BLASTX nr result
ID: Lithospermum22_contig00018191
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00018191
(804 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15896.3| unnamed protein product [Vitis vinifera] 232 6e-59
ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containi... 232 6e-59
ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containi... 221 1e-55
ref|XP_002533891.1| pentatricopeptide repeat-containing protein,... 219 4e-55
ref|NP_187518.1| pentatricopeptide repeat-containing protein [Ar... 219 6e-55
>emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 232 bits (592), Expect = 6e-59
Identities = 110/212 (51%), Positives = 157/212 (74%), Gaps = 2/212 (0%)
Frame = +3
Query: 174 AAISLFNSANHH--LPPDPSIIHHLLRRLSLSPNPNHIVHVSKIVELIQTQNQKCPFDEN 347
+A+S+F+S P + HH+L+RL +P + HVS+IVELI+TQ KCP E+
Sbjct: 25 SALSIFDSVTRFPGYSHTPYVFHHILKRLF---DPKLVAHVSRIVELIRTQKCKCP--ED 79
Query: 348 IALLVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRAELFFRY 527
+AL VIKA+++N M D+AL FQ + FG +P ++ YN+LLNA + N+ AE FF Y
Sbjct: 80 VALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLY 139
Query: 528 FKAMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNGE 707
F+ MG+ PNL+TYN+LIK++C+K++F + +ELL +MWE+G PDVFSYGTLIN L+KNG
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199
Query: 708 MARAMEVFEEMFERGVSPDVMCFNILIDGFYR 803
M+ A+++F+EM ERGV+PDV C+NILIDGF++
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFK 231
Score = 93.2 bits (230), Expect = 6e-17
Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 1/149 (0%)
Frame = +3
Query: 360 VIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVV-GNQLSRAELFFRYFKA 536
+I + ++N + AL F + G P V CYN L++ F G+ L+ +E++ R K
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLKG 248
Query: 537 MGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNGEMAR 716
+ PN+ +YNV+I CK +F E+ M + D+++Y TLI+GL +G +
Sbjct: 249 PSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDG 308
Query: 717 AMEVFEEMFERGVSPDVMCFNILIDGFYR 803
A V++EM E GVSPDV+ +N +++G+ R
Sbjct: 309 ATRVYKEMAENGVSPDVVVYNTMLNGYLR 337
Score = 88.6 bits (218), Expect = 1e-15
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
Frame = +3
Query: 306 LIQTQNQKCPFDENIALLVIKAFSRNCMVDKALSFFQNI--KGFFGFEPSVKCYNTLLNA 479
L Q C + ++ VI F R ++ AL FF N+ KG F P+V YNTL+N
Sbjct: 452 LDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF---PTVVTYNTLING 508
Query: 480 FVVGNQLSRAELFFRYFKAMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPD 659
+ S A + G +PN+ TY++L+ C+ ++ L EKG KPD
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPD 568
Query: 660 VFSYGTLINGLSKNGEMARAMEVFEEMFERGVSPDVMCFNILIDGFYR 803
V + +I+GL +G++ A++++ EM +R P+++ N L++GFY+
Sbjct: 569 VKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYK 616
Score = 58.9 bits (141), Expect = 1e-06
Identities = 38/155 (24%), Positives = 69/155 (44%)
Frame = +3
Query: 330 CPFDENIALLVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRA 509
C D +++ +N ++KALS + + G + Y++++N +L
Sbjct: 390 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG-DLDTFAYSSMINGLCREGRLDEV 448
Query: 510 ELFFRYFKAMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLING 689
G +PN N +I + + G M KG P V +Y TLING
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508
Query: 690 LSKNGEMARAMEVFEEMFERGVSPDVMCFNILIDG 794
LSK + A + +EM +G P+++ +++L++G
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG 543
>ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 232 bits (592), Expect = 6e-59
Identities = 110/212 (51%), Positives = 157/212 (74%), Gaps = 2/212 (0%)
Frame = +3
Query: 174 AAISLFNSANHH--LPPDPSIIHHLLRRLSLSPNPNHIVHVSKIVELIQTQNQKCPFDEN 347
+A+S+F+S P + HH+L+RL +P + HVS+IVELI+TQ KCP E+
Sbjct: 25 SALSIFDSVTRFPGYSHTPYVFHHILKRLF---DPKLVAHVSRIVELIRTQKCKCP--ED 79
Query: 348 IALLVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRAELFFRY 527
+AL VIKA+++N M D+AL FQ + FG +P ++ YN+LLNA + N+ AE FF Y
Sbjct: 80 VALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLY 139
Query: 528 FKAMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNGE 707
F+ MG+ PNL+TYN+LIK++C+K++F + +ELL +MWE+G PDVFSYGTLIN L+KNG
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199
Query: 708 MARAMEVFEEMFERGVSPDVMCFNILIDGFYR 803
M+ A+++F+EM ERGV+PDV C+NILIDGF++
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFK 231
Score = 93.2 bits (230), Expect = 6e-17
Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 1/149 (0%)
Frame = +3
Query: 360 VIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVV-GNQLSRAELFFRYFKA 536
+I + ++N + AL F + G P V CYN L++ F G+ L+ +E++ R K
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLKG 248
Query: 537 MGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNGEMAR 716
+ PN+ +YNV+I CK +F E+ M + D+++Y TLI+GL +G +
Sbjct: 249 PSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDG 308
Query: 717 AMEVFEEMFERGVSPDVMCFNILIDGFYR 803
A V++EM E GVSPDV+ +N +++G+ R
Sbjct: 309 ATRVYKEMAENGVSPDVVVYNTMLNGYLR 337
Score = 88.6 bits (218), Expect = 1e-15
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
Frame = +3
Query: 306 LIQTQNQKCPFDENIALLVIKAFSRNCMVDKALSFFQNI--KGFFGFEPSVKCYNTLLNA 479
L Q C + ++ VI F R ++ AL FF N+ KG F P+V YNTL+N
Sbjct: 452 LDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF---PTVVTYNTLING 508
Query: 480 FVVGNQLSRAELFFRYFKAMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPD 659
+ S A + G +PN+ TY++L+ C+ ++ L EKG KPD
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPD 568
Query: 660 VFSYGTLINGLSKNGEMARAMEVFEEMFERGVSPDVMCFNILIDGFYR 803
V + +I+GL +G++ A++++ EM +R P+++ N L++GFY+
Sbjct: 569 VKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYK 616
Score = 63.5 bits (153), Expect = 5e-08
Identities = 33/118 (27%), Positives = 60/118 (50%)
Frame = +3
Query: 435 GFEPSVKCYNTLLNAFVVGNQLSRAELFFRYFKAMGIEPNLETYNVLIKVACKKREFGRG 614
GF+P VK +N +++ ++ A + K PNL T+N L++ K R+F R
Sbjct: 564 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERA 623
Query: 615 RELLGFMWEKGLKPDVFSYGTLINGLSKNGEMARAMEVFEEMFERGVSPDVMCFNILI 788
++ + + G +PD+ SY + GL ++ A+ + +RGV P + +NIL+
Sbjct: 624 SKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681
Score = 58.9 bits (141), Expect = 1e-06
Identities = 38/155 (24%), Positives = 69/155 (44%)
Frame = +3
Query: 330 CPFDENIALLVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRA 509
C D +++ +N ++KALS + + G + Y++++N +L
Sbjct: 390 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG-DLDTFAYSSMINGLCREGRLDEV 448
Query: 510 ELFFRYFKAMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLING 689
G +PN N +I + + G M KG P V +Y TLING
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508
Query: 690 LSKNGEMARAMEVFEEMFERGVSPDVMCFNILIDG 794
LSK + A + +EM +G P+++ +++L++G
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG 543
>ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 221 bits (563), Expect = 1e-55
Identities = 107/213 (50%), Positives = 155/213 (72%), Gaps = 2/213 (0%)
Frame = +3
Query: 171 DAAISLFNSANHH--LPPDPSIIHHLLRRLSLSPNPNHIVHVSKIVELIQTQNQKCPFDE 344
+AA+++F+SA H P + HH+LRRL +P +VHV +IV+L++ Q +C E
Sbjct: 24 NAALAIFDSACQHPGYAHPPFVFHHILRRLM---DPKLVVHVGRIVDLMRAQ--RCTCSE 78
Query: 345 NIALLVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRAELFFR 524
++AL IKA+++ M D+AL+ FQN+ FG P ++ +N++LNAF+ NQ AELFF
Sbjct: 79 DVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFT 138
Query: 525 YFKAMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNG 704
YF+ G+ PNL+TYN+LIK++CKKR+F +G+ LL +M+E GL PD+ SYGTLIN L+K+G
Sbjct: 139 YFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSG 198
Query: 705 EMARAMEVFEEMFERGVSPDVMCFNILIDGFYR 803
+ A+E+F+EM RGV+PDVMC+NILIDGF R
Sbjct: 199 NLLDAVELFDEMSVRGVNPDVMCYNILIDGFLR 231
Score = 91.3 bits (225), Expect = 2e-16
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +3
Query: 435 GFEPSVKCYNTLLNAFV-VGNQLSRAELFFRYFKAMGIEPNLETYNVLIKVACKKREFGR 611
G P V CYN L++ F+ G+ + E++ R + P++ETYN++I CK +
Sbjct: 214 GVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDE 273
Query: 612 GRELLGFMWEKGLKPDVFSYGTLINGLSKNGEMARAMEVFEEMFERGVSPDVMCFNILID 791
E+ M + PD+F++ ++I+GLSK G A +VF+EM E G+SPDV +N ++
Sbjct: 274 SMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLS 333
Query: 792 GFYR 803
G +R
Sbjct: 334 GLFR 337
Score = 69.7 bits (169), Expect = 7e-10
Identities = 44/173 (25%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Frame = +3
Query: 288 VSKIVELI-QTQNQKCPFDENIALLVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYN 464
+ + VELI Q + + + ++ +I + R +++A+S + +K P+V YN
Sbjct: 445 LEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSK-DCAPTVVSYN 503
Query: 465 TLLNAFVVGNQLSRAELFFRYFKAMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEK 644
T++N + S A L + G++P++ TY++LI C+ + L K
Sbjct: 504 TIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINK 563
Query: 645 GLKPDVFSYGTLINGLSKNGEMARAMEVFEEMFERGVSPDVMCFNILIDGFYR 803
LKPD+ + +I+GL ++ A+E+F +M + PD++ N +++G Y+
Sbjct: 564 RLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYK 616
Score = 61.2 bits (147), Expect = 3e-07
Identities = 28/120 (23%), Positives = 63/120 (52%)
Frame = +3
Query: 435 GFEPSVKCYNTLLNAFVVGNQLSRAELFFRYFKAMGIEPNLETYNVLIKVACKKREFGRG 614
G +P + Y+ L++ G ++ A + ++P+L+ +N++I C ++
Sbjct: 529 GLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVA 588
Query: 615 RELLGFMWEKGLKPDVFSYGTLINGLSKNGEMARAMEVFEEMFERGVSPDVMCFNILIDG 794
E+ M + PD+ ++ T++ GL K G+ A+++++ + E G+ PD++ +NI G
Sbjct: 589 LEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKG 648
Score = 58.5 bits (140), Expect = 2e-06
Identities = 40/149 (26%), Positives = 67/149 (44%)
Frame = +3
Query: 357 LVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRAELFFRYFKA 536
L+I +N ++KAL + + G + Y+++++ L +A K
Sbjct: 399 LLINGLCKNGYLNKALRILEEAENE-GADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKK 457
Query: 537 MGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNGEMAR 716
+ N +N LI + + +L M K P V SY T+INGL K +
Sbjct: 458 NRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSD 517
Query: 717 AMEVFEEMFERGVSPDVMCFNILIDGFYR 803
A +EM E G+ PD++ +++LIDG R
Sbjct: 518 AYLSLKEMLEEGLKPDMITYSLLIDGLCR 546
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/119 (24%), Positives = 60/119 (50%)
Frame = +3
Query: 447 SVKCYNTLLNAFVVGNQLSRAELFFRYFKAMGIEPNLETYNVLIKVACKKREFGRGRELL 626
++ YN L+ + ++ +A +++ G++ + TY +LI CK + +L
Sbjct: 358 NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRIL 417
Query: 627 GFMWEKGLKPDVFSYGTLINGLSKNGEMARAMEVFEEMFERGVSPDVMCFNILIDGFYR 803
+G D F+Y ++++GL K G + +A+E+ +M + + FN LI+G+ R
Sbjct: 418 EEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVR 476
>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 701
Score = 219 bits (559), Expect = 4e-55
Identities = 107/210 (50%), Positives = 154/210 (73%)
Frame = +3
Query: 174 AAISLFNSANHHLPPDPSIIHHLLRRLSLSPNPNHIVHVSKIVELIQTQNQKCPFDENIA 353
+A+SLF SA+ + + HH+LRRL+ + + HVS+IV++++ Q KCP E++A
Sbjct: 28 SALSLFESASRNKSHSAHVFHHILRRLAA--DSRLVSHVSRIVDIVKAQ--KCPCKEDVA 83
Query: 354 LLVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRAELFFRYFK 533
L VIKA+++N M +KAL FQN++ FG +P V+ YNTLLNAFV N+ RAE F RYF+
Sbjct: 84 LTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFE 143
Query: 534 AMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNGEMA 713
+M + PNL+TYN+LIK++CKK++ + LL +MW + LKPDVFSYGTLING+ K G++
Sbjct: 144 SMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLL 203
Query: 714 RAMEVFEEMFERGVSPDVMCFNILIDGFYR 803
A++VF+EM RGV DV C+N+LIDGF++
Sbjct: 204 GALKVFDEMSVRGVVADVTCYNMLIDGFFK 233
Score = 77.8 bits (190), Expect = 3e-12
Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Frame = +3
Query: 390 VDKALSFFQNI-KGFFGFEPSVKCYNTLLNAFVVGNQLSRAELFFRYFKAMGIEPNLETY 566
+D+A+S + K + +P V N L+N FV ++L A FFR + G P + +Y
Sbjct: 447 MDEAISIVNQMDKRGYKLDPHV--CNPLINGFVRASKLEDAINFFREMECKGCSPTIVSY 504
Query: 567 NVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNGEMARAMEVFEEMFE 746
N LIK CK F + M EK KPD+ + L++GL + ++ A+ ++++ +
Sbjct: 505 NTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALD 564
Query: 747 RGVSPDVMCFNILIDG 794
+G PD+ +NIL+ G
Sbjct: 565 KGFKPDITMYNILMHG 580
Score = 70.9 bits (172), Expect = 3e-10
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Frame = +3
Query: 435 GFEPSVKCYNTLLNAFVVGNQLSRA-ELFFRYFKAMGIEPNLETYNVLIKVACKKREFGR 611
G V CYN L++ F + E++ R K + PN+ TYN++I CK F
Sbjct: 216 GVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDE 275
Query: 612 GRELLGFMWEKGLKPDVFSYGTLINGLSKNGEMARAMEVFEEMFERGVSPDVMCFNILID 791
E+ M + + D+F+Y +LI+GL + G + A+ V++E+ E + D + N +++
Sbjct: 276 SLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLN 335
Query: 792 GFYR 803
GF R
Sbjct: 336 GFCR 339
Score = 67.4 bits (163), Expect = 3e-09
Identities = 39/144 (27%), Positives = 70/144 (48%)
Frame = +3
Query: 357 LVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRAELFFRYFKA 536
L++ + ++ AL+ +Q GF+P + YN L++ +L A + + K
Sbjct: 541 LLMDGLCQEKKIEMALNLWQQALDK-GFKPDITMYNILMHGLCSVCKLEDALQLYSHMKR 599
Query: 537 MGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNGEMAR 716
PNL T N L++ K R++ + E+ + + GL PD+ SY I GL ++
Sbjct: 600 STCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISD 659
Query: 717 AMEVFEEMFERGVSPDVMCFNILI 788
A+E + RG+ P + +NIL+
Sbjct: 660 AIEFLNDALNRGILPTAVTWNILV 683
Score = 65.1 bits (157), Expect = 2e-08
Identities = 37/155 (23%), Positives = 78/155 (50%)
Frame = +3
Query: 339 DENIALLVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRAELF 518
D ++ +I F R ++ A++FF+ ++ G P++ YNTL+ + S A F
Sbjct: 465 DPHVCNPLINGFVRASKLEDAINFFREME-CKGCSPTIVSYNTLIKGLCKAERFSEAYSF 523
Query: 519 FRYFKAMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSK 698
+ +P++ T ++L+ C++++ L +KG KPD+ Y L++GL
Sbjct: 524 VKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCS 583
Query: 699 NGEMARAMEVFEEMFERGVSPDVMCFNILIDGFYR 803
++ A++++ M P+++ N L++G Y+
Sbjct: 584 VCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYK 618
Score = 63.9 bits (154), Expect = 4e-08
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Frame = +3
Query: 357 LVIKAFSRNCMVDKALSFF-----QNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRAELFF 521
++IK + ++KA+S QN+K P V Y TL+N V L A F
Sbjct: 156 ILIKISCKKQQIEKAISLLDWMWSQNLK------PDVFSYGTLINGMVKVGDLLGALKVF 209
Query: 522 RYFKAMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLK-----PDVFSYGTLIN 686
G+ ++ YN+LI K ++ +G+E+ WE+ +K P+V +Y +IN
Sbjct: 210 DEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEI----WERLVKDCSVYPNVVTYNIMIN 265
Query: 687 GLSKNGEMARAMEVFEEMFERGVSPDVMCFNILIDG 794
GL K G ++E++E M + D+ ++ LI G
Sbjct: 266 GLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHG 301
Score = 57.0 bits (136), Expect = 5e-06
Identities = 33/119 (27%), Positives = 53/119 (44%)
Frame = +3
Query: 447 SVKCYNTLLNAFVVGNQLSRAELFFRYFKAMGIEPNLETYNVLIKVACKKREFGRGRELL 626
+V YN L+ ++ A + G P TY VLI CK + ++
Sbjct: 360 TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIF 419
Query: 627 GFMWEKGLKPDVFSYGTLINGLSKNGEMARAMEVFEEMFERGVSPDVMCFNILIDGFYR 803
+ K D ++Y ++++GL K G M A+ + +M +RG D N LI+GF R
Sbjct: 420 KEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVR 478
>ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g09060 gi|5923671|gb|AAD56322.1|AC009326_9
hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 219 bits (558), Expect = 6e-55
Identities = 111/212 (52%), Positives = 151/212 (71%), Gaps = 2/212 (0%)
Frame = +3
Query: 174 AAISLFNSANHH--LPPDPSIIHHLLRRLSLSPNPNHIVHVSKIVELIQTQNQKCPFDEN 347
AA +LF+SA H + HH+LRRLS + NH VS+IVELI++Q KC DE+
Sbjct: 25 AAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNH---VSRIVELIRSQECKC--DED 79
Query: 348 IALLVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRAELFFRY 527
+AL VIK + +N M D+AL F+ ++ FG EP+++ YNTLLNAFV Q + E F Y
Sbjct: 80 VALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAY 139
Query: 528 FKAMGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNGE 707
F+ G+ PNL+TYNVLIK++CKK+EF + R L +MW++G KPDVFSY T+IN L+K G+
Sbjct: 140 FETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGK 199
Query: 708 MARAMEVFEEMFERGVSPDVMCFNILIDGFYR 803
+ A+E+F+EM ERGV+PDV C+NILIDGF +
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Score = 73.2 bits (178), Expect = 6e-11
Identities = 39/120 (32%), Positives = 62/120 (51%)
Frame = +3
Query: 435 GFEPSVKCYNTLLNAFVVGNQLSRAELFFRYFKAMGIEPNLETYNVLIKVACKKREFGRG 614
G E + N L+ + ++L A F R G P + +YN+LI CK +FG
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 615 RELLGFMWEKGLKPDVFSYGTLINGLSKNGEMARAMEVFEEMFERGVSPDVMCFNILIDG 794
+ M E G KPD+ +Y L+ GL ++ ++ A+E++ + + G+ DVM NILI G
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Score = 72.8 bits (177), Expect = 8e-11
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Frame = +3
Query: 225 SIIHHLLRRLSLSPNPNHIVHVSKI-VELIQTQNQKCPFDENIALLVIKAFSRNCMVDKA 401
SII L ++ L N + +SK VEL + ++ +I R+ + +A
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVEL----------NSHVCNALIGGLIRDSRLGEA 483
Query: 402 LSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRAELFFRYFKAMGIEPNLETYNVLIK 581
SFF G G P+V YN L+ + A F + G +P+L+TY++L+
Sbjct: 484 -SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542
Query: 582 VACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNGEMARAMEVFEEMFERGVSP 761
C+ R+ EL + GL+ DV + LI+GL G++ AM V M R +
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602
Query: 762 DVMCFNILIDGFYR 803
+++ +N L++GF++
Sbjct: 603 NLVTYNTLMEGFFK 616
Score = 65.9 bits (159), Expect = 1e-08
Identities = 40/144 (27%), Positives = 69/144 (47%)
Frame = +3
Query: 357 LVIKAFSRNCMVDKALSFFQNIKGFFGFEPSVKCYNTLLNAFVVGNQLSRAELFFRYFKA 536
+++ R+ +D AL + G E V +N L++ +L A +
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQS-GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 537 MGIEPNLETYNVLIKVACKKREFGRGRELLGFMWEKGLKPDVFSYGTLINGLSKNGEMAR 716
NL TYN L++ K + R + G+M++ GL+PD+ SY T++ GL ++
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 717 AMEVFEEMFERGVSPDVMCFNILI 788
AME F++ G+ P V +NIL+
Sbjct: 658 AMEFFDDARNHGIFPTVYTWNILV 681