BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018446
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   176   9e-57
gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-...   176   9e-57
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   166   2e-53
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   154   1e-50
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   144   2e-50

>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  176 bits (447), Expect(2) = 9e-57
 Identities = 87/163 (53%), Positives = 109/163 (66%)
 Frame = -3

Query: 795  VKRILRYVKAIIYLGLLITPSSQLTIQAFSDADWAGSSSDRRSTGGYVVYLGPNLVSWQY 616
            VKRILRY+K    LGL I  SS + +  +SDADWAG   DRRSTGG+ VYLG NLVSW  
Sbjct: 1252 VKRILRYIKQCTGLGLRICKSSSMIVSGYSDADWAGCLDDRRSTGGFAVYLGDNLVSWNA 1311

Query: 615  KKQRTVAHSFTESKYKSLANCSAEIXXXXXXXXXXXXXXXXXXXLWCENLGATYLSANPV 436
            KKQ TV+ S TE++YK+LAN +AEI                   LWC+N+GA YLS NPV
Sbjct: 1312 KKQATVSRSSTEAEYKALANATAEIMWVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPV 1371

Query: 435  LHVHTKHMEIDFHFVMEKLARKELQIQFISTKDLIANVLTKPL 307
             H  TKH+E+D+HFV E++ARK LQ+ ++ST D +A+  TK L
Sbjct: 1372 FHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTKAL 1414



 Score = 71.2 bits (173), Expect(2) = 9e-57
 Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
 Frame = -2

Query: 1039 GSLLLSQRHHITDLLVKANMLHCKPAVSPMSSFTTDFVASDA----PPDPTLYR*LVGSL 872
            G +L+SQ  + +DLL + NM  CK   +P+S+ +   +A       P D T YR +VG+L
Sbjct: 1162 GGILMSQEKYASDLLKRVNMSDCKSVATPLSA-SEKLIAGKGTILGPNDATQYRSIVGAL 1220

Query: 871  *YLTLTRPDLSYAVNRVCQHMHDP 800
             YLTLTR D++++VN+VCQ +H+P
Sbjct: 1221 QYLTLTRLDIAFSVNKVCQFLHNP 1244


>gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 352

 Score =  176 bits (447), Expect(2) = 9e-57
 Identities = 87/163 (53%), Positives = 109/163 (66%)
 Frame = -3

Query: 795 VKRILRYVKAIIYLGLLITPSSQLTIQAFSDADWAGSSSDRRSTGGYVVYLGPNLVSWQY 616
           VKRILRY+K    LGL I  SS + +  +SDADWAG   DRRSTGG+ VYLG NLVSW  
Sbjct: 167 VKRILRYIKQCTGLGLRICKSSSMIVSGYSDADWAGCLDDRRSTGGFAVYLGDNLVSWNA 226

Query: 615 KKQRTVAHSFTESKYKSLANCSAEIXXXXXXXXXXXXXXXXXXXLWCENLGATYLSANPV 436
           KKQ TV+ S TE++YK+LAN +AEI                   LWC+N+GA YLS NPV
Sbjct: 227 KKQATVSRSSTEAEYKALANATAEIMWVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPV 286

Query: 435 LHVHTKHMEIDFHFVMEKLARKELQIQFISTKDLIANVLTKPL 307
            H  TKH+E+D+HFV E++ARK LQ+ ++ST D +A+  TK L
Sbjct: 287 FHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTKAL 329



 Score = 71.2 bits (173), Expect(2) = 9e-57
 Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
 Frame = -2

Query: 1039 GSLLLSQRHHITDLLVKANMLHCKPAVSPMSSFTTDFVASDA----PPDPTLYR*LVGSL 872
            G +L+SQ  + +DLL + NM  CK   +P+S+ +   +A       P D T YR +VG+L
Sbjct: 77   GGILMSQEKYASDLLKRVNMSDCKSVATPLSA-SEKLIAGKGTILGPNDATQYRSIVGAL 135

Query: 871  *YLTLTRPDLSYAVNRVCQHMHDP 800
             YLTLTR D++++VN+VCQ +H+P
Sbjct: 136  QYLTLTRLDIAFSVNKVCQFLHNP 159


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  166 bits (419), Expect(2) = 2e-53
 Identities = 83/191 (43%), Positives = 120/191 (62%), Gaps = 1/191 (0%)
 Frame = -3

Query: 798 MVKRILRYVKAIIYLGLLITPSSQLTIQAFSDADWAGSSSDRRSTGGYVVYLGPNLVSWQ 619
           +VKR+LRY+K  ++ GL   PSS L + A++DADWA    DRRST GY ++ G NLVSW 
Sbjct: 140 VVKRVLRYLKGSLFYGLSFQPSSSLDLIAYTDADWASCPDDRRSTSGYCIFFGGNLVSWS 199

Query: 618 YKKQRTVAHSFTESKYKSLANCSAEIXXXXXXXXXXXXXXXXXXXLWCENLGATYLSANP 439
             KQ+ V+ S TES+Y+ LAN +AE+                   L+C+NL  TYL+ANP
Sbjct: 200 ASKQKVVSRSSTESEYRGLANAAAELTWIQSLLKELFIPLFQPPVLYCDNLSTTYLAANP 259

Query: 438 VLHVHTKHMEIDFHFVMEKLARKELQIQFISTKDLIANVLTKPLSGTRY-SFRDKLRLHS 262
           +LH   KH+EID+HFV E++ +K L ++F+ ++D +A++LTK LS   +   R KL + S
Sbjct: 260 ILHSRAKHVEIDYHFVRERVLQKTLDVRFLPSEDQVADILTKSLSTQHFLHLRSKLTVLS 319

Query: 261 RSPSACAGSIR 229
           R P    G ++
Sbjct: 320 R-PVCLRGDVK 329



 Score = 70.9 bits (172), Expect(2) = 2e-53
 Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = -2

Query: 1036 SLLLSQRHHITDLLVKANMLHCKPAVSPMSSFTTDFVASDAP-PDPTLYR*LVGSL*YLT 860
            SL LSQ  +I D L +A +   K   SPM++     +A      DPTLYR LVG+L Y T
Sbjct: 54   SLHLSQAKYICDFLQRAGLSESKSMASPMAAGPVLSIADGTRLEDPTLYRSLVGALQYCT 113

Query: 859  LTRPDLSYAVNRVCQHMHDPNGKTH 785
            +TRPD++Y VN++CQ MH P   TH
Sbjct: 114  ITRPDIAYTVNKLCQFMHAPT-STH 137


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  154 bits (389), Expect(2) = 1e-50
 Identities = 81/180 (45%), Positives = 112/180 (62%), Gaps = 1/180 (0%)
 Frame = -3

Query: 795  VKRILRYVKAIIYLGLLITPSSQLTIQAFSDADWAGSSSDRRSTGGYVVYLGPNLVSWQY 616
            VKRILRY+K  I  GLL+ PS+  TIQA++DADW     DRRS+ GY+VYLG NLVSW  
Sbjct: 1195 VKRILRYLKGTITHGLLLQPSAHFTIQAYTDADWGAQPDDRRSSSGYLVYLGNNLVSWTA 1254

Query: 615  KKQRTVAHSFTESKYKSLANCSAEIXXXXXXXXXXXXXXXXXXXLWCENLGATYLSANPV 436
             KQ+ V+ S  ES+Y+ LA  +AEI                   L+ +N+ A Y++ NPV
Sbjct: 1255 SKQKVVSRSSAESEYRGLAIATAEIIWTQALLRELCISITSIPTLYYDNISAYYMAKNPV 1314

Query: 435  LHVHTKHMEIDFHFVMEKLARKELQIQFISTKDLIANVLTKPLSGTRY-SFRDKLRLHSR 259
             H  TKH+EID HF+ +++   +LQ+Q+I + D  A++LTK L+ +R+ S R  L L  R
Sbjct: 1315 FHARTKHIEIDLHFIRDQVLHNKLQLQYIPSTDQPADILTKHLTSSRFLSLRSHLCLVPR 1374



 Score = 73.2 bits (178), Expect(2) = 1e-50
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = -2

Query: 1039 GSLLLSQRHHITDLLVKANMLHCKPAVSPMS-SFTTDFVASDAPPDPTLYR*LVGSL*YL 863
            GSL LSQR +ITDLL + +ML  K A +P +   +      D   D T+YR +VG+L Y 
Sbjct: 1107 GSLHLSQRKYITDLLQRTSMLDSKAAATPGTVGLSLSQFDGDLMDDVTMYRSVVGALQYA 1166

Query: 862  TLTRPDLSYAVNRVCQHMHDPNGKTH 785
            TLTRPD+++++N+ CQ MH P   TH
Sbjct: 1167 TLTRPDIAFSINKACQFMHRPT-STH 1191


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  144 bits (362), Expect(2) = 2e-50
 Identities = 80/195 (41%), Positives = 118/195 (60%), Gaps = 11/195 (5%)
 Frame = -3

Query: 801  LMVKRILRYVKAIIYLGLLITPSSQL-------TIQAFSDADWAGSSSDRRSTGGYVVYL 643
            ++VKRILRY+   +  GLL+   S +       ++ AFSDADWAG+  D  ST  Y+VYL
Sbjct: 1162 VLVKRILRYLCGTLDKGLLLYRDSSIPLHGFSDSLHAFSDADWAGNKDDYSSTSAYLVYL 1221

Query: 642  GPNLVSWQYKKQRTVAHSFTESKYKSLANCSAEIXXXXXXXXXXXXXXXXXXXLWCENLG 463
            G NLVSW  KKQ+TVA S TE++Y+S+A  +AE+                   ++C+N+G
Sbjct: 1222 GRNLVSWSSKKQQTVARSSTEAEYRSVAATAAELCWVGSLLSDLGIKFTTSPVVYCDNVG 1281

Query: 462  ATYLSANPVLHVHTKHMEIDFHFVMEKLARKELQIQFISTKDLIANVLTKPLSGTRYS-- 289
            AT LS+NP+ H   KH+ ID+HF+ +++    L++  +S+ D +A++LTKPL    YS  
Sbjct: 1282 ATQLSSNPIFHSRMKHVAIDYHFIRDQVQSGLLRVAHVSSADQLADLLTKPL--PTYSQF 1339

Query: 288  --FRDKLRLHSRSPS 250
               RDK+ L +R  S
Sbjct: 1340 LLLRDKIGLSTRGLS 1354



 Score = 82.4 bits (202), Expect(2) = 2e-50
 Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
 Frame = -2

Query: 1033 LLLSQRHHITDLLVKANMLHCKPAVSPMSSFTTDFVASDAPP--DPTLYR*LVGSL*YLT 860
            +LLSQR +I DLL++ NM   KP ++P+ + +T    +   P  DPT YR  VGSL YL+
Sbjct: 1077 ILLSQRRYIQDLLIRTNMADAKPVLTPLPTSSTAISLTSGTPLSDPTPYRAAVGSLQYLS 1136

Query: 859  LTRPDLSYAVNRVCQHMHDPNGK 791
            LTRPD+S+AVNR+ Q MH P  +
Sbjct: 1137 LTRPDISFAVNRMAQFMHQPTSE 1159