BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017830
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini...   134   1e-29
emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera]   134   1e-29
emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]                   123   1e-26
gb|AAT08172.1| Hin19 [Nicotiana tabacum]                              120   1e-25
ref|XP_002531919.1| RNA and export factor binding protein, putat...   120   2e-25

>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
           gi|296087136|emb|CBI33510.3| unnamed protein product
           [Vitis vinifera]
          Length = 269

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/102 (64%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
 Frame = +2

Query: 5   GVSNEDIRELFSEIGELVRYGIHYDKNGSPCGSAEVVYARRSDAFQAVKKYNNTQFHGKP 184
           GV+NEDIRELFSEIG++ RY +HY+KNG P GSAEVVY RRSDAF AVK+YNN    GKP
Sbjct: 106 GVTNEDIRELFSEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKP 165

Query: 185 MKIENLGSIVMAHVASRLTVVGGANG--RRTVLKTPGTGYTR 304
           MKIE +GS     V++R+ V+GG NG  RRTV+ TPG G+ R
Sbjct: 166 MKIEIIGSDSDMPVSARVNVIGGVNGKRRRTVVMTPGVGHAR 207


>emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera]
          Length = 348

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/102 (64%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
 Frame = +2

Query: 5   GVSNEDIRELFSEIGELVRYGIHYDKNGSPCGSAEVVYARRSDAFQAVKKYNNTQFHGKP 184
           GV+NEDIRELFSEIG++ RY +HY+KNG P GSAEVVY RRSDAF AVK+YNN    GKP
Sbjct: 135 GVTNEDIRELFSEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKP 194

Query: 185 MKIENLGSIVMAHVASRLTVVGGANG--RRTVLKTPGTGYTR 304
           MKIE +GS     V++R+ V+GG NG  RRTV+ TPG G+ R
Sbjct: 195 MKIEIIGSDSDMPVSARVNVIGGVNGKRRRTVVMTPGVGHAR 236


>emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]
          Length = 275

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/100 (62%), Positives = 76/100 (76%)
 Frame = +2

Query: 5   GVSNEDIRELFSEIGELVRYGIHYDKNGSPCGSAEVVYARRSDAFQAVKKYNNTQFHGKP 184
           GV+N DIRELFSEIGEL+RY IHYDKNG P G+AEVV+ARRSDA+QA+K+YNN Q  GKP
Sbjct: 107 GVTNSDIRELFSEIGELIRYAIHYDKNGRPSGAAEVVFARRSDAYQALKRYNNVQLDGKP 166

Query: 185 MKIENLGSIVMAHVASRLTVVGGANGRRTVLKTPGTGYTR 304
           MKIE +       +++R+  VG  NGRRTV+  PG+   R
Sbjct: 167 MKIEVVAPPTDMPLSARVD-VGRGNGRRTVVMMPGSARGR 205


>gb|AAT08172.1| Hin19 [Nicotiana tabacum]
          Length = 219

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/100 (61%), Positives = 75/100 (75%)
 Frame = +2

Query: 5   GVSNEDIRELFSEIGELVRYGIHYDKNGSPCGSAEVVYARRSDAFQAVKKYNNTQFHGKP 184
           GV+N DIRELFSEIGEL+RY IHYDKNG P G+AEVV+ARRSDA+QA K+YNN Q  GKP
Sbjct: 50  GVTNSDIRELFSEIGELIRYAIHYDKNGRPSGAAEVVFARRSDAYQAHKRYNNVQLDGKP 109

Query: 185 MKIENLGSIVMAHVASRLTVVGGANGRRTVLKTPGTGYTR 304
           MKIE +       +++R+  VG  +GRRTV+  PG+   R
Sbjct: 110 MKIEVVAPSTGMPLSARVD-VGRGSGRRTVVTLPGSARGR 148


>ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223528429|gb|EEF30463.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 268

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/102 (62%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
 Frame = +2

Query: 5   GVSNEDIRELFSEIGELVRYGIHYDKNGSPCGSAEVVYARRSDAFQAVKKYNNTQFHGKP 184
           GVSNEDIRELF+EIG+L RY +HYDKNG   GSAEVVY RRS+AF A+KKYNN    GKP
Sbjct: 105 GVSNEDIRELFAEIGDLKRYAVHYDKNGRSTGSAEVVYTRRSEAFAALKKYNNVLLDGKP 164

Query: 185 MKIENLGSIVMAHVASRLTVVGGANGR--RTVLKTPGTGYTR 304
           MKIE +G    A +++R+ V  G NGR  RTV+ TPG G  R
Sbjct: 165 MKIEIVGVTGEAPISARVNVT-GINGRRKRTVVMTPGPGRGR 205