BLASTX nr result

ID: Lithospermum22_contig00018308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018308
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277915.1| PREDICTED: mitochondrial import inner membra...   123   3e-26
ref|XP_002518947.1| Mitochondrial import inner membrane transloc...   113   3e-23
ref|XP_004145880.1| PREDICTED: mitochondrial import inner membra...   110   3e-22
ref|NP_001053653.1| Os04g0581300 [Oryza sativa Japonica Group] g...   108   9e-22
ref|NP_001151715.1| pale aleurone color1 [Zea mays] gi|194706278...   108   1e-21

>ref|XP_002277915.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim13 [Vitis vinifera] gi|297742475|emb|CBI34624.3|
           unnamed protein product [Vitis vinifera]
          Length = 89

 Score =  123 bits (308), Expect = 3e-26
 Identities = 63/89 (70%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
 Frame = +1

Query: 118 MDSFS--APSSGSDHKMSTDQFMDQIKTQLAQAYAEEFLETVRGKCFEKCITKPXXXXXX 291
           MDSFS  +PSSGS  +MST+ FMDQ+KTQLAQAYAEEFLETVRGKCFEKCITKP      
Sbjct: 1   MDSFSTHSPSSGSSPQMSTEDFMDQLKTQLAQAYAEEFLETVRGKCFEKCITKPGSSLSG 60

Query: 292 XXXXXXXRCVDRYIEATGIVSRALFSSQR 378
                  RCVDRYIEATGI+S+ALFS+ R
Sbjct: 61  SESSCISRCVDRYIEATGIISKALFSAPR 89


>ref|XP_002518947.1| Mitochondrial import inner membrane translocase subunit Tim13,
           putative [Ricinus communis] gi|223541934|gb|EEF43480.1|
           Mitochondrial import inner membrane translocase subunit
           Tim13, putative [Ricinus communis]
          Length = 88

 Score =  113 bits (283), Expect = 3e-23
 Identities = 57/86 (66%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
 Frame = +1

Query: 118 MDSFSAPSS-GSDHKMSTDQFMDQIKTQLAQAYAEEFLETVRGKCFEKCITKPXXXXXXX 294
           MD+FS+PSS G+  ++ST   MDQ+KTQLAQAYA+EFLETVRGKCF+KCITKP       
Sbjct: 1   MDTFSSPSSIGTGSQVSTSDLMDQVKTQLAQAYAQEFLETVRGKCFDKCITKPGSSLSGS 60

Query: 295 XXXXXXRCVDRYIEATGIVSRALFSS 372
                 RCVDRYIEATGIVSRALF++
Sbjct: 61  ESSCISRCVDRYIEATGIVSRALFNA 86


>ref|XP_004145880.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim13-like [Cucumis sativus]
           gi|449516954|ref|XP_004165511.1| PREDICTED:
           mitochondrial import inner membrane translocase subunit
           Tim13-like [Cucumis sativus]
          Length = 87

 Score =  110 bits (274), Expect = 3e-22
 Identities = 54/85 (63%), Positives = 64/85 (75%)
 Frame = +1

Query: 118 MDSFSAPSSGSDHKMSTDQFMDQIKTQLAQAYAEEFLETVRGKCFEKCITKPXXXXXXXX 297
           MDSFS+PSSGS  + S ++F DQ+KTQLAQAYAEEFLET+R KCF+KCITKP        
Sbjct: 1   MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 298 XXXXXRCVDRYIEATGIVSRALFSS 372
                RC++RYIEAT IVSRALF +
Sbjct: 61  SSCISRCMERYIEATSIVSRALFKT 85


>ref|NP_001053653.1| Os04g0581300 [Oryza sativa Japonica Group]
           gi|38345874|emb|CAD41171.2| OSJNBa0064M23.16 [Oryza
           sativa Japonica Group] gi|113565224|dbj|BAF15567.1|
           Os04g0581300 [Oryza sativa Japonica Group]
           gi|116311011|emb|CAH67944.1| H0303A11-B0406H05.4 [Oryza
           sativa Indica Group] gi|218195420|gb|EEC77847.1|
           hypothetical protein OsI_17100 [Oryza sativa Indica
           Group] gi|222629421|gb|EEE61553.1| hypothetical protein
           OsJ_15898 [Oryza sativa Japonica Group]
          Length = 86

 Score =  108 bits (270), Expect = 9e-22
 Identities = 57/87 (65%), Positives = 62/87 (71%)
 Frame = +1

Query: 118 MDSFSAPSSGSDHKMSTDQFMDQIKTQLAQAYAEEFLETVRGKCFEKCITKPXXXXXXXX 297
           MDSFS+PSS      ST+  M+QIK QLAQAYA+EFLETV  KCF KC+TKP        
Sbjct: 1   MDSFSSPSSAGS-TASTEHLMEQIKAQLAQAYAQEFLETVGNKCFAKCVTKPGTSLSGSE 59

Query: 298 XXXXXRCVDRYIEATGIVSRALFSSQR 378
                RCVDRYIEATGIVSRALFSSQR
Sbjct: 60  SSCISRCVDRYIEATGIVSRALFSSQR 86


>ref|NP_001151715.1| pale aleurone color1 [Zea mays] gi|194706278|gb|ACF87223.1| unknown
           [Zea mays] gi|195649267|gb|ACG44101.1| mitochondrial
           import inner membrane translocase subunit Tim13 [Zea
           mays] gi|413938266|gb|AFW72817.1| import inner membrane
           translocase subunit Tim13 [Zea mays]
          Length = 87

 Score =  108 bits (269), Expect = 1e-21
 Identities = 56/87 (64%), Positives = 62/87 (71%)
 Frame = +1

Query: 118 MDSFSAPSSGSDHKMSTDQFMDQIKTQLAQAYAEEFLETVRGKCFEKCITKPXXXXXXXX 297
           MDSFS+  S S    + D  M+QIKTQLAQAYA+EFLETV  KCFEKC+TKP        
Sbjct: 1   MDSFSSSPSSSGPGANPDVVMEQIKTQLAQAYAQEFLETVGNKCFEKCVTKPGSSLSGSE 60

Query: 298 XXXXXRCVDRYIEATGIVSRALFSSQR 378
                RCVDRYIEATGIVSRALF+SQR
Sbjct: 61  SSCISRCVDRYIEATGIVSRALFTSQR 87


Top