BLASTX nr result

ID: Lithospermum22_contig00017721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017721
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36838.3| unnamed protein product [Vitis vinifera]              123   2e-26
emb|CBI39513.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|XP_004171725.1| PREDICTED: probable U6 snRNA-associated Sm-l...   119   3e-25
ref|XP_004170111.1| PREDICTED: probable U6 snRNA-associated Sm-l...   119   3e-25
ref|XP_004146419.1| PREDICTED: probable U6 snRNA-associated Sm-l...   119   3e-25

>emb|CBI36838.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/60 (91%), Positives = 57/60 (95%)
 Frame = -1

Query: 181 FSYITKMLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 2
           F  + KMLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW
Sbjct: 41  FCALVKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 100


>emb|CBI39513.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/55 (98%), Positives = 55/55 (100%)
 Frame = -1

Query: 166 KMLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 2
           KMLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW
Sbjct: 13  KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 67


>ref|XP_004171725.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Cucumis sativus]
          Length = 149

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/54 (98%), Positives = 54/54 (100%)
 Frame = -1

Query: 163 MLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 2
           MLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 54


>ref|XP_004170111.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Cucumis sativus]
          Length = 149

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/54 (98%), Positives = 54/54 (100%)
 Frame = -1

Query: 163 MLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 2
           MLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 54


>ref|XP_004146419.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Cucumis sativus]
          Length = 138

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/54 (98%), Positives = 54/54 (100%)
 Frame = -1

Query: 163 MLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 2
           MLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 54


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