BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018145
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   2e-08
gb|ABI34321.1| RNase H family protein [Solanum demissum]               63   2e-08
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               61   9e-08
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    61   9e-08
gb|EEE50811.1| hypothetical protein OsJ_31200 [Oryza sativa Japo...    59   4e-07

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
 Frame = +1

Query: 16   MQKAWKRLREGNSLWSIFMLNKYCRKYHPRIAPVHPSHSRVWKNLHEVRDEAESNIHWQL 195
            M+  WK +   +++W   +  KY ++ +  +  +  + S  WKNL   R+     + W +
Sbjct: 883  MKLLWKIMVSKDNIWVKLVTQKYLKEQNLLVCKIPSNASWQWKNLLRHRNFFSKGLRWLI 942

Query: 196  GQGL-CDFWMDSWMELGPLCHLYPDQRG--RIRVNQVWLD-GTWDEAALSKLISPDHLHR 363
            G G    FW D+W+   PL   Y    G   I+V + +   G WD   L  L+ P+ +  
Sbjct: 943  GDGQDISFWTDNWIFQYPLNSKYVPTVGSENIKVAECFNGLGGWDIPKLLTLVPPNIVKA 1002

Query: 364  VKEVFIDQGT-PDLLLWKSSKDGHFSFKATYEEVRD 468
            +  VFI   +  D LLW  +  G +S K+    +R+
Sbjct: 1003 ISSVFIPSSSQQDRLLWGLTPTGQYSVKSGASLIRE 1038


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
 Frame = +1

Query: 88  RKYHPRIAPVHPSHSRVWKNLHEVRDEAESNIHWQLGQGLCDFWMDSWMELGPLCHLY-- 261
           ++ HP         S  W  + ++R   E+NI W +  G    W D+WM  G L ++   
Sbjct: 430 KRVHPVAKAKSSKQSHTWSKMLKIRHSVENNILWIIYAGNVSMWWDNWMGNGALSNILPP 489

Query: 262 PDQRGRIRVNQVWLDGTWDEAALSKLISPDHLHRVKEVFI-DQGTPDLLLWKSSKDGHFS 438
           P    +  V        WD   LS ++ P  ++++  + I D    D  +W  S++GHF+
Sbjct: 490 PSHYNKDNVKDFIHKREWDFDKLSDILPPQVVNQIVSIPIGDPNQSDYAIWIPSENGHFT 549

Query: 439 FKATYEEVRDQRQ 477
            K+ Y +  + R+
Sbjct: 550 TKSAYVDCSNTRE 562


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
 Frame = +1

Query: 28  WKRLREGNSLWSIFMLNKYC--RKYHPRIAPVHPSHSRVWKNLH-EVRDEAESNIHWQLG 198
           W+ L+E NSLW++ +  KY        R      S S  W+++   +RD     + W  G
Sbjct: 228 WRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPG 287

Query: 199 QGL-CDFWMDSWMELGPLCHLYPDQR----GRIRVNQVWLDGT-WDEAALSKLISPDHLH 360
            G    FW D W+   PL  L   +R      +    +W+ G  WD A +    + +   
Sbjct: 288 DGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNTRL 347

Query: 361 RVKEVFID--QGTPDLLLWKSSKDGHFSFKATYE 456
            ++ V +D   G  D L WK S+DG FS ++ YE
Sbjct: 348 ELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYE 381


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
 Frame = +1

Query: 28  WKRLREGNSLWSIFMLNKYC--RKYHPRIAPVHPSHSRVWKNLH-EVRDEAESNIHWQLG 198
           W+ L+E NSLW++ +  KY        R      S S  W+++   +RD     + W  G
Sbjct: 119 WRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPG 178

Query: 199 QGL-CDFWMDSWMELGPLCHLYPDQR----GRIRVNQVWLDGT-WDEAALSKLISPDHLH 360
            G    FW D W+   PL  L   +R      +    +W+ G  WD A +    + +   
Sbjct: 179 DGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNTRL 238

Query: 361 RVKEVFID--QGTPDLLLWKSSKDGHFSFKATYE 456
            ++ V +D   G  D L WK S+DG FS ++ YE
Sbjct: 239 ELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYE 272


>gb|EEE50811.1| hypothetical protein OsJ_31200 [Oryza sativa Japonica Group]
          Length = 881

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
 Frame = +1

Query: 16  MQKAWKRLREGNSLWSIFMLNKYCRKYHPRIAPVHPSHSRVWKNLHEVRDEAESNIHWQL 195
           +Q AW+ L   N L S  + +KY        A      S  W ++ +VRD  E    WQL
Sbjct: 479 VQSAWRILTNPNDLLSSVLKSKYFPNTSFWKARTDMPKSAFWSSILQVRDVLEEASVWQL 538

Query: 196 GQGLCDFWMDSWMELGPLCHLY----------PDQRGRIRVNQVWLDG-TWDEAALSKLI 342
            +G    W   W  +    H +          PD     +V+ +W +   WD   ++++ 
Sbjct: 539 SKGDISIWSQPWCSIWKNIHDHLNLDNLPFHMPD-----KVSDLWDENKNWDAQKITQIF 593

Query: 343 SPDHLHRVKEVFIDQG-TPDLLLWKSSKDGHFSFKATYEEVRDQRQPS 483
                H + +V I QG   D L WK +  G  S K+ Y+ + ++  P+
Sbjct: 594 DSAAQHSIMQVQIMQGEEEDRLCWKYTPSGVCSAKSAYKTIYNEMYPN 641