BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017788
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...    81   1e-13
ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphat...    79   4e-13
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    77   2e-12
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma...    77   2e-12
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...    75   8e-12

>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 51/125 (40%), Positives = 65/125 (52%)
 Frame = -3

Query: 407 DVEEGEISDTASIEEISEKDFLKENEVSSFSSVSTIADVAADVIXXXXXXXXXXXXXXXX 228
           D EEGEISD+AS+EEISE  F +++  ++  S ++   +A++                  
Sbjct: 9   DAEEGEISDSASVEEISEDAFNRQDPPTT--STTSKIKIASN------------------ 48

Query: 227 XXXXXXXXXXXXXXXXXXXXXXNQRVWTMRDLYKYQISRKYAPGLYNLAWAQAVQNKPLG 48
                                   RVWTMRD+YKY ISR YA GLYNLAWAQAVQNKPL 
Sbjct: 49  -------------ENQNQNSTTATRVWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLD 95

Query: 47  EVLDM 33
           E+  M
Sbjct: 96  ELFVM 100


>ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula] gi|355496659|gb|AES77862.1| RNA
           polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula]
          Length = 1213

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 56/135 (41%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
 Frame = -3

Query: 419 KEEVDVEEGEISDTASIEEISEKDFLKENEVSSFSSVSTIADVAADVIXXXXXXXXXXXX 240
           KE  DVEEGEISD+AS+EEI+E+DF K ++V   +S     DV  D              
Sbjct: 20  KEVEDVEEGEISDSASLEEITEEDFKKGDDVKVNNS-----DVKTD-------------- 60

Query: 239 XXXXXXXXXXXXXXXXXXXXXXXXXXNQRVWTMRDLY-KYQ-ISRKYAPGLYNLAWAQAV 66
                                     + RVW ++DLY KY  I R YA GLYNLAWAQAV
Sbjct: 61  ----------KSDNKVKTGGGGGGGGDSRVWAVQDLYSKYPTICRGYASGLYNLAWAQAV 110

Query: 65  QNKPLGEVLDMECGK 21
           QNKPL ++  ME  K
Sbjct: 111 QNKPLNDIFVMELDK 125


>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 3-like [Cucumis sativus]
          Length = 1249

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 57/141 (40%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
 Frame = -3

Query: 446 MEQEEAIVIKEEVDVEEGEISDTASIEEISEKDFLKENEVSSFSSVSTIADVAADVIXXX 267
           M ++E + I+   DVEEGEISDTAS+EEISE+DF K +  +S   V    D   +     
Sbjct: 1   MGKDEILKIE---DVEEGEISDTASVEEISEEDFNKLDSSASPKVVVPSKDSNRET---- 53

Query: 266 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRVWTMRDLYK-YQISRK-YAPGL 93
                                                RVWTM DLYK Y   R  YA GL
Sbjct: 54  -------------------------------------RVWTMSDLYKNYPAMRHGYASGL 76

Query: 92  YNLAWAQAVQNKPLGEVLDME 30
           YNLAWAQAVQNKPL ++  ME
Sbjct: 77  YNLAWAQAVQNKPLNDIFVME 97


>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Cucumis sativus]
          Length = 1249

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 57/141 (40%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
 Frame = -3

Query: 446 MEQEEAIVIKEEVDVEEGEISDTASIEEISEKDFLKENEVSSFSSVSTIADVAADVIXXX 267
           M ++E + I+   DVEEGEISDTAS+EEISE+DF K +  +S   V    D   +     
Sbjct: 1   MGKDEILKIE---DVEEGEISDTASVEEISEEDFNKLDSSASPKVVVPSKDSNRET---- 53

Query: 266 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRVWTMRDLYK-YQISRK-YAPGL 93
                                                RVWTM DLYK Y   R  YA GL
Sbjct: 54  -------------------------------------RVWTMSDLYKNYPAMRHGYASGL 76

Query: 92  YNLAWAQAVQNKPLGEVLDME 30
           YNLAWAQAVQNKPL ++  ME
Sbjct: 77  YNLAWAQAVQNKPLNDIFVME 97


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Vitis vinifera]
          Length = 1238

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 57/142 (40%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
 Frame = -3

Query: 443 EQEEAIVIKEEVDVEEGEISDTASIEEISEKDFLKENEVSSFSSVSTIADVAADVIXXXX 264
           E+E  I++  E DVEEGEISD+AS+EEISE+DF K+ EV         AD          
Sbjct: 3   EKENNIMMGIE-DVEEGEISDSASVEEISEEDFNKQ-EVRVLREAKPKADT--------- 51

Query: 263 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRVWTMRDL---YKY-QISRKYAPG 96
                                               RVWTMRDL   YKY Q    Y P 
Sbjct: 52  ------------------------------------RVWTMRDLQDLYKYHQACSGYTPR 75

Query: 95  LYNLAWAQAVQNKPLGEVLDME 30
           LYNLAWAQAVQNKPL ++  M+
Sbjct: 76  LYNLAWAQAVQNKPLNDIFVMD 97