BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018104
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34953.3| unnamed protein product [Vitis vinifera]              282   4e-74
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...   282   4e-74
ref|XP_002875418.1| predicted protein [Arabidopsis lyrata subsp....   258   7e-67
ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...   257   1e-66
ref|NP_566830.1| DNA repair protein UVH3 [Arabidopsis thaliana] ...   256   2e-66

>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score =  282 bits (721), Expect = 4e-74
 Identities = 152/217 (70%), Positives = 171/217 (78%), Gaps = 1/217 (0%)
 Frame = +2

Query: 2   MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 181
           MGVH LWELLAPVGRRVSVETLAGK+LAIDASIWMIQFMKAMRDEKGEM+RN HL+GFFR
Sbjct: 1   MGVHGLWELLAPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDEKGEMVRNGHLLGFFR 60

Query: 182 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 361
           RICKLLFLR KPVFVFDG TPALKRRTV+ARRRQRENAQ KIRKTAEKLLLN LKAMRLK
Sbjct: 61  RICKLLFLRTKPVFVFDGGTPALKRRTVVARRRQRENAQAKIRKTAEKLLLNHLKAMRLK 120

Query: 362 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRVVD-ETIMANHLSEDENISAATCSREAL 538
           EL K+L+ QR             +  N KGK+V+  +T  A  +SE  +  + T ++E L
Sbjct: 121 ELAKDLENQR-------------LNNNDKGKKVLSYQTETAGEVSEGNSSVSGTYNQEKL 167

Query: 539 DEMLAASIAAEEDGSFSPDASTSGAGVHYEEDEDDDE 649
           DEMLAAS+AAEEDG+F  D     AG+  EED+DDDE
Sbjct: 168 DEMLAASLAAEEDGNFVGD-----AGISNEEDDDDDE 199


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score =  282 bits (721), Expect = 4e-74
 Identities = 152/217 (70%), Positives = 171/217 (78%), Gaps = 1/217 (0%)
 Frame = +2

Query: 2   MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 181
           MGVH LWELLAPVGRRVSVETLAGK+LAIDASIWMIQFMKAMRDEKGEM+RN HL+GFFR
Sbjct: 1   MGVHGLWELLAPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDEKGEMVRNGHLLGFFR 60

Query: 182 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 361
           RICKLLFLR KPVFVFDG TPALKRRTV+ARRRQRENAQ KIRKTAEKLLLN LKAMRLK
Sbjct: 61  RICKLLFLRTKPVFVFDGGTPALKRRTVVARRRQRENAQAKIRKTAEKLLLNHLKAMRLK 120

Query: 362 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRVVD-ETIMANHLSEDENISAATCSREAL 538
           EL K+L+ QR             +  N KGK+V+  +T  A  +SE  +  + T ++E L
Sbjct: 121 ELAKDLENQR-------------LNNNDKGKKVLSYQTETAGEVSEGNSSVSGTYNQEKL 167

Query: 539 DEMLAASIAAEEDGSFSPDASTSGAGVHYEEDEDDDE 649
           DEMLAAS+AAEEDG+F  D     AG+  EED+DDDE
Sbjct: 168 DEMLAASLAAEEDGNFVGD-----AGISNEEDDDDDE 199


>ref|XP_002875418.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321256|gb|EFH51677.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1463

 Score =  258 bits (659), Expect = 7e-67
 Identities = 147/260 (56%), Positives = 182/260 (70%), Gaps = 44/260 (16%)
 Frame = +2

Query: 2   MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 181
           MGV  LWELLAPVGRRVSVETLA K+LAIDASIWM+QF+KAMRDE G+M++NAHL+GFFR
Sbjct: 1   MGVQGLWELLAPVGRRVSVETLANKRLAIDASIWMVQFIKAMRDENGDMVQNAHLIGFFR 60

Query: 182 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 361
           RICKLLFLR KP+FVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLN+LK +RLK
Sbjct: 61  RICKLLFLRTKPIFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNRLKDIRLK 120

Query: 362 ELQKNLQEQR-QQDDSE--PKMVSSKIIEN------------------------------ 442
           E  K+++ QR +QDDS+   K VSS  +E+                              
Sbjct: 121 EQAKDIKNQRLKQDDSDRVKKRVSSDSVEDNLRVPEEEKLDEVSPASLVGEENGVDDIVK 180

Query: 443 ------AKGKRVVDE-----TIMANHLSEDENISAATCSREALDEMLAASIAAEEDGSFS 589
                  KGK V+ +       M ++L +D ++      +E LDEMLAAS+AAEE+G+F+
Sbjct: 181 ELTKDDPKGKGVLLDGDDLDNKMKSNLEQDSSVQGKDY-QEKLDEMLAASLAAEEEGNFT 239

Query: 590 PDASTSGAGVHYEEDEDDDE 649
             ASTS A +  EE+++D++
Sbjct: 240 SKASTSAAAIPSEEEDEDED 259


>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
           gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
           putative [Ricinus communis]
          Length = 1641

 Score =  257 bits (657), Expect = 1e-66
 Identities = 142/214 (66%), Positives = 170/214 (79%), Gaps = 1/214 (0%)
 Frame = +2

Query: 2   MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 181
           MGV  LW+LLAPVGRRVSVETL+GKKLAIDASIW++QFMKAMR+EKGEM+RNAHL+GFFR
Sbjct: 1   MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWIVQFMKAMRNEKGEMVRNAHLLGFFR 60

Query: 182 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 361
           RICKLL+LR KPVFVFDGATPALKRRTVIARRRQRE+AQ KIRKTAEKLLLN LK+MRLK
Sbjct: 61  RICKLLYLRTKPVFVFDGATPALKRRTVIARRRQRESAQAKIRKTAEKLLLNHLKSMRLK 120

Query: 362 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRV-VDETIMANHLSEDENISAATCSREAL 538
           EL K+L+ QR++            I++AKGK++ ++E+ + N+  + EN       +E L
Sbjct: 121 ELAKDLENQRRKQK----------IDDAKGKKILLEESKIENNDEDVENY-----DQEIL 165

Query: 539 DEMLAASIAAEEDGSFSPDASTSGAGVHYEEDED 640
           DEMLAASIAAE++  FS  AS S   V   E+ED
Sbjct: 166 DEMLAASIAAEDERRFSNTASAS--AVQDPENED 197


>ref|NP_566830.1| DNA repair protein UVH3 [Arabidopsis thaliana]
           gi|56749787|sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA
           repair protein UVH3; AltName: Full=ERCC5 homolog;
           AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3;
           Short=AtXPG; AltName: Full=UV hypersensitive protein 3;
           AltName: Full=XPG homolog gi|13649704|gb|AAK37472.1| UV
           hypersensitive protein [Arabidopsis thaliana]
           gi|332643872|gb|AEE77393.1| DNA repair protein UVH3
           [Arabidopsis thaliana]
          Length = 1479

 Score =  256 bits (655), Expect = 2e-66
 Identities = 148/264 (56%), Positives = 180/264 (68%), Gaps = 49/264 (18%)
 Frame = +2

Query: 2   MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 181
           MGV  LWELLAPVGRRVSVETLA K+LAIDASIWM+QF+KAMRDEKG+M++NAHL+GFFR
Sbjct: 1   MGVQGLWELLAPVGRRVSVETLANKRLAIDASIWMVQFIKAMRDEKGDMVQNAHLIGFFR 60

Query: 182 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 361
           RICKLLFLR KP+FVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLN+LK +RLK
Sbjct: 61  RICKLLFLRTKPIFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNRLKDIRLK 120

Query: 362 ELQKNLQEQR-QQDDSE--PKMVSSKIIE------------------------------- 439
           E  K+++ QR +QDDS+   K VSS  +E                               
Sbjct: 121 EQAKDIKNQRLKQDDSDRVKKRVSSDSVEDNLRVPVEEDDVGASFFQEEKLDEVSQASLV 180

Query: 440 ---------------NAKGKRVVDETIMANHLSEDENISAATCSREALDEMLAASIAAEE 574
                          + KGK V+ +    ++L +D ++      +E LDEMLAAS+AAEE
Sbjct: 181 GETGVDDVVKESVKDDPKGKGVLLDGDDLDNLVQDSSVQGKD-YQEKLDEMLAASLAAEE 239

Query: 575 DGSFSPDASTSGAGVHYEEDEDDD 646
           + +F+  ASTS A +  EEDE++D
Sbjct: 240 ERNFTSKASTSAAAIPSEEDEEED 263