BLASTX nr result

ID: Lithospermum22_contig00018088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018088
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281414.2| PREDICTED: methyl-CpG-binding domain-contain...    80   8e-13
emb|CAN67324.1| hypothetical protein VITISV_012829 [Vitis vinifera]    78   4e-12
ref|XP_002313451.1| methyl binding domain protein [Populus trich...    68   3e-09
ref|XP_002864630.1| hypothetical protein ARALYDRAFT_919168 [Arab...    62   2e-07

>ref|XP_002281414.2| PREDICTED: methyl-CpG-binding domain-containing protein 7-like
           [Vitis vinifera] gi|297746130|emb|CBI16186.3| unnamed
           protein product [Vitis vinifera]
          Length = 212

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 44/120 (36%), Positives = 68/120 (56%)
 Frame = -1

Query: 695 QYYYEPETGRRFRSHAAALRYLAESDETRPLSHSYEVLEENVPLSKMFKLEWHRKNSAPL 516
           +YYYEP TGR+FRS  +  R+L E+++    +H      +N   SK        KN++  
Sbjct: 110 KYYYEPGTGRQFRSLKSVQRHLIEANDC---THKPS---QNSDASK--------KNNSST 155

Query: 515 KKKTRIYDTYKSSFLKPPEKVKWVIASTQGDIWNAFVGETLVPDPVKNQWSKRFMLFMND 336
           K KT       S F+KPP+KV WV+    GD+W+ ++  + VP+ +K  W+K FML +N+
Sbjct: 156 KVKTST-----SHFIKPPKKVNWVLTGPGGDVWSPYINASAVPESIKQTWAKIFMLHVNE 210


>emb|CAN67324.1| hypothetical protein VITISV_012829 [Vitis vinifera]
          Length = 212

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 43/120 (35%), Positives = 67/120 (55%)
 Frame = -1

Query: 695 QYYYEPETGRRFRSHAAALRYLAESDETRPLSHSYEVLEENVPLSKMFKLEWHRKNSAPL 516
           +YYYEP  GR+FRS  +  R+L E+++    +H      +N   SK        KN++  
Sbjct: 110 KYYYEPGXGRQFRSLKSVQRHLIEANDC---THKPS---QNSDASK--------KNNSST 155

Query: 515 KKKTRIYDTYKSSFLKPPEKVKWVIASTQGDIWNAFVGETLVPDPVKNQWSKRFMLFMND 336
           K KT       S F+KPP+KV WV+    GD+W+ ++  + VP+ +K  W+K FML +N+
Sbjct: 156 KVKTST-----SHFIKPPKKVNWVLTGPGGDVWSPYINASAVPESIKQTWAKIFMLHVNE 210


>ref|XP_002313451.1| methyl binding domain protein [Populus trichocarpa]
           gi|222849859|gb|EEE87406.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 236

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
 Frame = -1

Query: 704 LLVQYYYEPETGRRFRSHAAALRYLAESDETRPLSHSYEVLEENVPLSKMFKLEWHRKNS 525
           ++ ++Y+EPETG+RFRS  +  +YL E  E      + +  +  +P       + H    
Sbjct: 120 IIDKHYFEPETGKRFRSLRSVEKYLTEGKEHIATLEALKAGDNFIPSKSSSSQKEHVS-- 177

Query: 524 APLKKKTRIYDTYKSSFLKP---PEKVKWVIASTQGDIWNAFVGETLVPDPVKNQWSKRF 354
              +KK       ++S L P   P K+KWV++   G +WN F+ ++LVP+ +K +WS+ F
Sbjct: 178 ---RKKV------ETSMLDPSSIPAKIKWVLSGPGGIVWNPFMDDSLVPEFIKQKWSETF 228

Query: 353 MLFMND 336
           +  + D
Sbjct: 229 VFSIID 234


>ref|XP_002864630.1| hypothetical protein ARALYDRAFT_919168 [Arabidopsis lyrata subsp.
           lyrata] gi|297310465|gb|EFH40889.1| hypothetical protein
           ARALYDRAFT_919168 [Arabidopsis lyrata subsp. lyrata]
          Length = 233

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 37/119 (31%), Positives = 50/119 (42%)
 Frame = -1

Query: 695 QYYYEPETGRRFRSHAAALRYLAESDETRPLSHSYEVLEENVPLSKMFKLEWHRKNSAPL 516
           +YYYEP TGR+FRS    L YL      R      + +E    LS  F+ +   +     
Sbjct: 110 KYYYEPNTGRKFRSRTEVLYYLEHGTSKRG---GTKKVENTDFLSDHFEGQGSNRARRKA 166

Query: 515 KKKTRIYDTYKSSFLKPPEKVKWVIASTQGDIWNAFVGETLVPDPVKNQWSKRFMLFMN 339
           K+           F  PPEKV W +A    + W   +G+  V D V+  WS  F    N
Sbjct: 167 KEPPPPPPPLDFDFKNPPEKVSWSMAKAGEEAWIPIIGDVKVQDSVRRDWSTAFTFITN 225


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