BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018296
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD89599.1| RNA polymerase II, second largest subunit [Borag...   270   1e-70
emb|CAD89598.1| RNA polymerase II, second largest subunit [Borag...   269   2e-70
gb|AAT69107.1| RNA polymerase II [Ipomoea pes-tigridis]               268   3e-70
gb|AAT69129.1| RNA polymerase II [Poranopsis paniculata]              268   3e-70
gb|AAT69114.1| RNA polymerase II [Hildebrandtia valo]                 268   3e-70

>emb|CAD89599.1| RNA polymerase II, second largest subunit [Borago officinalis]
          Length = 355

 Score =  270 bits (689), Expect = 1e-70
 Identities = 132/146 (90%), Positives = 138/146 (94%)
 Frame = +1

Query: 1   CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRAEEKKMGTLVKEDFGRPDRANTMGMIYG 180
           CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR EEKKM TLV+EDFGRPDRANTMGM +G
Sbjct: 57  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMETLVREDFGRPDRANTMGMRHG 116

Query: 181 SYDKLDDDGLAPPGTRVAGDDVIIGKTTPINQEEAQGQGYHYTRRDHSTSVRHGESGMVD 360
           SYDKLDDDGLAPPGTRVAG+DVIIGKTTPINQ+EAQGQ   YTRRDHSTS+RH E+GMVD
Sbjct: 117 SYDKLDDDGLAPPGTRVAGEDVIIGKTTPINQDEAQGQASRYTRRDHSTSMRHSENGMVD 176

Query: 361 QVLLTTNADGLRFAKVRMRSVRIPQI 438
           QVLLTTNADGLRF KVRMRSVRIPQI
Sbjct: 177 QVLLTTNADGLRFVKVRMRSVRIPQI 202


>emb|CAD89598.1| RNA polymerase II, second largest subunit [Borago officinalis]
          Length = 355

 Score =  269 bits (688), Expect = 2e-70
 Identities = 132/146 (90%), Positives = 137/146 (93%)
 Frame = +1

Query: 1   CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRAEEKKMGTLVKEDFGRPDRANTMGMIYG 180
           CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR  EKKMGTLVKEDFGRPDRANTMGM +G
Sbjct: 57  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDXEKKMGTLVKEDFGRPDRANTMGMRHG 116

Query: 181 SYDKLDDDGLAPPGTRVAGDDVIIGKTTPINQEEAQGQGYHYTRRDHSTSVRHGESGMVD 360
           SYDKLDDDGLAPPGTRVAG+DVIIG TTPINQ+EAQGQ   YTRRDHSTS+RH E+GMVD
Sbjct: 117 SYDKLDDDGLAPPGTRVAGEDVIIGXTTPINQDEAQGQASRYTRRDHSTSMRHSENGMVD 176

Query: 361 QVLLTTNADGLRFAKVRMRSVRIPQI 438
           QVLLTTNADGLRF KVRMRSVRIPQI
Sbjct: 177 QVLLTTNADGLRFVKVRMRSVRIPQI 202


>gb|AAT69107.1| RNA polymerase II [Ipomoea pes-tigridis]
          Length = 215

 Score =  268 bits (685), Expect = 3e-70
 Identities = 130/146 (89%), Positives = 139/146 (95%)
 Frame = +1

Query: 1   CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRAEEKKMGTLVKEDFGRPDRANTMGMIYG 180
           CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR EEKKMGTLVKEDFGRPDRANTMGM +G
Sbjct: 2   CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHG 61

Query: 181 SYDKLDDDGLAPPGTRVAGDDVIIGKTTPINQEEAQGQGYHYTRRDHSTSVRHGESGMVD 360
           SYDKLDDDGLAPPGTRV+G+DVIIGKTTPI+QE+AQGQ   YT+RDHSTS+RH E+GMVD
Sbjct: 62  SYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEDAQGQAARYTKRDHSTSLRHSETGMVD 121

Query: 361 QVLLTTNADGLRFAKVRMRSVRIPQI 438
           QVLLTTNADGLRF KVR+RSVRIPQI
Sbjct: 122 QVLLTTNADGLRFVKVRVRSVRIPQI 147


>gb|AAT69129.1| RNA polymerase II [Poranopsis paniculata]
          Length = 221

 Score =  268 bits (685), Expect = 3e-70
 Identities = 130/146 (89%), Positives = 139/146 (95%)
 Frame = +1

Query: 1   CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRAEEKKMGTLVKEDFGRPDRANTMGMIYG 180
           CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR EEKKMGTLVKEDFGRPDRANTMGM +G
Sbjct: 4   CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHG 63

Query: 181 SYDKLDDDGLAPPGTRVAGDDVIIGKTTPINQEEAQGQGYHYTRRDHSTSVRHGESGMVD 360
           SYDKLDDDGLAPPGTRV+G+DVIIGKTTPI+QE+AQGQ   YT+RDHSTS+RH E+GMVD
Sbjct: 64  SYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEDAQGQAARYTKRDHSTSLRHSETGMVD 123

Query: 361 QVLLTTNADGLRFAKVRMRSVRIPQI 438
           QVLLTTNADGLRF KVR+RSVRIPQI
Sbjct: 124 QVLLTTNADGLRFVKVRVRSVRIPQI 149


>gb|AAT69114.1| RNA polymerase II [Hildebrandtia valo]
          Length = 222

 Score =  268 bits (685), Expect = 3e-70
 Identities = 130/146 (89%), Positives = 139/146 (95%)
 Frame = +1

Query: 1   CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRAEEKKMGTLVKEDFGRPDRANTMGMIYG 180
           CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR EEKKMGTLVKEDFGRPDRANTMGM +G
Sbjct: 8   CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHG 67

Query: 181 SYDKLDDDGLAPPGTRVAGDDVIIGKTTPINQEEAQGQGYHYTRRDHSTSVRHGESGMVD 360
           SYDKLDDDGLAPPGTRV+G+DVIIGKTTPI+Q+EAQGQ   YT+RDHSTS+RH E+GMVD
Sbjct: 68  SYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQSARYTKRDHSTSLRHSETGMVD 127

Query: 361 QVLLTTNADGLRFAKVRMRSVRIPQI 438
           QVLLTTNADGLRF KVR+RSVRIPQI
Sbjct: 128 QVLLTTNADGLRFVKVRVRSVRIPQI 153