFQAPM GTH +M+SYEY+S GLR+YNL
Sbjct: 65 QTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNL 124
Query: 559 DNTVDGFYIAPAFMDKLVMWTT 624
DN +DGFYIAPAFMDKLV+ T
Sbjct: 125 DNNMDGFYIAPAFMDKLVVHIT 146
Score = 58.2 bits (139), Expect(2) = 2e-42
Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 110 VPTAGAVNRAAINLNGSGAGAPTTTSAFFGSSLKKVSPSLNLPKDTS-SFKVFAAATDSG 286
V T GAVNR ++LN SG GA +SAFFGSSLKKVS PK S SFKV A ++
Sbjct: 5 VSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENE 64
Query: 287 NEE 295
E
Sbjct: 65 QTE 67