BLASTX nr result

ID: Lithospermum22_contig00017957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017957
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    89   5e-16
ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [S...    77   1e-12
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    75   5e-12
gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japo...    75   7e-12
gb|ABA94593.2| retrotransposon protein, putative, unclassified [...    75   7e-12

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/111 (37%), Positives = 67/111 (60%)
 Frame = -2

Query: 340 YWQVRTKDKHLKEGDKNTRYFHASTMVRRRRNLLLSLEDDGGVYHEGVEKVEEIVLQYFS 161
           YW  R +   +++GDKNT+YFH     R+RRN +  L D+ GV+ +G E++  +V  YF 
Sbjct: 338 YWHARARANEIRDGDKNTKYFHHKASQRKRRNTINELLDENGVWKKGREEICGVVQHYFE 397

Query: 160 IVFGANQDTQLELATQ*VSHRVSEDMNQ*LTRVITSEEMKHAVFEMPADKS 8
            +F  +    +ELA + +SH VS DMN  L  + + +E+K A+F M  +K+
Sbjct: 398 GLFATDSPVNMELALEGLSHCVSTDMNTALLMLPSGDEVKEALFAMHPNKA 448


>ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor]
           gi|241918649|gb|EER91793.1| hypothetical protein
           SORBIDRAFT_01g026845 [Sorghum bicolor]
          Length = 295

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/106 (36%), Positives = 58/106 (54%)
 Frame = -2

Query: 340 YWQVRTKDKHLKEGDKNTRYFHASTMVRRRRNLLLSLEDDGGVYHEGVEKVEEIVLQYFS 161
           YW  R +   LK GDKNT +FH   + R++RNL+  L DD G++HE ++ +  +V  YF 
Sbjct: 130 YWVQRARANWLKHGDKNTNFFHHFALSRKKRNLVKGLVDDQGIFHEDIDTMGTMVKDYFG 189

Query: 160 IVFGANQDTQLELATQ*VSHRVSEDMNQ*LTRVITSEEMKHAVFEM 23
            +F        +     V  RV+ +MNQ L    T EE+K A+F +
Sbjct: 190 TLFTREVLDVEDGVLNDVDRRVTNEMNQALLEPFTREEVKKALFSI 235


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/112 (34%), Positives = 61/112 (54%)
 Frame = -2

Query: 343 KYWQVRTKDKHLKEGDKNTRYFHASTMVRRRRNLLLSLEDDGGVYHEGVEKVEEIVLQYF 164
           ++W+ R++   L  GD+NT YFHA T  RR +N L  +ED  GV      ++ +I+  YF
Sbjct: 229 QFWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRLTVMEDINGVAQHEEHQISQIISGYF 288

Query: 163 SIVFGANQDTQLELATQ*VSHRVSEDMNQ*LTRVITSEEMKHAVFEMPADKS 8
             +F +  D    +  + +   VS+  N  LTR+   EE+K AVF + A K+
Sbjct: 289 QQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKA 340


>gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
          Length = 1102

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/105 (32%), Positives = 59/105 (56%)
 Frame = -2

Query: 337  WQVRTKDKHLKEGDKNTRYFHASTMVRRRRNLLLSLEDDGGVYHEGVEKVEEIVLQYFSI 158
            W  R++   LKEGD+NTR+FH+  + R ++N + SL+D  G  H     +E++  +YF  
Sbjct: 756  WLQRSRINWLKEGDRNTRFFHSKAVWRAKKNRIQSLKDSAGTVHRSATAMEQLATEYFQE 815

Query: 157  VFGANQDTQLELATQ*VSHRVSEDMNQ*LTRVITSEEMKHAVFEM 23
            V+ A+      + +     +VS  MN+ L   +T EE+  A+F++
Sbjct: 816  VYSADPSLDHSIVSSFFQSKVSAQMNEALCSDLTEEEISTAIFQI 860


>gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1469

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/105 (32%), Positives = 59/105 (56%)
 Frame = -2

Query: 337  WQVRTKDKHLKEGDKNTRYFHASTMVRRRRNLLLSLEDDGGVYHEGVEKVEEIVLQYFSI 158
            W  R++   LKEGD+NTR+FH+  + R ++N + SL+D  G  H     +E++  +YF  
Sbjct: 749  WLQRSRINWLKEGDRNTRFFHSKAVWRAKKNRIQSLKDSAGTVHRSATAMEQLATEYFQE 808

Query: 157  VFGANQDTQLELATQ*VSHRVSEDMNQ*LTRVITSEEMKHAVFEM 23
            V+ A+      + +     +VS  MN+ L   +T EE+  A+F++
Sbjct: 809  VYSADPSLDHSIVSSFFQSKVSAQMNEALCSDLTEEEISTAIFQI 853


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