BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018243
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22025.3| unnamed protein product [Vitis vinifera]              371   e-100
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   371   e-100
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   351   1e-94
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   318   1e-84
ref|XP_002514539.1| pentatricopeptide repeat-containing protein,...   290   3e-76

>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  371 bits (953), Expect = e-100
 Identities = 184/289 (63%), Positives = 222/289 (76%)
 Frame = -3

Query: 868 TSTFTELCSQGHLKEAFKNFTTHIWSNPSLFSHLLKSCIXXXXXXXXXXXXXLIVTSGSH 689
           T+ FT LCS+GHLK+AF  F++HIWS PSLFSHLL+SCI             LI+TSG  
Sbjct: 25  TAEFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCS 84

Query: 688 RVKFVRNHLLNTYSKLGELDIALSLFDKMPYRNVMSCNILIGGFIQIGELGHAIDLFDQM 509
             KF+ NHLLN YSK G+LD A++LF  MP +N+MSCNILI G+ + G+   A  +FD+M
Sbjct: 85  SDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEM 144

Query: 508 TRRNLASWNAMVTGCIQFGFNEEGLDYFLEMHKVGFLPDVFTVGSVLRGCAGSKELNKGR 329
             RN+A+WNAMV G IQF FNEEGL  F  M+++GFLPD F +GSVLRGCAG + L  GR
Sbjct: 145 PERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGR 204

Query: 328 QVHGYVVKSGLGYSLVVCGSLAHMYMKGGSLGEGEKIIKSMPVRSVAICNTLIAGKAQNG 149
           QVHGYV K G  ++LVV  SLAHMYMK GSLGEGE++I++MP ++V   NTLIAG+AQNG
Sbjct: 205 QVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNG 264

Query: 148 YAEGALEQYNMMKMAGFRPDEITFVSVLSSCSELATLGQGQQIHAEMTK 2
           Y E  L+QYNMMKMAGFRPD+ITFVSV+SSCSELATLGQGQQIHAE+ K
Sbjct: 265 YPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIK 313



 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 55/188 (29%), Positives = 93/188 (49%)
 Frame = -3

Query: 592 NVMSCNILIGGFIQIGELGHAIDLFDQMTRRNLASWNAMVTGCIQFGFNEEGLDYFLEMH 413
           N++  + L   +++ G LG    L   M  +N+ +WN ++ G  Q G+ EE LD +  M 
Sbjct: 218 NLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMK 277

Query: 412 KVGFLPDVFTVGSVLRGCAGSKELNKGRQVHGYVVKSGLGYSLVVCGSLAHMYMKGGSLG 233
             GF PD  T  SV+  C+    L +G+Q+H  V+K+G    + V  SL  MY + G L 
Sbjct: 278 MAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLE 337

Query: 232 EGEKIIKSMPVRSVAICNTLIAGKAQNGYAEGALEQYNMMKMAGFRPDEITFVSVLSSCS 53
              K+        V   +++IA    +G    A++ +N M+      +++TF+S+L +CS
Sbjct: 338 YSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACS 397

Query: 52  ELATLGQG 29
                 +G
Sbjct: 398 HCGLKEKG 405


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  371 bits (953), Expect = e-100
 Identities = 184/289 (63%), Positives = 222/289 (76%)
 Frame = -3

Query: 868 TSTFTELCSQGHLKEAFKNFTTHIWSNPSLFSHLLKSCIXXXXXXXXXXXXXLIVTSGSH 689
           T+ FT LCS+GHLK+AF  F++HIWS PSLFSHLL+SCI             LI+TSG  
Sbjct: 25  TAEFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCS 84

Query: 688 RVKFVRNHLLNTYSKLGELDIALSLFDKMPYRNVMSCNILIGGFIQIGELGHAIDLFDQM 509
             KF+ NHLLN YSK G+LD A++LF  MP +N+MSCNILI G+ + G+   A  +FD+M
Sbjct: 85  SDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEM 144

Query: 508 TRRNLASWNAMVTGCIQFGFNEEGLDYFLEMHKVGFLPDVFTVGSVLRGCAGSKELNKGR 329
             RN+A+WNAMV G IQF FNEEGL  F  M+++GFLPD F +GSVLRGCAG + L  GR
Sbjct: 145 PERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGR 204

Query: 328 QVHGYVVKSGLGYSLVVCGSLAHMYMKGGSLGEGEKIIKSMPVRSVAICNTLIAGKAQNG 149
           QVHGYV K G  ++LVV  SLAHMYMK GSLGEGE++I++MP ++V   NTLIAG+AQNG
Sbjct: 205 QVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNG 264

Query: 148 YAEGALEQYNMMKMAGFRPDEITFVSVLSSCSELATLGQGQQIHAEMTK 2
           Y E  L+QYNMMKMAGFRPD+ITFVSV+SSCSELATLGQGQQIHAE+ K
Sbjct: 265 YPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIK 313



 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 55/188 (29%), Positives = 93/188 (49%)
 Frame = -3

Query: 592 NVMSCNILIGGFIQIGELGHAIDLFDQMTRRNLASWNAMVTGCIQFGFNEEGLDYFLEMH 413
           N++  + L   +++ G LG    L   M  +N+ +WN ++ G  Q G+ EE LD +  M 
Sbjct: 218 NLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMK 277

Query: 412 KVGFLPDVFTVGSVLRGCAGSKELNKGRQVHGYVVKSGLGYSLVVCGSLAHMYMKGGSLG 233
             GF PD  T  SV+  C+    L +G+Q+H  V+K+G    + V  SL  MY + G L 
Sbjct: 278 MAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLE 337

Query: 232 EGEKIIKSMPVRSVAICNTLIAGKAQNGYAEGALEQYNMMKMAGFRPDEITFVSVLSSCS 53
              K+        V   +++IA    +G    A++ +N M+      +++TF+S+L +CS
Sbjct: 338 YSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACS 397

Query: 52  ELATLGQG 29
                 +G
Sbjct: 398 HCGLKEKG 405


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  351 bits (901), Expect = 1e-94
 Identities = 176/290 (60%), Positives = 215/290 (74%)
 Frame = -3

Query: 871 STSTFTELCSQGHLKEAFKNFTTHIWSNPSLFSHLLKSCIXXXXXXXXXXXXXLIVTSGS 692
           S   FT LC+ G +K+A+  FT+ IWS+PSLFSHLL+SCI             LI+TSG 
Sbjct: 34  SLQEFTSLCNDGRIKQAYDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGG 93

Query: 691 HRVKFVRNHLLNTYSKLGELDIALSLFDKMPYRNVMSCNILIGGFIQIGELGHAIDLFDQ 512
            + KF+ NHLLN YSKLG+   +L LF  MP RNVMS NILI G++Q+G+L  A  LFD+
Sbjct: 94  SKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDE 153

Query: 511 MTRRNLASWNAMVTGCIQFGFNEEGLDYFLEMHKVGFLPDVFTVGSVLRGCAGSKELNKG 332
           M+ RN+A+WNAM+ G  QF FN++ L  F EM+ +GFLPD FT+GSVLRGCAG + L  G
Sbjct: 154 MSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAG 213

Query: 331 RQVHGYVVKSGLGYSLVVCGSLAHMYMKGGSLGEGEKIIKSMPVRSVAICNTLIAGKAQN 152
           ++VH  ++K G   S VV  SLAHMY+K GSL +GEK+IKSMP+R+V   NTLIAGKAQN
Sbjct: 214 QEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQN 273

Query: 151 GYAEGALEQYNMMKMAGFRPDEITFVSVLSSCSELATLGQGQQIHAEMTK 2
           G  E  L QYNMMKMAGFRPD+ITFVSVLS+CSELATLGQGQQIHAE+ K
Sbjct: 274 GCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIK 323



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 59/186 (31%), Positives = 90/186 (48%)
 Frame = -3

Query: 559 FIQIGELGHAIDLFDQMTRRNLASWNAMVTGCIQFGFNEEGLDYFLEMHKVGFLPDVFTV 380
           +I+ G L     L   M  R + +WN ++ G  Q G  EE L+ +  M   GF PD  T 
Sbjct: 239 YIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITF 298

Query: 379 GSVLRGCAGSKELNKGRQVHGYVVKSGLGYSLVVCGSLAHMYMKGGSLGEGEKIIKSMPV 200
            SVL  C+    L +G+Q+H  V+K+G    L V  SL  MY + G L +  K       
Sbjct: 299 VSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDREN 358

Query: 199 RSVAICNTLIAGKAQNGYAEGALEQYNMMKMAGFRPDEITFVSVLSSCSELATLGQGQQI 20
             V + +++IA    +G  E ALE ++ M+      +E+TF+S+L +CS      +G + 
Sbjct: 359 FDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEY 418

Query: 19  HAEMTK 2
              M K
Sbjct: 419 FDLMVK 424


>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  318 bits (814), Expect = 1e-84
 Identities = 161/286 (56%), Positives = 206/286 (72%)
 Frame = -3

Query: 859 FTELCSQGHLKEAFKNFTTHIWSNPSLFSHLLKSCIXXXXXXXXXXXXXLIVTSGSHRVK 680
           F  LCS+GH++EAF++F + IW+ P LFS+LL++CI             LI TSG    K
Sbjct: 45  FATLCSKGHIREAFESFLSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDK 104

Query: 679 FVRNHLLNTYSKLGELDIALSLFDKMPYRNVMSCNILIGGFIQIGELGHAIDLFDQMTRR 500
           F+ NHLLN YSK GEL  A++LFD+MP RN+MSCNI+I  ++ +G L  A +LFD+M  R
Sbjct: 105 FISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDR 164

Query: 499 NLASWNAMVTGCIQFGFNEEGLDYFLEMHKVGFLPDVFTVGSVLRGCAGSKELNKGRQVH 320
           N+A+WNAMVTG  +F  NEE L  F  M+++ F+PD +++GSVLRGCA    L  G+QVH
Sbjct: 165 NVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVH 224

Query: 319 GYVVKSGLGYSLVVCGSLAHMYMKGGSLGEGEKIIKSMPVRSVAICNTLIAGKAQNGYAE 140
            YV+K G   +LVV  SLAHMYMK GS+ +GE++I  MP  S+   NTL++GKAQ GY E
Sbjct: 225 AYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFE 284

Query: 139 GALEQYNMMKMAGFRPDEITFVSVLSSCSELATLGQGQQIHAEMTK 2
           G L+QY MMKMAGFRPD+ITFVSV+SSCSELA L QG+QIHAE  K
Sbjct: 285 GVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVK 330



 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
 Frame = -3

Query: 580 CNILIGG-----FIQIGELGHAIDLFDQMTRRNLASWNAMVTGCIQFGFNEEGLDYFLEM 416
           CN+++G      +++ G +     + + M   +L +WN +++G  Q G+ E  LD +  M
Sbjct: 234 CNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMM 293

Query: 415 HKVGFLPDVFTVGSVLRGCAGSKELNKGRQVHGYVVKSGLGYSLVVCGSLAHMYMKGGSL 236
              GF PD  T  SV+  C+    L +G+Q+H   VK+G    + V  SL  MY + G L
Sbjct: 294 KMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCL 353

Query: 235 GEGEKIIKSMPVRSVAICNTLIAGKAQNGYAEGALEQYNMMKMAGFRPDEITFVSVLSSC 56
            +  K       R V + +++IA    +G  E A++ +N M+      +EITF+S+L +C
Sbjct: 354 QDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYAC 413

Query: 55  SELATLGQGQQIHAEMTK 2
           S      +G  +   M K
Sbjct: 414 SHCGLKDKGLGLFDMMVK 431


>ref|XP_002514539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546143|gb|EEF47645.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 332

 Score =  290 bits (742), Expect = 3e-76
 Identities = 141/217 (64%), Positives = 173/217 (79%)
 Frame = -3

Query: 652 YSKLGELDIALSLFDKMPYRNVMSCNILIGGFIQIGELGHAIDLFDQMTRRNLASWNAMV 473
           YSK+GEL  AL LF+ MP RN+MSCNILI  +I  GEL  A +LFD+M  RN+A+WNA+V
Sbjct: 2   YSKIGELQTALLLFNSMPMRNIMSCNILINAYIHSGELDSARNLFDEMPERNVATWNAVV 61

Query: 472 TGCIQFGFNEEGLDYFLEMHKVGFLPDVFTVGSVLRGCAGSKELNKGRQVHGYVVKSGLG 293
            G IQF  NEEGL+ F +M+++GFLPD +T+GSVLRGCAG K +  GRQVH YVVK G  
Sbjct: 62  AGLIQFEINEEGLNLFRDMYELGFLPDEYTLGSVLRGCAGLKSMYAGRQVHCYVVKCGFE 121

Query: 292 YSLVVCGSLAHMYMKGGSLGEGEKIIKSMPVRSVAICNTLIAGKAQNGYAEGALEQYNMM 113
           ++LVV  SLAHMYMK GSL EGE++IKSMP R++   NTLIAGK+QNG++E  L+ YNMM
Sbjct: 122 FNLVVGSSLAHMYMKSGSLSEGERVIKSMPSRNIVAWNTLIAGKSQNGHSEEVLDLYNMM 181

Query: 112 KMAGFRPDEITFVSVLSSCSELATLGQGQQIHAEMTK 2
           ++ GFRPD+ITF SV+SSCSEL TLGQGQQIHAE+ K
Sbjct: 182 RIMGFRPDKITFASVISSCSELTTLGQGQQIHAEVIK 218



 Score =  105 bits (262), Expect = 1e-20
 Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 5/192 (2%)
 Frame = -3

Query: 577 NILIGG-----FIQIGELGHAIDLFDQMTRRNLASWNAMVTGCIQFGFNEEGLDYFLEMH 413
           N+++G      +++ G L     +   M  RN+ +WN ++ G  Q G +EE LD +  M 
Sbjct: 123 NLVVGSSLAHMYMKSGSLSEGERVIKSMPSRNIVAWNTLIAGKSQNGHSEEVLDLYNMMR 182

Query: 412 KVGFLPDVFTVGSVLRGCAGSKELNKGRQVHGYVVKSGLGYSLVVCGSLAHMYMKGGSLG 233
            +GF PD  T  SV+  C+    L +G+Q+H  V+K+G    + V  SL  MY + G L 
Sbjct: 183 IMGFRPDKITFASVISSCSELTTLGQGQQIHAEVIKAGASSVVAVTSSLISMYSRCGCLE 242

Query: 232 EGEKIIKSMPVRSVAICNTLIAGKAQNGYAEGALEQYNMMKMAGFRPDEITFVSVLSSCS 53
           +  K+        V + +++IA    +G  E A++ ++ M+      +++TF+S+L +CS
Sbjct: 243 DSVKVFLECKDVDVILWSSMIAAYGFHGRGEEAIKLFHQMEQENLEANDVTFLSLLYACS 302

Query: 52  ELATLGQGQQIH 17
                 +G +IH
Sbjct: 303 HCGLKDKGVEIH 314