BLASTX nr result

ID: Lithospermum22_contig00018419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018419
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulg...    59   5e-07
emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]    58   7e-07
dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]                 55   6e-06

>ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435087|ref|YP_004222305.1| hypothetical
           protein BevumaM_p070 [Beta vulgaris subsp. maritima]
           gi|346683178|ref|YP_004842110.1| hypothetical protein
           BemaM_p065 [Beta macrocarpa] gi|9049278|dbj|BAA99288.1|
           orf114a [Beta vulgaris subsp. vulgaris]
           gi|317905640|emb|CBJ14041.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439820|emb|CBJ17532.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500096|emb|CBX24914.1| hypothetical protein [Beta
           macrocarpa] gi|384977899|emb|CBL54123.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 114

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/40 (70%), Positives = 30/40 (75%)
 Frame = -1

Query: 257 LVKIPIVIHFPKDPGFRTLVGLQDPFDDLCCEEGIYI*SD 138
           L  + I IHF  DPGFR LVGL+DPFDDLCC EGI I SD
Sbjct: 3   LCTLRIGIHFLTDPGFRALVGLRDPFDDLCCVEGISICSD 42


>emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]
          Length = 142

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/67 (55%), Positives = 42/67 (62%), Gaps = 8/67 (11%)
 Frame = +1

Query: 139 SD*IYIPSSQHRSSKGSWRPTKVRKPGSFGKWITIGILTSQPSKFRTLT--------ILL 294
           SD I IPS+QHRSSKGS RPTK RK GSF KWI I  + ++  K  TLT        I L
Sbjct: 75  SDHIDIPSTQHRSSKGSRRPTKARKSGSFRKWIPIRRVHNRMDKL-TLTRQFGIHFGIFL 133

Query: 295 GWWHEGI 315
           G + EGI
Sbjct: 134 GRYREGI 140


>dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]
          Length = 174

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/59 (55%), Positives = 38/59 (64%)
 Frame = +1

Query: 139 SD*IYIPSSQHRSSKGSWRPTKVRKPGSFGKWITIGILTSQPSKFRTLTILLGWWHEGI 315
           S+ I IPS+QHRSSKGS RPTK RKPGS  KWI I  + ++  K  TLT   G    GI
Sbjct: 106 SEHIDIPSTQHRSSKGSRRPTKARKPGSVRKWIPIRRVHNRMDKL-TLTRQFGMIQFGI 163


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