BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018449
         (1710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   568   e-159
ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3...   536   e-150
ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|2...   535   e-149
ref|XP_003595205.1| RecA [Medicago truncatula] gi|355484253|gb|A...   525   e-146
ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis tha...   525   e-146

>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Vitis vinifera] gi|297738654|emb|CBI27899.3| unnamed
            protein product [Vitis vinifera]
          Length = 421

 Score =  568 bits (1464), Expect = e-159
 Identities = 306/426 (71%), Positives = 341/426 (80%), Gaps = 3/426 (0%)
 Frame = +3

Query: 177  MARFMRNASSVGRSLFSSLHHLQGNRKGLFETT-QLSYFSAXXXXXXXXXXXXXXXXNLS 353
            MAR +RNASS+  SLF+    ++G RKG+  T+ Q   FS+                NLS
Sbjct: 1    MARLLRNASSLRHSLFA----VEGFRKGVLGTSSQFCNFSSKGRRRSKSDGSDSNEENLS 56

Query: 354  KKDLALRQALDQITSSFGKGAIMWLGRSATEREVPVVSTGSFALDIALGIGGFPKGRVIE 533
            KK+LALRQALDQIT+SFGKG+IMWLGRS + + VPVVSTGSFALDI LGIGG PKGRV+E
Sbjct: 57   KKELALRQALDQITTSFGKGSIMWLGRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRVVE 116

Query: 534  IYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPSLAESIGVNTGNLLLSQPDCGE 713
            IYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDP+LAE+IGVNT NLLLSQPDCGE
Sbjct: 117  IYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAEAIGVNTQNLLLSQPDCGE 176

Query: 714  QALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 893
            QALSLVDTLIRSG            LVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS
Sbjct: 177  QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 236

Query: 894  LSQTILIFINQVRSKLSTF-GFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGS 1070
            LSQTILIFINQVR+KLSTF GFGGPTEVTCGGNALKFYAS+RLNIKRIGLVKKGEET+GS
Sbjct: 237  LSQTILIFINQVRAKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 296

Query: 1071 QLLVKIVKNKHAPPFRTAQFELEFGKGINREAELIDLGVKHKFISK-SGAFYYMNDQTFR 1247
            Q+LVK+VKNKHAPPF+TAQFELEFGKGI RE+E+++LG KHKFI K  GA Y  N Q+FR
Sbjct: 297  QVLVKVVKNKHAPPFKTAQFELEFGKGICRESEIVELGCKHKFIIKGGGAMYSYNGQSFR 356

Query: 1248 GKDAIKRYLGENEPVQEELVAKLRHKLIDAENDKKRMAXXXXXXXXXXXXXSADTTDEEP 1427
            GKDAIK++L +NE  +EEL+ KLR KL+   N +K +                DTTDEE 
Sbjct: 357  GKDAIKQFLSQNESEREELMRKLREKLVGETNKEKELEAEAVDEDIAEGTVPPDTTDEE- 415

Query: 1428 VTAVEA 1445
            VTAVEA
Sbjct: 416  VTAVEA 421


>ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Glycine max]
          Length = 459

 Score =  536 bits (1382), Expect = e-150
 Identities = 288/437 (65%), Positives = 329/437 (75%), Gaps = 14/437 (3%)
 Frame = +3

Query: 177  MARFMRNASSVGRSLFSSLHHLQGNRKGLFETTQLSYFSAXXXXXXXXXXXXXXXXNLSK 356
            MAR +RN S + RSLF      +  + G+  T+Q+  FS+                N+SK
Sbjct: 27   MARLLRNTSLLTRSLFFP----KVFKLGMIGTSQILSFSSKGRRRSKSDGSDSGEENMSK 82

Query: 357  KDLALRQALDQITSSFGKGAIMWLGRSATEREVPVVSTGSFALDIALGIGGFPKGRVIEI 536
            K+LAL+QALDQITS+FGKG+IMWLGRS + + VPVVSTGSFALD+ALGIGG PKGRV+EI
Sbjct: 83   KELALQQALDQITSAFGKGSIMWLGRSVSPKNVPVVSTGSFALDVALGIGGLPKGRVVEI 142

Query: 537  YGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPSLAESIGVNTGNLLLSQPDCGEQ 716
            YGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALD +LAESIGVNT NLLLSQPDCGEQ
Sbjct: 143  YGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIGVNTTNLLLSQPDCGEQ 202

Query: 717  ALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 896
            ALSLVDTLIRSG            LVPKGELDGEMGDAHMAMQARLMSQALRKLSH+LSL
Sbjct: 203  ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHALSL 262

Query: 897  SQTILIFINQVRSKLSTF-GFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQ 1073
            SQTILIFINQVRSK+STF GF GPTEVTCGGNALKFYAS+RLNIKRIG VKKGEE +GSQ
Sbjct: 263  SQTILIFINQVRSKISTFGGFSGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEILGSQ 322

Query: 1074 LLVKIVKNKHAPPFRTAQFELEFGKGINREAELIDLGVKHKFISKSGAFYYMNDQTFRGK 1253
            +LVK+VKNK APPF+TA+FEL+FGKGI +E E+IDL V HK ISK+GA +Y N+ +FRGK
Sbjct: 323  VLVKVVKNKLAPPFKTAEFELQFGKGICKETEIIDLSVNHKLISKAGAMFYYNEHSFRGK 382

Query: 1254 DAIKRYLGENEPVQEELVAKLRHKLIDAENDKKR-------------MAXXXXXXXXXXX 1394
            DA+K +L EN    EEL  KLR KL++AE +K +                          
Sbjct: 383  DALKNFLAENRSALEELEMKLREKLLNAETEKMQESDVINGYVTEEIATVDSTNDNVTEK 442

Query: 1395 XXSADTTDEEPVTAVEA 1445
              + D+TDEE    VEA
Sbjct: 443  IATVDSTDEEAAAIVEA 459


>ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|222854260|gb|EEE91807.1|
            predicted protein [Populus trichocarpa]
          Length = 418

 Score =  535 bits (1378), Expect = e-149
 Identities = 284/424 (66%), Positives = 328/424 (77%), Gaps = 1/424 (0%)
 Frame = +3

Query: 177  MARFMRNASSVGRSLFSSLHHLQGNRKGLFET-TQLSYFSAXXXXXXXXXXXXXXXXNLS 353
            MAR +RNASS+ R+L +     +G R+G+  T TQ+  F+                 N+S
Sbjct: 1    MARLLRNASSLRRALVAP----EGIRRGVLGTSTQICNFATKGKRKSKSDGSESGEENMS 56

Query: 354  KKDLALRQALDQITSSFGKGAIMWLGRSATEREVPVVSTGSFALDIALGIGGFPKGRVIE 533
            KK+LAL+QALDQITS FGKGAIMW GRS   + VPVVSTGSFALDIALG GGFPKGRV+E
Sbjct: 57   KKELALQQALDQITSQFGKGAIMWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRVVE 116

Query: 534  IYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPSLAESIGVNTGNLLLSQPDCGE 713
            I+GPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALD SLA++IGVNT NLLLSQPDCGE
Sbjct: 117  IFGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGE 176

Query: 714  QALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 893
            QALSLVDTLIRSG            LVPK ELDGEMGDAHMAMQARLMSQALRKLSHSLS
Sbjct: 177  QALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLS 236

Query: 894  LSQTILIFINQVRSKLSTFGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQ 1073
             SQTIL+FINQVR+KLSTFGFGGPTEVTCGGNALKFYAS+RLNI+R+G +KKGEET G+Q
Sbjct: 237  QSQTILVFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRVGFIKKGEETTGTQ 296

Query: 1074 LLVKIVKNKHAPPFRTAQFELEFGKGINREAELIDLGVKHKFISKSGAFYYMNDQTFRGK 1253
            + VKIVKNK APPF+T QFELEFGKGI+RE+E+I+L +KHK I KSG+FY  N + + GK
Sbjct: 297  VQVKIVKNKLAPPFKTVQFELEFGKGISRESEIIELALKHKLIKKSGSFYDCNGKKYHGK 356

Query: 1254 DAIKRYLGENEPVQEELVAKLRHKLIDAENDKKRMAXXXXXXXXXXXXXSADTTDEEPVT 1433
            +A K +L  N+ VQEEL+ KLR KL++ E  ++ +              S D+TDEE V 
Sbjct: 357  EAFKEFLAHNDDVQEELMMKLREKLLEGETGQE-LGDESTDGEPTQEIISPDSTDEE-VA 414

Query: 1434 AVEA 1445
            A EA
Sbjct: 415  AAEA 418


>ref|XP_003595205.1| RecA [Medicago truncatula] gi|355484253|gb|AES65456.1| RecA [Medicago
            truncatula]
          Length = 424

 Score =  525 bits (1352), Expect = e-146
 Identities = 284/428 (66%), Positives = 327/428 (76%), Gaps = 5/428 (1%)
 Frame = +3

Query: 177  MARFMRNASSVGRSLFSSLHHLQG---NRKGLFETTQ-LSYFSAXXXXXXXXXXXXXXXX 344
            MAR +R+   + RS F   HHL     ++ G+  T+Q LS+ +                 
Sbjct: 1    MARLLRSTFFLNRSFFH--HHLPTRFCSKNGVLGTSQVLSFSTNKGKKRSKSDGSDSGEE 58

Query: 345  NLSKKDLALRQALDQITSSFGKGAIMWLGRSATEREVPVVSTGSFALDIALGIGGFPKGR 524
            N+SKKDLAL+QA+DQITS+FGKG+IMWLGR+ + + VPVVSTGSFALDIALGI G PKGR
Sbjct: 59   NMSKKDLALQQAMDQITSTFGKGSIMWLGRTVSPKNVPVVSTGSFALDIALGIFGLPKGR 118

Query: 525  VIEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPSLAESIGVNTGNLLLSQPD 704
            V+EI+GPEASGKTTLALHVIAEAQKQGGYC F+DAEHALD SLAESIGVNT NLLLSQPD
Sbjct: 119  VVEIFGPEASGKTTLALHVIAEAQKQGGYCAFIDAEHALDKSLAESIGVNTENLLLSQPD 178

Query: 705  CGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSH 884
            CGEQALSLVDTLIRSG            LVPKGELDGEMGDAHMAMQARLMSQALRKL H
Sbjct: 179  CGEQALSLVDTLIRSGSIDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCH 238

Query: 885  SLSLSQTILIFINQVRSKLSTF-GFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEET 1061
            SLSLSQ ILIFINQVRSK+STF GFGGPTEVTCGGNALKFY+S+RLNIKR+G VKKGEET
Sbjct: 239  SLSLSQCILIFINQVRSKISTFGGFGGPTEVTCGGNALKFYSSVRLNIKRVGFVKKGEET 298

Query: 1062 VGSQLLVKIVKNKHAPPFRTAQFELEFGKGINREAELIDLGVKHKFISKSGAFYYMNDQT 1241
            VGSQ+LVK+VKNKHAPPF+TAQFELEFGKGI REAE+I+L +KHKFI KSG+FY  N + 
Sbjct: 299  VGSQVLVKVVKNKHAPPFKTAQFELEFGKGICREAEIIELSIKHKFIKKSGSFYEYNGKN 358

Query: 1242 FRGKDAIKRYLGENEPVQEELVAKLRHKLIDAENDKKRMAXXXXXXXXXXXXXSADTTDE 1421
            + GKDA+K +L   + +Q +L  KLR KL++AE +    +             S D+TDE
Sbjct: 359  YHGKDALKSHLINGDGLQ-DLTTKLREKLLNAETETVSES-QEMVGDVTEEMLSPDSTDE 416

Query: 1422 EPVTAVEA 1445
            E     EA
Sbjct: 417  ETAVVAEA 424


>ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis thaliana]
            gi|209572665|sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA
            repair protein recA homolog 3, mitochondrial; AltName:
            Full=Recombinase A homolog 3; Flags: Precursor
            gi|119935859|gb|ABM06015.1| At2g19490 [Arabidopsis
            thaliana] gi|330251794|gb|AEC06888.1| DNA repair protein
            recA-like 3 [Arabidopsis thaliana]
          Length = 430

 Score =  525 bits (1351), Expect = e-146
 Identities = 284/418 (67%), Positives = 323/418 (77%), Gaps = 2/418 (0%)
 Frame = +3

Query: 177  MARFMRNASSVGRSLFSSLHHLQGNRKGLFETT-QLSYFSAXXXXXXXXXXXXXXXXNLS 353
            MAR +RN  S+  SLFSS    +  R+ +  T+ QL  F+A                 +S
Sbjct: 1    MARILRNVYSLRSSLFSS----ELLRRSVVGTSFQLRGFAAKAKKKSKSDGNGSSEEGMS 56

Query: 354  KKDLALRQALDQITSSFGKGAIMWLGRSATEREVPVVSTGSFALDIALGIGGFPKGRVIE 533
            KK++AL+QALDQITSSFGKG+IM+LGR+ + R VPV STGSFALD+ALG+GG PKGRV+E
Sbjct: 57   KKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVE 116

Query: 534  IYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPSLAESIGVNTGNLLLSQPDCGE 713
            IYGPEASGKTTLALHVIAEAQKQGG CVFVDAEHALD SLA++IGVNT NLLLSQPDCGE
Sbjct: 117  IYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGE 176

Query: 714  QALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 893
            QALSLVDTLIRSG            LVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLS
Sbjct: 177  QALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLS 236

Query: 894  LSQTILIFINQVRSKLSTF-GFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGS 1070
            LSQT+LIFINQVRSKLSTF GFGGPTEVTCGGNALKFYASMRLNIKRIGL+KKGEET GS
Sbjct: 237  LSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGS 296

Query: 1071 QLLVKIVKNKHAPPFRTAQFELEFGKGINREAELIDLGVKHKFISKSGAFYYMNDQTFRG 1250
            Q+ VKIVKNK APPFRTAQFELEFGKGI +  E+IDL +KHKFI+K+G FY +N + + G
Sbjct: 297  QVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNYHG 356

Query: 1251 KDAIKRYLGENEPVQEELVAKLRHKLIDAENDKKRMAXXXXXXXXXXXXXSADTTDEE 1424
            K+A+KR+L +NE  QEEL+ KL+ KLI  E   K                S D TD+E
Sbjct: 357  KEALKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLRVVVSPDNTDDE 414