BLASTX nr result

ID: Lithospermum22_contig00017932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017932
         (3071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...    70   5e-09
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...    68   1e-08
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...    68   1e-08
emb|CBI23047.3| unnamed protein product [Vitis vinifera]               68   1e-08
ref|XP_002317799.1| oligopeptide transporter OPT family [Populus...    49   2e-08

>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223545062|gb|EEF46575.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 232

 Score = 69.7 bits (169), Expect = 5e-09
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = -2

Query: 1873 LAGYKFDEHDRNSVYLRLQFARYPGARSSSGHRGKR 1766
            L GYKFDEHDR+SV+LRLQFARYPGARS  GHRGKR
Sbjct: 197  LQGYKFDEHDRDSVHLRLQFARYPGARSGGGHRGKR 232


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = -2

Query: 1873 LAGYKFDEHDRNSVYLRLQFARYPGARSSSGHRGKR 1766
            L GYKFDEHDR+SV LRLQFARYPGARS  GHRGKR
Sbjct: 198  LQGYKFDEHDRDSVSLRLQFARYPGARSGGGHRGKR 233


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = -2

Query: 1873 LAGYKFDEHDRNSVYLRLQFARYPGARSSSGHRGKR 1766
            L GYKFDEHDR+SV LRLQFARYPGARS  GHRGKR
Sbjct: 194  LQGYKFDEHDRDSVNLRLQFARYPGARSGGGHRGKR 229


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = -2

Query: 1873 LAGYKFDEHDRNSVYLRLQFARYPGARSSSGHRGKR 1766
            L GYKFDEHDR+SV LRLQFARYPGARS  GHRGKR
Sbjct: 195  LQGYKFDEHDRDSVNLRLQFARYPGARSGGGHRGKR 230


>ref|XP_002317799.1| oligopeptide transporter OPT family [Populus trichocarpa]
           gi|222858472|gb|EEE96019.1| oligopeptide transporter OPT
           family [Populus trichocarpa]
          Length = 723

 Score = 48.9 bits (115), Expect(3) = 2e-08
 Identities = 24/39 (61%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = -3

Query: 570 LTHMPVL-GCSAKTPPASAVNYTSCIITLFVSGFVVLRY 457
           L HMPVL G ++  PPASAVNYTS I+  F+SG+V+ RY
Sbjct: 615 LIHMPVLLGATSMMPPASAVNYTSWIVVGFLSGYVLFRY 653



 Score = 30.8 bits (68), Expect(3) = 2e-08
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 452 KWWQCYKYVLYGSCDAGTGW 393
           +WW+ Y YVL G  DAGT +
Sbjct: 656 EWWKRYNYVLSGGLDAGTAF 675



 Score = 26.9 bits (58), Expect(3) = 2e-08
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 397 DGVSLDACPTTKGISVDG 344
           +G  L +CPT KGI VDG
Sbjct: 702 EGCLLASCPTAKGIIVDG 719


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