BLASTX nr result

ID: Lithospermum22_contig00018454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018454
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321406.1| predicted protein [Populus trichocarpa] gi|1...    85   7e-15
ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
gb|ACJ84699.1| unknown [Medicago truncatula] gi|388518031|gb|AFK...    76   3e-12
ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula...    76   3e-12
ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    75   4e-12

>ref|XP_002321406.1| predicted protein [Populus trichocarpa] gi|118486267|gb|ABK94975.1|
           unknown [Populus trichocarpa]
           gi|222868402|gb|EEF05533.1| predicted protein [Populus
           trichocarpa]
          Length = 332

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/76 (53%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
 Frame = +2

Query: 269 GLDEEEVQHMNL---LAQFGSTSKSTLXXXXXXXXXXXXXXXXXLRPATSVHELLECPVC 439
           GLDE+E+ H NL   L QF S+    +                 + PATSVHELLECPVC
Sbjct: 14  GLDEDEIHHHNLQHHLHQFASSKPHNVNNNHNNGNTIVVGGPTAIAPATSVHELLECPVC 73

Query: 440 TSSMYPPIHQCHNGHT 487
           T+SMYPPIHQCHNGHT
Sbjct: 74  TNSMYPPIHQCHNGHT 89


>ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|222859096|gb|EEE96643.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/77 (53%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
 Frame = +2

Query: 269 GLDEEEVQHMNL----LAQFGSTSKSTLXXXXXXXXXXXXXXXXXLRPATSVHELLECPV 436
           GLDE+E+ H NL    L QF S     +                 + PATSVHELLECPV
Sbjct: 14  GLDEDEIHHHNLQHHHLHQFASPKPHNVNNNSNGIANVVGGPTV-IAPATSVHELLECPV 72

Query: 437 CTSSMYPPIHQCHNGHT 487
           CT+SMYPPIHQCHNGHT
Sbjct: 73  CTNSMYPPIHQCHNGHT 89


>gb|ACJ84699.1| unknown [Medicago truncatula] gi|388518031|gb|AFK47077.1| unknown
           [Medicago truncatula]
          Length = 335

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = +2

Query: 269 GLDEEEVQHMNLLAQFGS----TSKSTLXXXXXXXXXXXXXXXXXLRPATSVHELLECPV 436
           G+DE+E+QH  L          +  S+L                 + PATSVHELLECPV
Sbjct: 14  GMDEDEIQHRILHPHHQQHHHHSEFSSLKPRSGGNNNHGVIGSTAIAPATSVHELLECPV 73

Query: 437 CTSSMYPPIHQCHNGHT 487
           CT+SMYPPIHQCHNGHT
Sbjct: 74  CTNSMYPPIHQCHNGHT 90


>ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
           gi|158516792|gb|ABW70159.1| SINA1 [Medicago truncatula]
           gi|355477567|gb|AES58770.1| Ubiquitin ligase SINAT3
           [Medicago truncatula]
          Length = 333

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = +2

Query: 269 GLDEEEVQHMNLLAQFGS----TSKSTLXXXXXXXXXXXXXXXXXLRPATSVHELLECPV 436
           G+DE+E+QH  L          +  S+L                 + PATSVHELLECPV
Sbjct: 14  GMDEDEIQHRILHPHHQQHHHHSEFSSLKPRSGGNNNHGVIGSTAIAPATSVHELLECPV 73

Query: 437 CTSSMYPPIHQCHNGHT 487
           CT+SMYPPIHQCHNGHT
Sbjct: 74  CTNSMYPPIHQCHNGHT 90


>ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera]
           gi|297742353|emb|CBI34502.3| unnamed protein product
           [Vitis vinifera]
          Length = 316

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/73 (53%), Positives = 45/73 (61%)
 Frame = +2

Query: 269 GLDEEEVQHMNLLAQFGSTSKSTLXXXXXXXXXXXXXXXXXLRPATSVHELLECPVCTSS 448
           G+ EEE+ H +   QF S+SK                    + PATSVHELLECPVCT+S
Sbjct: 14  GIYEEEIHHHH--HQFSSSSKP-----------HSNVVSPAISPATSVHELLECPVCTNS 60

Query: 449 MYPPIHQCHNGHT 487
           MYPPIHQCHNGHT
Sbjct: 61  MYPPIHQCHNGHT 73


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