BLASTX nr result

ID: Lithospermum22_contig00017950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017950
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]   106   4e-21
ref|XP_002513066.1| conserved hypothetical protein [Ricinus comm...   104   2e-20
ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vit...   101   2e-19
ref|XP_002303924.1| chromatin remodeling complex subunit [Populu...   100   4e-19
ref|XP_004157509.1| PREDICTED: F-box protein At3g54460-like [Cuc...    98   2e-18

>emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]
          Length = 1208

 Score =  106 bits (265), Expect = 4e-21
 Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
 Frame = -1

Query: 710  VISRAHRMGATQPIHVETLAMSGTIEEQMLRFLQDADECRKLLKED-----QDYVRRCRS 546
            VISRAHRMGAT+PI VETLAM GTIEEQML FLQDADECR+ LKE+      + VR  RS
Sbjct: 1127 VISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQDADECRRFLKEEFGKPYSEGVRAHRS 1186

Query: 545  IHEFAESNYLSQLCFVQTS 489
            +H+FAESNYL+ L FV+T+
Sbjct: 1187 LHDFAESNYLAHLSFVRTN 1205


>ref|XP_002513066.1| conserved hypothetical protein [Ricinus communis]
            gi|223548077|gb|EEF49569.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1322

 Score =  104 bits (259), Expect = 2e-20
 Identities = 54/76 (71%), Positives = 61/76 (80%), Gaps = 5/76 (6%)
 Frame = -1

Query: 710  VISRAHRMGATQPIHVETLAMSGTIEEQMLRFLQDADECRKLLKE-----DQDYVRRCRS 546
            VISRAHRMGAT+P+ VETLAM GTIEEQML FLQDADECRKLLKE     D +  R  RS
Sbjct: 1241 VISRAHRMGATRPVQVETLAMRGTIEEQMLEFLQDADECRKLLKEEFRKPDHEGARPRRS 1300

Query: 545  IHEFAESNYLSQLCFV 498
            +H+FAE NYL++L FV
Sbjct: 1301 LHDFAERNYLARLSFV 1316


>ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vitis vinifera]
          Length = 1408

 Score =  101 bits (251), Expect = 2e-19
 Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 5/81 (6%)
 Frame = -1

Query: 710  VISRAHRMGATQPIHVETLAMSGTIEEQMLRFLQDADECRKLLKED-----QDYVRRCRS 546
            VISRAHRMGAT+PI VETLAM GTIEEQML FLQDADECR+ LKE+      + VR  RS
Sbjct: 1316 VISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQDADECRRFLKEEFGKPYSEGVRAHRS 1375

Query: 545  IHEFAESNYLSQLCFVQTSFL 483
            +H+FAESNYL+    +++++L
Sbjct: 1376 LHDFAESNYLAHHDLLESNYL 1396


>ref|XP_002303924.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222841356|gb|EEE78903.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1333

 Score =  100 bits (248), Expect = 4e-19
 Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 5/78 (6%)
 Frame = -1

Query: 710  VISRAHRMGATQPIHVETLAMSGTIEEQMLRFLQDADECRKLLKE-----DQDYVRRCRS 546
            VISRAHRMGAT+PI+VETLAM GTIEEQML FLQDAD CR++LKE     D    R  RS
Sbjct: 1252 VISRAHRMGATRPINVETLAMRGTIEEQMLEFLQDADGCRRVLKEESSKTDHAGARLHRS 1311

Query: 545  IHEFAESNYLSQLCFVQT 492
            +H+FAES+YL+ L FV T
Sbjct: 1312 LHDFAESDYLAHLSFVHT 1329


>ref|XP_004157509.1| PREDICTED: F-box protein At3g54460-like [Cucumis sativus]
          Length = 1366

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 51/78 (65%), Positives = 61/78 (78%), Gaps = 5/78 (6%)
 Frame = -1

Query: 710  VISRAHRMGATQPIHVETLAMSGTIEEQMLRFLQDADECRKLLKE-----DQDYVRRCRS 546
            VISRAHRMGA +PIHVETL M  TIEEQM++FLQD DEC++L+KE     D +  R  RS
Sbjct: 1278 VISRAHRMGAIRPIHVETLVMHETIEEQMVQFLQDPDECKRLMKEEFGKPDYEGPRAHRS 1337

Query: 545  IHEFAESNYLSQLCFVQT 492
            +H+FA SNYLSQL FV+T
Sbjct: 1338 LHDFAGSNYLSQLKFVRT 1355


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