BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018289
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog ...   236   8e-60
ref|XP_002531657.1| X-ray repair cross complementing protein 3, ...   230   3e-58
ref|XP_002324475.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56
ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog ...   224   3e-56
emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]   224   3e-56

>ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog [Cucumis sativus]
           gi|449506730|ref|XP_004162832.1| PREDICTED: DNA repair
           protein XRCC3 homolog [Cucumis sativus]
          Length = 294

 Score =  236 bits (601), Expect = 8e-60
 Identities = 136/282 (48%), Positives = 173/282 (61%), Gaps = 22/282 (7%)
 Frame = +1

Query: 43  KISLGCPILDHLLHGGVPMNTLTELVAESGVGKTQLCLQLLFITQYP----PLSGAAVYL 210
           K + GCPI+D  + GGV  ++LTE+VAESG GKTQLCLQL    Q P     L+ +++Y+
Sbjct: 15  KCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYI 74

Query: 211 HSELPFPFRRLHQL----ALQHPSLQNPLVNVFIEPLYDAHQLFDKMSKLEFMLSRGGXX 378
           H+E PFPFRRL QL    +  +P   NP  ++F+EP++ AHQLFD M K+E  L      
Sbjct: 75  HTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDIMPKIESSLEN---R 131

Query: 379 XXXXXXXXXXIDSIAALFRSEYGNNREDLMTRSKMFFEISSRLKAMAVKYGXXXXXXXXX 558
                     IDSIAALFRS++ N   DL  RS +FF+IS +LK +A KY          
Sbjct: 132 NSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQV 191

Query: 559 XXXM-DSDG-----VGNSECLVSSGRRVSPALGLSWTHCVNVRLFLYRQYERVVGEGESV 720
              M  SDG     +GN + L SS RRV PALGL+W +CVN RLFL R  E VVGEGE +
Sbjct: 192 VDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN-EEVVGEGEGM 250

Query: 721 --------EFETRRFIRVVFAPHLPDSSCEFVIKREGVIGID 822
                      TRR++ VVFAPHLP SSCE+VI REGV+G++
Sbjct: 251 MNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVE 292


>ref|XP_002531657.1| X-ray repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis] gi|223528715|gb|EEF30727.1| X-ray
           repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis]
          Length = 301

 Score =  230 bits (587), Expect = 3e-58
 Identities = 138/289 (47%), Positives = 173/289 (59%), Gaps = 29/289 (10%)
 Frame = +1

Query: 43  KISLGCPILDHLLHGGVPMNTLTELVAESGVGKTQLCLQLLFITQYP----PLSGAAVYL 210
           K +LGCPILD  L+GG+P N++TE+VAESG GKTQLCLQL    Q P     LS +++YL
Sbjct: 15  KCTLGCPILDRCLNGGIPCNSITEIVAESGTGKTQLCLQLSLYAQLPLSLGGLSASSLYL 74

Query: 211 HSELPFPFRRLHQLA----LQHPSL-------------QNPLVNVFIEPLYDAHQLFDKM 339
           H+E PFPFRRLHQL+     QHP +              NP  N+F+  +  A  LFD M
Sbjct: 75  HTEFPFPFRRLHQLSHSFQSQHPQIFINNNNNDTINNYDNPCDNIFVHSVRSADYLFDIM 134

Query: 340 SKLEFMLSRGGXXXXXXXXXXXXIDSIAALFRSEYGNNREDLMTRSKMFFEISSRLKAMA 519
            K+E  L                IDS+AALFRSE+ N   DL  RS +FF+IS++L+A+A
Sbjct: 135 PKIESFLV---YSKTHLPVRLIVIDSVAALFRSEFENTATDLKRRSALFFKISAKLRALA 191

Query: 520 VKYGXXXXXXXXXXXXMDS-DG-----VGNSECLVSSGRRVSPALGLSWTHCVNVRLFLY 681
            ++             + S DG     +G+   L SSGRRV PALGL+W +CVN RLFL 
Sbjct: 192 WRFNLAVVVSNQVVDFVGSGDGLNGARIGDLGSLYSSGRRVCPALGLAWANCVNSRLFLS 251

Query: 682 RQYERVVGEGESVEF--ETRRFIRVVFAPHLPDSSCEFVIKREGVIGID 822
           R    +V   ES  F  +TRR + VVFAPHLP SSCEFVI+REGV GID
Sbjct: 252 RDENGMVDGAESGSFCSQTRRRLHVVFAPHLPYSSCEFVIRREGVFGID 300


>ref|XP_002324475.1| predicted protein [Populus trichocarpa] gi|222865909|gb|EEF03040.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  224 bits (571), Expect = 2e-56
 Identities = 133/283 (46%), Positives = 177/283 (62%), Gaps = 22/283 (7%)
 Frame = +1

Query: 43  KISLGCPILDHLLHGGVPMNTLTELVAESGVGKTQLCLQLLFITQYPP----LSGAAVYL 210
           K SLGCPILD  + GG+P N++TE+VAESG GKTQLCLQL    Q PP    LS +++YL
Sbjct: 11  KCSLGCPILDCCMGGGIPCNSITEIVAESGSGKTQLCLQLSLRAQLPPFLGGLSASSLYL 70

Query: 211 HSELPFPFRRLHQLA----LQHPSL----QNPLVNVFIEPLYDAHQLFDKMSKLEFMLSR 366
           ++E PFP RRLHQL+     Q+P +     +P  ++F++ +  A QL D M ++E  L  
Sbjct: 71  YTEFPFPTRRLHQLSSALQCQYPQIFVSNYDPCDSIFLQSVNTADQLLDIMPQVESFLEN 130

Query: 367 GGXXXXXXXXXXXXIDSIAALFRSEYGNNREDLMTRSKMFFEISSRLKAMAVKYGXXXXX 546
                         IDS+AALFR+E+ N   DL+ RS +FF+IS +LK  A ++      
Sbjct: 131 S---KTRLPVRVIVIDSMAALFRAEFENTASDLIRRSSLFFKISGKLKEFAKRFNLVVLV 187

Query: 547 XXXXXXXMDSD------GVGNSECLVSSGRRVSPALGLSWTHCVNVRLFLYR-QYER-VV 702
                  +DS        +GN   + SSGRRV PALGLSW +CVN RLFL + +YE  +V
Sbjct: 188 TNQVMDVVDSGEGLNEVRIGNLSGMYSSGRRVCPALGLSWANCVNSRLFLSKDEYESGLV 247

Query: 703 GEGES--VEFETRRFIRVVFAPHLPDSSCEFVIKREGVIGIDQ 825
           G GES  +  ETRR + VVFAPHLPD SCEFVI+REGV+G+++
Sbjct: 248 GGGESGFLSRETRRRLHVVFAPHLPDLSCEFVIRREGVVGVNR 290


>ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog [Vitis vinifera]
          Length = 300

 Score =  224 bits (570), Expect = 3e-56
 Identities = 136/287 (47%), Positives = 170/287 (59%), Gaps = 26/287 (9%)
 Frame = +1

Query: 43  KISLGCPILDHLLHGGVPMNTLTELVAESGVGKTQLCLQLLFITQYPP----LSGAAVYL 210
           K +LGCPILD  L GGVP N++TELVAESG GKTQLCLQL+   Q P     L+ +++Y+
Sbjct: 17  KCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLGGLAASSLYI 76

Query: 211 HSELPFPFRRLHQLALQH--------PSLQNPLVNVFIEPLYDAHQLFDKMSKLEFMLSR 366
           HSE PFP RRL QL+            S  NPL  V +  +  A QLFD + K++ +L R
Sbjct: 77  HSEFPFPSRRLQQLSQSFRSSYSHVLDSEYNPLDFVLVRGVQSADQLFDVLLKMDSVLLR 136

Query: 367 GGXXXXXXXXXXXXIDSIAALFRSEYGNNREDLMTRSKMFFEISSRLKAMAVKYGXXXXX 546
                         IDSIAALFR E+ N   DL  RS +FF+IS +LKA+A ++G     
Sbjct: 137 ---PPTQLPVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGKLKALAERFGLAVVV 193

Query: 547 XXXXXXXMDSDG------VGNSECLVSSGRRVSPALGLSWTHCVNVRLFLYRQYERV--- 699
                  +   G      VGN   L SSGRRV  ALGLSW +CVN RLFL R  E V   
Sbjct: 194 TNQVVDFVGQAGGLNGLRVGNLGSLWSSGRRVCAALGLSWANCVNSRLFLSRNEEIVGEV 253

Query: 700 -----VGEGESVEFETRRFIRVVFAPHLPDSSCEFVIKREGVIGIDQ 825
                VG G++V   TRR + V+FAPHLP+SSCEFVI REGV+G+++
Sbjct: 254 TGLGGVGAGDTVSRLTRRHLHVIFAPHLPESSCEFVISREGVLGVER 300


>emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]
          Length = 2077

 Score =  224 bits (570), Expect = 3e-56
 Identities = 136/287 (47%), Positives = 170/287 (59%), Gaps = 26/287 (9%)
 Frame = +1

Query: 43   KISLGCPILDHLLHGGVPMNTLTELVAESGVGKTQLCLQLLFITQYPP----LSGAAVYL 210
            K +LGCPILD  L GGVP N++TELVAESG GKTQLCLQL+   Q P     L+ +++Y+
Sbjct: 1794 KCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLGGLAASSLYI 1853

Query: 211  HSELPFPFRRLHQLALQH--------PSLQNPLVNVFIEPLYDAHQLFDKMSKLEFMLSR 366
            HSE PFP RRL QL+            S  NPL  V +  +  A QLFD + K++ +L R
Sbjct: 1854 HSEFPFPSRRLQQLSQSFRSSYSHVLDSEYNPLDFVLVRGVQSADQLFDVLLKMDSVLLR 1913

Query: 367  GGXXXXXXXXXXXXIDSIAALFRSEYGNNREDLMTRSKMFFEISSRLKAMAVKYGXXXXX 546
                          IDSIAALFR E+ N   DL  RS +FF+IS +LKA+A ++G     
Sbjct: 1914 ---PPTQLPVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGKLKALAERFGLAVVV 1970

Query: 547  XXXXXXXMDSDG------VGNSECLVSSGRRVSPALGLSWTHCVNVRLFLYRQYERV--- 699
                   +   G      VGN   L SSGRRV  ALGLSW +CVN RLFL R  E V   
Sbjct: 1971 TNQVVDFVGQAGGLNGLRVGNLGSLWSSGRRVCAALGLSWANCVNSRLFLSRNEEIVXEV 2030

Query: 700  -----VGEGESVEFETRRFIRVVFAPHLPDSSCEFVIKREGVIGIDQ 825
                 VG G++V   TRR + V+FAPHLP+SSCEFVI REGV+G+++
Sbjct: 2031 TGLGGVGAGDTVSRLTRRHLHVIFAPHLPESSCEFVISREGVLGVER 2077