BLASTX nr result

ID: Lithospermum22_contig00018051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018051
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB61222.1| cyclin D3a [Antirrhinum majus]                        346   9e-93
ref|XP_002285001.1| PREDICTED: cyclin-D3-1 [Vitis vinifera] gi|3...   345   2e-92
dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]                       344   3e-92
emb|CAN79444.1| hypothetical protein VITISV_042479 [Vitis vinifera]   341   2e-91
gb|AAO13248.1|AF181993_1 cyclin D [Populus tremula x Populus tre...   340   5e-91

>emb|CAB61222.1| cyclin D3a [Antirrhinum majus]
          Length = 343

 Score =  346 bits (887), Expect = 9e-93
 Identities = 179/300 (59%), Positives = 229/300 (76%), Gaps = 7/300 (2%)
 Frame = -2

Query: 1103 LSLDALYCEEEQ-WD------DLKTEDFFSFEAINHSPPLLMQEDLFWEDEELINMLSKE 945
            L  DALYCEEEQ WD      D   E+   F  +     L   +D   + EEL ++L KE
Sbjct: 9    LCFDALYCEEEQNWDNGEIINDCFIEEQEPFSDLLKHDLLCGVDDDDDDKEELSSLLCKE 68

Query: 944  QENELCSTLLENPSMAKSRHDAIEWMLEVVGYYSFSALTASLAVNYFDRFLFCFKYYSEK 765
            QE EL   L +NPS+AK+R +A+EWM +V+GYYSFSALTA LAVNY DRFL  F++  +K
Sbjct: 69   QEYELYRVLEDNPSLAKARDEAVEWMFKVIGYYSFSALTAVLAVNYLDRFLCTFQFQQDK 128

Query: 764  PWMIQLTAVSCLSLAAKVEETHVPLLLDFQVKECKFVFEAKTIRRMEILVLSTLQWKMNP 585
            PWM QL AV+CLSLAAKVEET VPLLLD QV+E K+VFE+KTI+RME+LVLSTL+WKMNP
Sbjct: 129  PWMYQLAAVACLSLAAKVEETQVPLLLDLQVEESKYVFESKTIQRMELLVLSTLKWKMNP 188

Query: 584  VTPLSFIDFIIRRLGLMDRLSWEFLNKCERLLLAVISDCRFTVYLPSEMATATMLEVISN 405
            VTP+SF+++I RRL L   L  EFLN+CE LLL++I+DCRF  +LPS +ATATML VIS+
Sbjct: 189  VTPISFLEYIARRLALKSHLCKEFLNRCECLLLSLITDCRFMCHLPSALATATMLYVISS 248

Query: 404  LKPSTLLEFQEQLLAILGIDKGQVEECCRLIKEVASTIHWNSSSKRRLASLPKSPKGVMD 225
            L+P   +E+Q+QL+ ILGI+K +VEECC+LI+EVA+++H+ S +KR+  SLP SPKGV+D
Sbjct: 249  LEPCIGVEYQDQLINILGINKDKVEECCKLIQEVATSVHFQSGNKRKFGSLPYSPKGVVD 308


>ref|XP_002285001.1| PREDICTED: cyclin-D3-1 [Vitis vinifera] gi|302142269|emb|CBI19472.3|
            unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  345 bits (884), Expect = 2e-92
 Identities = 179/310 (57%), Positives = 228/310 (73%), Gaps = 12/310 (3%)
 Frame = -2

Query: 1118 KQDHHLS--LDALYCEEEQWDDL----------KTEDFFSFEAINHSPPLLMQEDLFWED 975
            +Q H+L   LD LYCEE  W++           + E ++S  +  ++PPLL + DL  ED
Sbjct: 11   QQPHNLPFLLDTLYCEENHWEEEVREEGFLEEEEEESYYSDGSKPNAPPLL-EPDLLCED 69

Query: 974  EELINMLSKEQENELCSTLLENPSMAKSRHDAIEWMLEVVGYYSFSALTASLAVNYFDRF 795
            EEL+++ SKE++N+L S    NP  A +R +A+EWML V  +YSFSALTA LAVNYFDRF
Sbjct: 70   EELVSLFSKEEKNDLHSNPESNPLAAGARSEAVEWMLRVNAHYSFSALTAVLAVNYFDRF 129

Query: 794  LFCFKYYSEKPWMIQLTAVSCLSLAAKVEETHVPLLLDFQVKECKFVFEAKTIRRMEILV 615
            LF      EKPWM QL AV+CLSLAAKVEET VPLLLD QV+E  +VFEAKTI+RMEI+V
Sbjct: 130  LFSCDVQGEKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEETMYVFEAKTIQRMEIMV 189

Query: 614  LSTLQWKMNPVTPLSFIDFIIRRLGLMDRLSWEFLNKCERLLLAVISDCRFTVYLPSEMA 435
            LSTL+WKMNPVTPLSF+D+I RRLGL + L WEFL +CERLLL+V+SDCRF  YLPS +A
Sbjct: 190  LSTLRWKMNPVTPLSFLDYITRRLGLKNHLCWEFLKRCERLLLSVLSDCRFGCYLPSVIA 249

Query: 434  TATMLEVISNLKPSTLLEFQEQLLAILGIDKGQVEECCRLIKEVASTIHWNSSSKRRLAS 255
            TA ML VI +++P   +++Q QLL ILGIDK +VE+C +LI ++AS+   +  +KR+ AS
Sbjct: 250  TAIMLHVIDSVEPCIRVQYQSQLLGILGIDKDKVEDCSQLILDIASSARCHHHNKRKFAS 309

Query: 254  LPKSPKGVMD 225
             P SP GVMD
Sbjct: 310  TPGSPNGVMD 319


>dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]
          Length = 371

 Score =  344 bits (883), Expect = 3e-92
 Identities = 180/320 (56%), Positives = 228/320 (71%), Gaps = 9/320 (2%)
 Frame = -2

Query: 1157 PQKMSHYHQTPFTKQDHHLSLDALYCEEEQWDDLKTEDFFSFEA---------INHSPPL 1005
            PQ        PF        LDALYC+E+  +  +TED+F  E          ++  PP 
Sbjct: 10   PQPQQQQQNLPFV-------LDALYCQEQHLEGGETEDYFDSEEEDCHYSDNIVSPKPPQ 62

Query: 1004 LMQEDLFWEDEELINMLSKEQENELCSTLLENPSMAKSRHDAIEWMLEVVGYYSFSALTA 825
            L+++DLFWEDEEL ++LSKEQEN L  +L  +PS+  +R  A+EW+L+V  +YSFSALTA
Sbjct: 63   LLEQDLFWEDEELTSLLSKEQENPLFHSLETDPSLGGARRAAVEWLLKVNAHYSFSALTA 122

Query: 824  SLAVNYFDRFLFCFKYYSEKPWMIQLTAVSCLSLAAKVEETHVPLLLDFQVKECKFVFEA 645
             LAVNY DRFLF F +  EKPWM QL AV+CLSLAAKVEET VPLLLD QV++ ++VFEA
Sbjct: 123  VLAVNYLDRFLFSFHFQREKPWMTQLAAVACLSLAAKVEETEVPLLLDLQVEDSRYVFEA 182

Query: 644  KTIRRMEILVLSTLQWKMNPVTPLSFIDFIIRRLGLMDRLSWEFLNKCERLLLAVISDCR 465
            KTI+RME+L+LSTLQWKMNPVTPLSF+D I RRLGL +RL  EFL +CE +LL +ISD R
Sbjct: 183  KTIQRMEMLILSTLQWKMNPVTPLSFLDHITRRLGLKNRLCCEFLKRCESILLCIISDSR 242

Query: 464  FTVYLPSEMATATMLEVISNLKPSTLLEFQEQLLAILGIDKGQVEECCRLIKEVASTIHW 285
            F +YLPS ++TATML V S+L+P   +E+Q QLL IL IDK +VE+C +L+ E  S IH 
Sbjct: 243  FMLYLPSVLSTATMLLVFSSLEPCLAVEYQNQLLGILQIDKDKVEDCYKLMLESTSGIH- 301

Query: 284  NSSSKRRLASLPKSPKGVMD 225
              S+KR+  S+P SP  V D
Sbjct: 302  -QSNKRKFRSMPGSPNCVTD 320


>emb|CAN79444.1| hypothetical protein VITISV_042479 [Vitis vinifera]
          Length = 419

 Score =  341 bits (875), Expect = 2e-91
 Identities = 179/310 (57%), Positives = 224/310 (72%), Gaps = 12/310 (3%)
 Frame = -2

Query: 1118 KQDHHLS--LDALYCEEEQWDDLKTEDFFSFEAINHS----------PPLLMQEDLFWED 975
            +Q H+L   LD LYCEE  W++   E+ F  E    S          PPLL + DL  ED
Sbjct: 11   QQPHNLPFLLDTLYCEESHWEEEVREEGFLEEEEEESYYGDGSKPNAPPLL-EPDLLCED 69

Query: 974  EELINMLSKEQENELCSTLLENPSMAKSRHDAIEWMLEVVGYYSFSALTASLAVNYFDRF 795
            EEL+++ SKE++N+L S    NP  A +R +A+EWML V  +YSFSALTA LAVNYFDRF
Sbjct: 70   EELVSLFSKEEKNDLHSNPESNPLAAGARSEAVEWMLRVNAHYSFSALTAVLAVNYFDRF 129

Query: 794  LFCFKYYSEKPWMIQLTAVSCLSLAAKVEETHVPLLLDFQVKECKFVFEAKTIRRMEILV 615
            LF      EKPWM QL AV+CLSLAAKVEET VPLLLD QV+E  +VFEAKTI+RMEI+V
Sbjct: 130  LFSCDVQGEKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEETMYVFEAKTIQRMEIMV 189

Query: 614  LSTLQWKMNPVTPLSFIDFIIRRLGLMDRLSWEFLNKCERLLLAVISDCRFTVYLPSEMA 435
            LSTL+WKMNPVTPLSF+D+I RRLGL + L WEFL +CER+LL+V+SDCRF  YLPS +A
Sbjct: 190  LSTLRWKMNPVTPLSFLDYITRRLGLKNHLCWEFLKRCERVLLSVLSDCRFGCYLPSVIA 249

Query: 434  TATMLEVISNLKPSTLLEFQEQLLAILGIDKGQVEECCRLIKEVASTIHWNSSSKRRLAS 255
            TA ML VI +++P    ++Q QLL ILGIDK +VE+C +LI ++AS+   +  +KR+ +S
Sbjct: 250  TAIMLHVIDSVEPCIRAQYQSQLLGILGIDKDKVEDCSQLILDIASSARCHHHNKRKFSS 309

Query: 254  LPKSPKGVMD 225
             P SP GVMD
Sbjct: 310  TPGSPNGVMD 319


>gb|AAO13248.1|AF181993_1 cyclin D [Populus tremula x Populus tremuloides]
          Length = 376

 Score =  340 bits (872), Expect = 5e-91
 Identities = 175/310 (56%), Positives = 226/310 (72%), Gaps = 12/310 (3%)
 Frame = -2

Query: 1118 KQDHHLSLDALYCEEEQWDDLKTEDFFSFEAINHSP-----------PLLMQEDLFWEDE 972
            +Q+  L  DALYC EE W +   ED+F  E    S            P+L+++DL WEDE
Sbjct: 16   QQNPTLLYDALYCSEENWVEEVREDWFQDELEGESYCSNNSNKLNTFPILLEQDLSWEDE 75

Query: 971  ELINMLSKEQENELCSTLLENPSMAKSRHDAIEWMLEVVGYYSFSALTASLAVNYFDRFL 792
            EL ++ +KE++N+LC  L  NPS+A++R +A+EW+L+V  +YSF+ALTA LAVNY DRFL
Sbjct: 76   ELSSLFAKEEQNQLCKDLETNPSLARARCEAVEWILKVNEHYSFTALTAVLAVNYLDRFL 135

Query: 791  FCFKYYSEKPWMIQLTAVSCLSLAAKVEETHVPLLLDFQVKECKFVFEAKTIRRMEILVL 612
            F      EKPWM QL AVSCLSLAAKVEET VPLLLDFQV++ K+VFEAKTI+RMEILVL
Sbjct: 136  FSVHLQKEKPWMAQLAAVSCLSLAAKVEETQVPLLLDFQVEDSKYVFEAKTIQRMEILVL 195

Query: 611  STLQWKMNPVTPLSFIDFIIRRLGLMDRLSWEFLNKCERLLLAVISDCRFTVYLPSEMAT 432
            STL+WKMNPVTP+SF+D+I RRLGL   L  EFL +CER++L++++D R   Y+PS MA 
Sbjct: 196  STLKWKMNPVTPISFLDYITRRLGLEHYLCLEFLKRCERMVLSILADSRSMPYVPSVMAA 255

Query: 431  ATMLEVISNLKPSTLLEFQEQLLAILGIDKGQVEECCRLIKEVASTIHWN-SSSKRRLAS 255
            ATML VI N++PS   E+Q QLL+ILGIDK +VE+C + + E A   H+   S+KR+  S
Sbjct: 256  ATMLYVIDNIEPSLAAEYQSQLLSILGIDKDKVEDCSKFLMEFALRDHFKLLSNKRKFCS 315

Query: 254  LPKSPKGVMD 225
            LP SP GV+D
Sbjct: 316  LPGSPSGVVD 325


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