BLASTX nr result

ID: Lithospermum22_contig00018227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018227
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   216   8e-54
ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...   215   1e-53
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|1...   214   4e-53
ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   210   4e-52
ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   209   1e-51

>ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
            sativus] gi|449439503|ref|XP_004137525.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
            sativus] gi|449439505|ref|XP_004137526.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
            sativus] gi|449503086|ref|XP_004161827.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
            sativus] gi|449503089|ref|XP_004161828.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
            sativus] gi|449503091|ref|XP_004161829.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
            sativus]
          Length = 378

 Score =  216 bits (550), Expect = 8e-54
 Identities = 99/112 (88%), Positives = 106/112 (94%), Gaps = 2/112 (1%)
 Frame = -2

Query: 1056 PSNF--GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDGLPDIKITEDLLASDSYQC 883
            PSNF  GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI+GLPDIKITE+LLA+DS QC
Sbjct: 165  PSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQC 224

Query: 882  AVCKDSFELSEVAKQIPCKHIYHKDCILPWLELHNSCPVCRFELPTDDPDYE 727
            AVCKD+FEL EVAK +PCKHIYH DCI+PWLELHNSCPVCR+ELPTDDPDYE
Sbjct: 225  AVCKDTFELDEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYE 276


>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  215 bits (548), Expect = 1e-53
 Identities = 96/111 (86%), Positives = 103/111 (92%)
 Frame = -2

Query: 1059 LPSNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDGLPDIKITEDLLASDSYQCA 880
            LP+N GDYF GPGLEQLIQQLAENDPNRYGTPPASKSA++ LPDIK+T++LL SDS QCA
Sbjct: 143  LPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAVENLPDIKVTKELLESDSSQCA 202

Query: 879  VCKDSFELSEVAKQIPCKHIYHKDCILPWLELHNSCPVCRFELPTDDPDYE 727
            VCKDSFEL E AKQIPCKHIYHKDCI PWLELHNSCPVCR+ELPTDDPDYE
Sbjct: 203  VCKDSFELGEEAKQIPCKHIYHKDCITPWLELHNSCPVCRYELPTDDPDYE 253


>ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|118486397|gb|ABK95038.1|
            unknown [Populus trichocarpa] gi|222870634|gb|EEF07765.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  214 bits (544), Expect = 4e-53
 Identities = 93/111 (83%), Positives = 104/111 (93%)
 Frame = -2

Query: 1059 LPSNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDGLPDIKITEDLLASDSYQCA 880
            +P+N GDYF GPGLEQLIQQLAENDPNRYGTPPA+KSA++ LPD+K+TE+L+ SDS QCA
Sbjct: 142  VPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPAAKSAVENLPDVKVTEELMQSDSSQCA 201

Query: 879  VCKDSFELSEVAKQIPCKHIYHKDCILPWLELHNSCPVCRFELPTDDPDYE 727
            VCKDSFEL EVAKQIPCKHIYHKDCI+PWLELHNSCPVCR+ELPTDD DYE
Sbjct: 202  VCKDSFELGEVAKQIPCKHIYHKDCIMPWLELHNSCPVCRYELPTDDQDYE 252


>ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Glycine
            max] gi|356531054|ref|XP_003534093.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 2 [Glycine
            max]
          Length = 376

 Score =  210 bits (535), Expect = 4e-52
 Identities = 92/106 (86%), Positives = 100/106 (94%)
 Frame = -2

Query: 1044 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDGLPDIKITEDLLASDSYQCAVCKDS 865
            GDYFFGPGLE+LIQ LAENDPNRYGTPPASKSA++GLPD+ +TE+LLASDS QCAVCKD+
Sbjct: 151  GDYFFGPGLEELIQHLAENDPNRYGTPPASKSAVEGLPDVSVTEELLASDSSQCAVCKDT 210

Query: 864  FELSEVAKQIPCKHIYHKDCILPWLELHNSCPVCRFELPTDDPDYE 727
            FEL E AKQIPCKHIYH DCILPWLELHNSCPVCR+ELPTDDPDYE
Sbjct: 211  FELGETAKQIPCKHIYHADCILPWLELHNSCPVCRYELPTDDPDYE 256


>ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 369

 Score =  209 bits (531), Expect = 1e-51
 Identities = 91/106 (85%), Positives = 99/106 (93%)
 Frame = -2

Query: 1044 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDGLPDIKITEDLLASDSYQCAVCKDS 865
            GDYFFGPGLE+LIQ LAENDPNRYGTPPASKS ++GLPD+ +TE+LLASDS QCAVCKD+
Sbjct: 150  GDYFFGPGLEELIQHLAENDPNRYGTPPASKSVVEGLPDVSVTEELLASDSSQCAVCKDT 209

Query: 864  FELSEVAKQIPCKHIYHKDCILPWLELHNSCPVCRFELPTDDPDYE 727
            FEL E AKQIPCKHIYH DCILPWLELHNSCPVCR+ELPTDDPDYE
Sbjct: 210  FELGETAKQIPCKHIYHADCILPWLELHNSCPVCRYELPTDDPDYE 255


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