BLASTX nr result

ID: Lithospermum22_contig00017741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017741
         (1733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V...   313   e-151
ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis tha...   307   e-149
ref|XP_002515195.1| peptide chain release factor, putative [Rici...   308   e-149
ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arab...   303   e-147
ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-li...   304   e-144

>ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
            gi|297744098|emb|CBI37068.3| unnamed protein product
            [Vitis vinifera]
          Length = 392

 Score =  313 bits (802), Expect(2) = e-151
 Identities = 156/172 (90%), Positives = 166/172 (96%)
 Frame = +2

Query: 890  VQRVPVTEKSGRIHTSAVSVAILPQADQVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV 1069
            VQRVPVTEKSGR+HTSAVSVAILPQAD+VDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV
Sbjct: 209  VQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV 268

Query: 1070 RITHIPSGLIVAIQDERSQHMNKAKALKVLCARLYEIERSRMQASRSKLRSDQIGSGDRS 1249
            RITHIPSG+ VAIQDERSQHMNKAKALKVLCA+LYEIERSR+Q  RSKLR +QIGSGDRS
Sbjct: 269  RITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQKDRSKLRMEQIGSGDRS 328

Query: 1250 ERIRTYNFPQGRVTDHRVGITNHSIEDVMQGENLDTFIEALLMQQEMDAIAS 1405
            ERIRTYNFPQGRVTDHRVGIT+HS+ DVMQGENLD FI+ALL+QQEMDAIAS
Sbjct: 329  ERIRTYNFPQGRVTDHRVGITHHSVNDVMQGENLDVFIDALLLQQEMDAIAS 380



 Score =  252 bits (643), Expect(2) = e-151
 Identities = 129/208 (62%), Positives = 158/208 (75%)
 Frame = +1

Query: 205 FNLTRLLSTAPDALQPDISIDLIKMMNHKLAAMEHRSAYLRSVMDQSDVAPSEYSRANKE 384
           F+  R  ST    LQP +S DLI +M  +L+A+EHRSAYL+  +++ + +P EY+RANKE
Sbjct: 6   FSFIRPYSTE---LQPQLSTDLIGIMEQRLSAIEHRSAYLQDFINRPEASPVEYARANKE 62

Query: 385 LRKLTPTIDLLNHWRAKQKEIEGLKSVLADCKDDKXXXXXXXXXXXXXXXXXKRMQYTLL 564
           LRKL  +I+ +   R KQKEI+GLKS++A+C +DK                 KR+Q  LL
Sbjct: 63  LRKLRSSIEHITELRNKQKEIDGLKSLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLL 122

Query: 565 SSLLPKDDADERDCILEVRAGTGGEEASLFAMDIFKMYEKYAIKSGWKFEVLEVAESDLK 744
            SLLPKD+ADERDCILEVRAGTGGEEASLFAMDIFKMYEKY+ K+GWKFEV+++ ESDLK
Sbjct: 123 KSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLK 182

Query: 745 GYKEASAAISGASVYGKLKFESGIHRVQ 828
           GYKEAS AISG+ VYGKLKFESGIHRVQ
Sbjct: 183 GYKEASGAISGSGVYGKLKFESGIHRVQ 210


>ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis thaliana]
            gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis
            thaliana] gi|330255695|gb|AEC10789.1| Peptide chain
            release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  307 bits (787), Expect(2) = e-149
 Identities = 150/175 (85%), Positives = 170/175 (97%)
 Frame = +2

Query: 890  VQRVPVTEKSGRIHTSAVSVAILPQADQVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV 1069
            VQR+P+TEKSGRIHTSA+SVAILPQAD+VDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV
Sbjct: 237  VQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV 296

Query: 1070 RITHIPSGLIVAIQDERSQHMNKAKALKVLCARLYEIERSRMQASRSKLRSDQIGSGDRS 1249
            RI H+P+G++V+IQDERSQHMN+AKALKVLCARLYEIER R+Q+SRSKLRSDQIGSGDRS
Sbjct: 297  RIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRSDQIGSGDRS 356

Query: 1250 ERIRTYNFPQGRVTDHRVGITNHSIEDVMQGENLDTFIEALLMQQEMDAIASLTA 1414
             RIRTYNFPQGRVTDHRVGIT+H+IED+MQGENLD FI+ALL++QEMDAIAS ++
Sbjct: 357  GRIRTYNFPQGRVTDHRVGITHHAIEDMMQGENLDMFIDALLLRQEMDAIASFSS 411



 Score =  249 bits (637), Expect(2) = e-149
 Identities = 125/207 (60%), Positives = 162/207 (78%)
 Frame = +1

Query: 208 NLTRLLSTAPDALQPDISIDLIKMMNHKLAAMEHRSAYLRSVMDQSDVAPSEYSRANKEL 387
           N+ RL +T    ++P +S DLIK+M+ +L+A+EHR+A L+ +++Q + +P E+SRANKEL
Sbjct: 35  NMIRLYTTG---MEPQLSPDLIKIMDQRLSAIEHRNAVLQKLINQPEYSPEEFSRANKEL 91

Query: 388 RKLTPTIDLLNHWRAKQKEIEGLKSVLADCKDDKXXXXXXXXXXXXXXXXXKRMQYTLLS 567
           RKL  ++ L+N  RAKQKEI+GLKS++++  DDK                 KR+Q  LL 
Sbjct: 92  RKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLK 151

Query: 568 SLLPKDDADERDCILEVRAGTGGEEASLFAMDIFKMYEKYAIKSGWKFEVLEVAESDLKG 747
           SLLPKD+ADERDCILEVRAGTGGEEASLFAMDIF+MYE+Y+ K GWKF+++++ ESD+KG
Sbjct: 152 SLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKG 211

Query: 748 YKEASAAISGASVYGKLKFESGIHRVQ 828
           YKEASAAI GASVYGKLKFESGIHRVQ
Sbjct: 212 YKEASAAICGASVYGKLKFESGIHRVQ 238


>ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
            gi|223545675|gb|EEF47179.1| peptide chain release factor,
            putative [Ricinus communis]
          Length = 422

 Score =  308 bits (788), Expect(2) = e-149
 Identities = 151/174 (86%), Positives = 169/174 (97%)
 Frame = +2

Query: 890  VQRVPVTEKSGRIHTSAVSVAILPQADQVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV 1069
            VQRVPVTEKSGR+HTSAVSVAILPQAD+VDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV
Sbjct: 246  VQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV 305

Query: 1070 RITHIPSGLIVAIQDERSQHMNKAKALKVLCARLYEIERSRMQASRSKLRSDQIGSGDRS 1249
            R+TH+P+G+ V+IQDERSQHMNKAKALKVLCA+LYEIERSR+Q SRSKLRS+QIGSGDRS
Sbjct: 306  RVTHLPTGMTVSIQDERSQHMNKAKALKVLCAKLYEIERSRIQMSRSKLRSEQIGSGDRS 365

Query: 1250 ERIRTYNFPQGRVTDHRVGITNHSIEDVMQGENLDTFIEALLMQQEMDAIASLT 1411
            ERIRTYNFPQGRVTDHRVGIT+H+I ++MQGE+LD FI+ALL+QQEMDAIAS +
Sbjct: 366  ERIRTYNFPQGRVTDHRVGITHHAINNMMQGESLDVFIDALLLQQEMDAIASFS 419



 Score =  248 bits (634), Expect(2) = e-149
 Identities = 126/208 (60%), Positives = 159/208 (76%), Gaps = 1/208 (0%)
 Frame = +1

Query: 208 NLTRLLSTAPDA-LQPDISIDLIKMMNHKLAAMEHRSAYLRSVMDQSDVAPSEYSRANKE 384
           N + L S A    LQ  +S DLI++M  +L+A+EHRSAYL + +D+ + +P+EYSRANKE
Sbjct: 40  NASHLFSRAYSTELQSHLSPDLIRIMEQRLSAIEHRSAYLENFIDKLEASPAEYSRANKE 99

Query: 385 LRKLTPTIDLLNHWRAKQKEIEGLKSVLADCKDDKXXXXXXXXXXXXXXXXXKRMQYTLL 564
           LRKL   ++L++  R+ QKEI+GL+S++A+C +DK                 KR+Q  LL
Sbjct: 100 LRKLRRPVELISELRSIQKEIDGLRSLMAECPEDKHMIDMANEELNQAIEEEKRLQNVLL 159

Query: 565 SSLLPKDDADERDCILEVRAGTGGEEASLFAMDIFKMYEKYAIKSGWKFEVLEVAESDLK 744
            SLLP DDADERDCILEVRAGTGGEEASLF+MDIF+MYE+Y+ K GWKFEV+++ ESDLK
Sbjct: 160 KSLLPTDDADERDCILEVRAGTGGEEASLFSMDIFRMYERYSQKKGWKFEVVDITESDLK 219

Query: 745 GYKEASAAISGASVYGKLKFESGIHRVQ 828
           GYKEASAAISGA V+GKLKFESGIHRVQ
Sbjct: 220 GYKEASAAISGAGVFGKLKFESGIHRVQ 247


>ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
            lyrata] gi|297327940|gb|EFH58360.1| hypothetical protein
            ARALYDRAFT_904175 [Arabidopsis lyrata subsp. lyrata]
          Length = 410

 Score =  303 bits (776), Expect(2) = e-147
 Identities = 149/175 (85%), Positives = 169/175 (96%)
 Frame = +2

Query: 890  VQRVPVTEKSGRIHTSAVSVAILPQADQVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV 1069
            VQR+P+TEKSGRIHTSA+SVAILPQAD+VDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV
Sbjct: 234  VQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV 293

Query: 1070 RITHIPSGLIVAIQDERSQHMNKAKALKVLCARLYEIERSRMQASRSKLRSDQIGSGDRS 1249
            RI H+P+G++V+IQDERSQHMN+AKALKVLCARLYEIER R+Q+SRSKLRSDQIGSGDRS
Sbjct: 294  RIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRSDQIGSGDRS 353

Query: 1250 ERIRTYNFPQGRVTDHRVGITNHSIEDVMQGENLDTFIEALLMQQEMDAIASLTA 1414
             RIRTYNFPQGRVTDHRVGIT H+IED+MQGE LD+FI+ALL++QEMDAIAS ++
Sbjct: 354  GRIRTYNFPQGRVTDHRVGITLHAIEDMMQGEILDSFIDALLLRQEMDAIASFSS 408



 Score =  245 bits (626), Expect(2) = e-147
 Identities = 120/205 (58%), Positives = 159/205 (77%)
 Frame = +1

Query: 214 TRLLSTAPDALQPDISIDLIKMMNHKLAAMEHRSAYLRSVMDQSDVAPSEYSRANKELRK 393
           ++++      ++P +S DLIK+M+ +L+A+EHR+A L+ +++Q + +P E+SRANKELRK
Sbjct: 31  SKMIRLYTTGMEPQLSPDLIKIMDQRLSAIEHRNALLQKLINQPEYSPEEFSRANKELRK 90

Query: 394 LTPTIDLLNHWRAKQKEIEGLKSVLADCKDDKXXXXXXXXXXXXXXXXXKRMQYTLLSSL 573
           L  ++ L+N  RAKQKEI+GLKS++++  DDK                 KR+Q  LL SL
Sbjct: 91  LRDSMFLINDLRAKQKEIDGLKSLVSESSDDKDMLDMAVSELDEAVEEEKRLQTLLLKSL 150

Query: 574 LPKDDADERDCILEVRAGTGGEEASLFAMDIFKMYEKYAIKSGWKFEVLEVAESDLKGYK 753
           LPKD+ADERDCILEVRAGTGGEEASLFAMDIF+MYE+Y+ K  WKF+++++ ESD+KGYK
Sbjct: 151 LPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKAWKFDIVDITESDMKGYK 210

Query: 754 EASAAISGASVYGKLKFESGIHRVQ 828
           EASAAI GASVYGKLKFESGIHRVQ
Sbjct: 211 EASAAICGASVYGKLKFESGIHRVQ 235


>ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 415

 Score =  304 bits (779), Expect(2) = e-144
 Identities = 147/177 (83%), Positives = 170/177 (96%)
 Frame = +2

Query: 890  VQRVPVTEKSGRIHTSAVSVAILPQADQVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV 1069
            VQRVPVTEKSGRIHTSAVSVAILPQAD+VDVQL+NEDLRIDTYRSGGSGGQHANTTNSAV
Sbjct: 239  VQRVPVTEKSGRIHTSAVSVAILPQADEVDVQLKNEDLRIDTYRSGGSGGQHANTTNSAV 298

Query: 1070 RITHIPSGLIVAIQDERSQHMNKAKALKVLCARLYEIERSRMQASRSKLRSDQIGSGDRS 1249
            R+THIP+G+++ IQDERSQHMNKAKALKVLCA+LYE+ER R+++SRSKLR +QIGSGDRS
Sbjct: 299  RVTHIPTGIMITIQDERSQHMNKAKALKVLCAKLYEMERLRLRSSRSKLRLEQIGSGDRS 358

Query: 1250 ERIRTYNFPQGRVTDHRVGITNHSIEDVMQGENLDTFIEALLMQQEMDAIASLTAER 1420
            ERIRTYNFPQGRVTDHRVGIT HS++DVMQGENLD FI+ALL+Q+EMDA+A+ ++ +
Sbjct: 359  ERIRTYNFPQGRVTDHRVGITYHSVDDVMQGENLDVFIDALLLQEEMDAMATFSSSQ 415



 Score =  237 bits (605), Expect(2) = e-144
 Identities = 115/191 (60%), Positives = 152/191 (79%)
 Frame = +1

Query: 256 ISIDLIKMMNHKLAAMEHRSAYLRSVMDQSDVAPSEYSRANKELRKLTPTIDLLNHWRAK 435
           +S +L+ +M  +L+A+E+R++ L + ++Q + +PSEY+RANKELRKL+ ++DL+   RAK
Sbjct: 50  LSPELLNIMEQRLSAIEYRTSCLNNFLNQPEASPSEYARANKELRKLSGSVDLIKELRAK 109

Query: 436 QKEIEGLKSVLADCKDDKXXXXXXXXXXXXXXXXXKRMQYTLLSSLLPKDDADERDCILE 615
           QKEI+GLKS++A+C +DK                 +++Q  LL SLLPKDDADERDCILE
Sbjct: 110 QKEIDGLKSLMAECSEDKDMLNMATEEMGQAVEEERKLQNLLLKSLLPKDDADERDCILE 169

Query: 616 VRAGTGGEEASLFAMDIFKMYEKYAIKSGWKFEVLEVAESDLKGYKEASAAISGASVYGK 795
           VRAGTGGEEASLFAMDIF+MYEKYA++ GWKFEV+++A+SD KGYKEASAAI+G  V+ K
Sbjct: 170 VRAGTGGEEASLFAMDIFRMYEKYALEKGWKFEVVDIAQSDHKGYKEASAAIAGDGVFRK 229

Query: 796 LKFESGIHRVQ 828
           LKFESGIHRVQ
Sbjct: 230 LKFESGIHRVQ 240


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