BLASTX nr result

ID: Lithospermum22_contig00018295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018295
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   135   2e-67
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ...   112   5e-23
emb|CBI40707.3| unnamed protein product [Vitis vinifera]              110   4e-22
ref|YP_002608378.1| ribosomal protein S10 [Vitis vinifera] gi|20...    97   6e-18
gb|AFK42314.1| unknown [Lotus japonicus]                               95   3e-17

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477385|gb|AES58588.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 1152

 Score =  135 bits (340), Expect(3) = 2e-67
 Identities = 89/166 (53%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
 Frame = +3

Query: 435  FPFRFTECDLGHDGSLRASVGKRSPEYSTRSP-FLAAMGSTCEQGKPNGNQKTGGT--AL 605
            FPFRFTECDLGHDG LRASVGKRSPEYSTRSP FLAAMGSTC+QGKPNGNQK  GT   L
Sbjct: 957  FPFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQGKPNGNQKREGTTLTL 1016

Query: 606  GRRRSKKRRLTQLKEGALEAYLIIKRGKGQPINLIRRKGVR*ARGSLLPSRPGREESRDL 785
            GRRRSKKRRLT LK  +  A     RG  + + ++        R   + S  GR      
Sbjct: 1017 GRRRSKKRRLTLLKLASKPAR---PRGIKRSLPVLTWISGDGKRRPEVTSSRGRS----- 1068

Query: 786  CRC*LGSRVTE*VGQKXXXXXXXXXXLADRLAVSLATAKRLPSTKE 923
                                      L DRLAVSLATAKRLPS K+
Sbjct: 1069 ------------------------LALGDRLAVSLATAKRLPSAKD 1090



 Score = 92.0 bits (227), Expect(3) = 2e-67
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +1

Query: 1    PYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQFWVIKTETHE 144
            PYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKK++ VIKTE HE
Sbjct: 861  PYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKKYLVIKTEKHE 908



 Score = 77.4 bits (189), Expect(3) = 2e-67
 Identities = 36/48 (75%), Positives = 41/48 (85%)
 Frame = +2

Query: 212  QKDCRLDAPTPPCLALFFTLRRKRRYEAWERMQEVYDTTGNLKEWRQT 355
            QKDCR +APTPPCLAL+ TLR  R Y AWER++EV DTTGNLKEWRQ+
Sbjct: 910  QKDCRQNAPTPPCLALYLTLRI-RGYAAWERIKEVSDTTGNLKEWRQS 956


>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
           gi|355477358|gb|AES58561.1| hypothetical protein
           MTR_1g005810 [Medicago truncatula]
          Length = 146

 Score =  112 bits (279), Expect(2) = 5e-23
 Identities = 53/58 (91%), Positives = 54/58 (93%)
 Frame = -2

Query: 535 RKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHLSAPLVDRCGFTKRLSTVHSR 362
           +KGDLVLYSG  FPTEARK PSCPRSHSVNRKGKPTH SAPLVDRCGFTKRLSTVHSR
Sbjct: 89  KKGDLVLYSGIFFPTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGFTKRLSTVHSR 146



 Score = 22.7 bits (47), Expect(2) = 5e-23
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 552 STPWQQEK 529
           STPWQQEK
Sbjct: 82  STPWQQEK 89



 Score = 65.5 bits (158), Expect(2) = 7e-10
 Identities = 32/34 (94%), Positives = 32/34 (94%)
 Frame = -3

Query: 837 VASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYL 736
           V SGRL PSPEIQVSTGKDLLIPRGRAGLEASYL
Sbjct: 47  VTSGRLFPSPEIQVSTGKDLLIPRGRAGLEASYL 80



 Score = 25.0 bits (53), Expect(2) = 7e-10
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -2

Query: 922 SFVLGKRFAVAK 887
           SF LGKRFAVAK
Sbjct: 19  SFALGKRFAVAK 30


>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  110 bits (276), Expect = 4e-22
 Identities = 52/56 (92%), Positives = 52/56 (92%)
 Frame = +3

Query: 429 VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGG 596
           VGF FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQKTGG
Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGG 570


>ref|YP_002608378.1| ribosomal protein S10 [Vitis vinifera] gi|209954175|emb|CAQ77627.1|
           ribosomal protein S10 [Vitis vinifera]
           gi|239764725|gb|ACS15196.1| ribosomal protein S10 [Vitis
           vinifera]
          Length = 120

 Score = 97.1 bits (240), Expect = 6e-18
 Identities = 47/48 (97%), Positives = 47/48 (97%)
 Frame = +1

Query: 1   PYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQFWVIKTETHE 144
           PYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQF VIKTETHE
Sbjct: 26  PYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQFLVIKTETHE 73


>gb|AFK42314.1| unknown [Lotus japonicus]
          Length = 89

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 46/48 (95%), Positives = 46/48 (95%)
 Frame = +1

Query: 1   PYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQFWVIKTETHE 144
           PYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQF VIKTE HE
Sbjct: 26  PYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQFLVIKTEKHE 73


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