BLASTX nr result

ID: Lithospermum22_contig00017892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017892
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...    59   1e-06
emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera]    58   2e-06

>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
           vinifera]
          Length = 1764

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 29/156 (18%)
 Frame = +2

Query: 329 MAFYRNGK---FGQRAMDEINKGPSISRVHEVVGDEEVEAASSD---------------- 451
           MAF+RN       Q  +DE  +G +I RVH  V +E V+A SS+                
Sbjct: 1   MAFFRNYSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGD 60

Query: 452 -NDGNME--------FGSRANSLHSSVGRTVATGNRGSSFWKDPQSVPLNGVTQSGEEFK 604
            ND  ++         G R ++L  S  RT   G  GS+FWKD Q +     ++S ++ K
Sbjct: 61  TNDAGLQNEAAAADDIGLRISNLQPSGRRTAMAGKWGSTFWKDCQPMGHRNGSESEQDSK 120

Query: 605 SSSECKNXXXXXXXXXXXXXXXXXGKSRS-IPADEM 709
              +CKN                  K ++ +PADEM
Sbjct: 121 CRFDCKNEEALEDNSSDGREVDKVQKGQNDVPADEM 156


>emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera]
          Length = 626

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 26/150 (17%)
 Frame = +2

Query: 338 YRNGKFGQRAMDEINKGPSISRVHEVVGDEEVEAASSD-----------------NDGNM 466
           Y N    Q  +DE  +G +I RVH  V +E V+A SS+                 ND  +
Sbjct: 48  YSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGDTNDAGL 107

Query: 467 E--------FGSRANSLHSSVGRTVATGNRGSSFWKDPQSVPLNGVTQSGEEFKSSSECK 622
           +         G R ++L  S  RT   G  GS+FWKD Q +     ++S ++ K   +CK
Sbjct: 108 QNEAAAADDIGLRISNLQPSGRRTAMAGKWGSTFWKDCQPMGHRNGSESEQDSKCRFDCK 167

Query: 623 NXXXXXXXXXXXXXXXXXGKSRS-IPADEM 709
           N                  K ++ +PADEM
Sbjct: 168 NEEALEDNSSDGREVDKVQKGQNDVPADEM 197


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