BLASTX nr result

ID: Lithospermum22_contig00017914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017914
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512...   205   5e-51
gb|ABK92824.1| unknown [Populus trichocarpa]                          204   1e-50
ref|XP_002305525.1| predicted protein [Populus trichocarpa] gi|2...   202   3e-50
ref|XP_003517160.1| PREDICTED: SKP1-like protein 1A-like [Glycin...   202   3e-50
gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536...   201   8e-50

>ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1,
           putative [Ricinus communis]
          Length = 157

 Score =  205 bits (521), Expect = 5e-51
 Identities = 106/159 (66%), Positives = 123/159 (77%), Gaps = 7/159 (4%)
 Frame = -3

Query: 578 MSTSERKKITLKSYDGEEFIVDEAVALQSQTIKHMIEDDCVDDVIPVPNVAGNILAKVIE 399
           MSTS  +KITLKS DGE F VDEAVAL+SQTIKHMIEDDC D+ IP+PNV   IL+KVIE
Sbjct: 1   MSTS--RKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIE 58

Query: 398 YCKKHVE-------PTSXXXXXXXXXXXXFKVDQSTLLEIVLAANYLNIKSLLEHTCRSI 240
           YCKKHVE       P+S             KVDQ+TL +++LAANYLNIKSLL+ TC+++
Sbjct: 59  YCKKHVETSKSDDRPSSVDDELKTWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTV 118

Query: 239 ADMIKDKTPEEIRQIFNIKNDFTPEEEAEIRKENSWAFE 123
           ADMIK KTPEEIR+ FNIKNDFTPEEE E+R+EN WAFE
Sbjct: 119 ADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>gb|ABK92824.1| unknown [Populus trichocarpa]
          Length = 161

 Score =  204 bits (518), Expect = 1e-50
 Identities = 103/160 (64%), Positives = 119/160 (74%), Gaps = 11/160 (6%)
 Frame = -3

Query: 569 SERKKITLKSYDGEEFIVDEAVALQSQTIKHMIEDDCVDDVIPVPNVAGNILAKVIEYCK 390
           SE KKITLKS DGE F+VDEAVA++SQTIKHMIEDDC D+ IP+PNV   ILAKVIEYCK
Sbjct: 2   SESKKITLKSSDGETFVVDEAVAVESQTIKHMIEDDCADNEIPLPNVTSKILAKVIEYCK 61

Query: 389 KHVEP-----------TSXXXXXXXXXXXXFKVDQSTLLEIVLAANYLNIKSLLEHTCRS 243
           KHVE            T              KVDQ+TL +++LAANYLNIK LL+ TC++
Sbjct: 62  KHVEAGSDKEKNVTGVTEKDESLKSWDTEFVKVDQNTLFDLILAANYLNIKGLLDLTCQT 121

Query: 242 IADMIKDKTPEEIRQIFNIKNDFTPEEEAEIRKENSWAFE 123
           +ADMIK KTPEEIR+ FNIKNDFTPEEE E+R+EN WAFE
Sbjct: 122 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 161


>ref|XP_002305525.1| predicted protein [Populus trichocarpa] gi|222848489|gb|EEE86036.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  202 bits (515), Expect = 3e-50
 Identities = 103/160 (64%), Positives = 119/160 (74%), Gaps = 11/160 (6%)
 Frame = -3

Query: 569 SERKKITLKSYDGEEFIVDEAVALQSQTIKHMIEDDCVDDVIPVPNVAGNILAKVIEYCK 390
           SE KKITLKS DGE F+VDEAVA++SQTIKHMIEDDC D+ IP+PNV   ILAKVIEYCK
Sbjct: 2   SESKKITLKSSDGETFVVDEAVAVESQTIKHMIEDDCADNEIPLPNVTSKILAKVIEYCK 61

Query: 389 KHVEPTSXXXXXXXXXXXXF-----------KVDQSTLLEIVLAANYLNIKSLLEHTCRS 243
           KHVE  S                        KVDQ+TL +++LAANYLNIK LL+ TC++
Sbjct: 62  KHVEAGSDKEKNVTGVAEKDESLKSWDTEFVKVDQNTLFDLILAANYLNIKGLLDLTCQT 121

Query: 242 IADMIKDKTPEEIRQIFNIKNDFTPEEEAEIRKENSWAFE 123
           +ADMIK KTPEEIR+ FNIKNDFTPEEE E+R+EN WAFE
Sbjct: 122 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 161


>ref|XP_003517160.1| PREDICTED: SKP1-like protein 1A-like [Glycine max]
          Length = 155

 Score =  202 bits (514), Expect = 3e-50
 Identities = 103/154 (66%), Positives = 118/154 (76%), Gaps = 5/154 (3%)
 Frame = -3

Query: 569 SERKKITLKSYDGEEFIVDEAVALQSQTIKHMIEDDCVDDVIPVPNVAGNILAKVIEYCK 390
           S  KKITLKS DGE F VDEAVAL+SQTIKHMIEDDC D  IP+PNV   ILAKVIEYCK
Sbjct: 2   SSAKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCK 61

Query: 389 KHVEPTSXXXXXXXXXXXXF-----KVDQSTLLEIVLAANYLNIKSLLEHTCRSIADMIK 225
           KHVE  +            +     KVDQ+TL +++LAANYLNIKSLL+ TC+++ADMIK
Sbjct: 62  KHVEAANPEDKPSEDDLKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIK 121

Query: 224 DKTPEEIRQIFNIKNDFTPEEEAEIRKENSWAFE 123
            KTPEEIR+ FNIKNDFTPEEE E+R+EN WAFE
Sbjct: 122 GKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155


>gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like
           protein [Gossypium hirsutum]
          Length = 156

 Score =  201 bits (511), Expect = 8e-50
 Identities = 102/155 (65%), Positives = 118/155 (76%), Gaps = 5/155 (3%)
 Frame = -3

Query: 572 TSERKKITLKSYDGEEFIVDEAVALQSQTIKHMIEDDCVDDVIPVPNVAGNILAKVIEYC 393
           +S  +KITLKS DGE F VDEAVAL+SQTIKHMIEDDC D+ IP+PNV   ILAKVIEYC
Sbjct: 2   SSSGRKITLKSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC 61

Query: 392 KKHVEPT-----SXXXXXXXXXXXXFKVDQSTLLEIVLAANYLNIKSLLEHTCRSIADMI 228
           KKHVE       S             KVDQ+TL +++LAANYLNIK LL+ TC+++ADMI
Sbjct: 62  KKHVEAPKTDDRSADDELKSWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMI 121

Query: 227 KDKTPEEIRQIFNIKNDFTPEEEAEIRKENSWAFE 123
           K KTPEEIR+ FNIKNDFTPEEE E+R+EN WAFE
Sbjct: 122 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156


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