BLASTX nr result

ID: Lithospermum22_contig00018217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018217
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516614.1| ring finger protein, putative [Ricinus commu...    76   3e-12
ref|XP_002324833.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...    71   8e-11
emb|CBI20932.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...    71   1e-10

>ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
           gi|223544434|gb|EEF45955.1| ring finger protein,
           putative [Ricinus communis]
          Length = 437

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +1

Query: 1   CSHFFHKECVDKWLKINATCPLCKAEVGETLMNTLTEVSASLRQ 132
           CSHFFHK+CVDKWLKINA+CPLCK EVGE++M +LT  +   RQ
Sbjct: 380 CSHFFHKDCVDKWLKINASCPLCKTEVGESVMGSLTATNTGQRQ 423


>ref|XP_002324833.1| predicted protein [Populus trichocarpa] gi|222866267|gb|EEF03398.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 29/44 (65%), Positives = 40/44 (90%)
 Frame = +1

Query: 1   CSHFFHKECVDKWLKINATCPLCKAEVGETLMNTLTEVSASLRQ 132
           CSHFFHK+CVDKWLKINA+CPLCK+EVGE+++ +L  +++S R+
Sbjct: 377 CSHFFHKDCVDKWLKINASCPLCKSEVGESILGSLPGLNSSQRR 420


>ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
           vinifera]
          Length = 421

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = +1

Query: 1   CSHFFHKECVDKWLKINATCPLCKAEVGETLMNTLTEVS 117
           CSHFFHKECVDKWLKINA CPLCK EVGE+ + +L+ +S
Sbjct: 381 CSHFFHKECVDKWLKINALCPLCKREVGESFLGSLSGLS 419


>emb|CBI20932.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = +1

Query: 1   CSHFFHKECVDKWLKINATCPLCKAEVGETLMNTLTEVS 117
           CSHFFHKECVDKWLKINA CPLCK EVGE+ + +L+ +S
Sbjct: 361 CSHFFHKECVDKWLKINALCPLCKREVGESFLGSLSGLS 399


>ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
           sativus] gi|449499624|ref|XP_004160867.1| PREDICTED: E3
           ubiquitin-protein ligase At4g11680-like [Cucumis
           sativus]
          Length = 424

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +1

Query: 1   CSHFFHKECVDKWLKINATCPLCKAEVGETLMNTL 105
           CSHFFHK+CVDKWLKINA CPLCKAEVGE+++ +L
Sbjct: 381 CSHFFHKDCVDKWLKINALCPLCKAEVGESIVGSL 415


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