BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018271
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACS93668.1| RNA polymerase C [Myosotis sylvatica]                  201   4e-50
gb|ACN75519.1| RNA polymerase C [Quiina guianensis]                   200   9e-50
gb|ACN75516.1| RNA polymerase C [Lacunaria crenata] gi|224987535...   200   9e-50
gb|AGG09512.1| RNA polymerase subunit C, partial (chloroplast) [...   199   2e-49
gb|AEG67152.1| RNA polymerase C [Hypoxis aurea]                       199   2e-49

>gb|ACS93668.1| RNA polymerase C [Myosotis sylvatica]
          Length = 173

 Score =  201 bits (512), Expect = 4e-50
 Identities = 101/109 (92%), Positives = 104/109 (95%)
 Frame = -1

Query: 327 KEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQAFVIRGLIRQHLASN 148
           KEGRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQ FVIRGLIRQHLASN
Sbjct: 2   KEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASN 61

Query: 147 IGVAKSKIREKEPVVWEILQEVMHGHPVLLNRATTMDRFGI*AFQPVLV 1
           IGVAKSKIREKEP+VWEILQEVMHGHPVLLNRA T+ R GI AFQPVLV
Sbjct: 62  IGVAKSKIREKEPIVWEILQEVMHGHPVLLNRAPTLHRLGIQAFQPVLV 110


>gb|ACN75519.1| RNA polymerase C [Quiina guianensis]
          Length = 194

 Score =  200 bits (509), Expect = 9e-50
 Identities = 99/109 (90%), Positives = 104/109 (95%)
 Frame = -1

Query: 327 KEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQAFVIRGLIRQHLASN 148
           KEGRFRET+LGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQ FVIRGLIRQHLASN
Sbjct: 26  KEGRFRETMLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASN 85

Query: 147 IGVAKSKIREKEPVVWEILQEVMHGHPVLLNRATTMDRFGI*AFQPVLV 1
           IGVAKSKIREKEP+VWEILQEVMHGHPVLLNRA T+ R GI AFQP+LV
Sbjct: 86  IGVAKSKIREKEPIVWEILQEVMHGHPVLLNRAPTLHRLGIQAFQPILV 134


>gb|ACN75516.1| RNA polymerase C [Lacunaria crenata] gi|224987535|gb|ACN75517.1|
           RNA polymerase C [Lacunaria crenata]
           gi|224987537|gb|ACN75518.1| RNA polymerase C [Lacunaria
           cf. crenata MAG-2009]
          Length = 194

 Score =  200 bits (509), Expect = 9e-50
 Identities = 99/109 (90%), Positives = 104/109 (95%)
 Frame = -1

Query: 327 KEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQAFVIRGLIRQHLASN 148
           KEGRFRET+LGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQ FVIRGLIRQHLASN
Sbjct: 26  KEGRFRETMLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASN 85

Query: 147 IGVAKSKIREKEPVVWEILQEVMHGHPVLLNRATTMDRFGI*AFQPVLV 1
           IGVAKSKIREKEP+VWEILQEVMHGHPVLLNRA T+ R GI AFQP+LV
Sbjct: 86  IGVAKSKIREKEPIVWEILQEVMHGHPVLLNRAPTLHRLGIQAFQPILV 134


>gb|AGG09512.1| RNA polymerase subunit C, partial (chloroplast) [Ulva prolifera]
          Length = 124

 Score =  199 bits (506), Expect = 2e-49
 Identities = 100/109 (91%), Positives = 103/109 (94%)
 Frame = -1

Query: 327 KEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQAFVIRGLIRQHLASN 148
           KEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQ FVIRGLIRQH+ASN
Sbjct: 15  KEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASN 74

Query: 147 IGVAKSKIREKEPVVWEILQEVMHGHPVLLNRATTMDRFGI*AFQPVLV 1
           IGVAKSKIREKEP+VWEILQEVM GHPVLLNRA T+ R GI AFQPVLV
Sbjct: 75  IGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLV 123


>gb|AEG67152.1| RNA polymerase C [Hypoxis aurea]
          Length = 191

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/109 (90%), Positives = 103/109 (94%)
 Frame = -1

Query: 327 KEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQAFVIRGLIRQHLASN 148
           KEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQ FVIRGLIRQHLASN
Sbjct: 24  KEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHLASN 83

Query: 147 IGVAKSKIREKEPVVWEILQEVMHGHPVLLNRATTMDRFGI*AFQPVLV 1
           IG+AKSKIREKEP+VWEILQEVM GHPVLLNRA T+ R GI AFQP+LV
Sbjct: 84  IGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILV 132