BLASTX nr result

ID: Lithospermum22_contig00017714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017714
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96713.1| unknown [Populus trichocarpa x Populus deltoides]      389   e-105
ref|XP_002273946.1| PREDICTED: uncharacterized protein HI_1198 [...   384   e-104
ref|XP_002884252.1| yrdC family protein [Arabidopsis lyrata subs...   380   e-103
ref|XP_002298628.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103
ref|NP_566156.2| putative translation factor [Arabidopsis thalia...   379   e-103

>gb|ABK96713.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 313

 Score =  389 bits (998), Expect = e-105
 Identities = 188/256 (73%), Positives = 217/256 (84%), Gaps = 3/256 (1%)
 Frame = +1

Query: 97  PRGLVTMAVVKRSPKRLKYAAPRLPKEGRLAYIEVDPSGSDAWKLDPVVQLLKEGAVGVI 276
           PR  V    +KRSPKRLKY+APR  KE  L Y+E D  GSD WKL+PV++LLK+GAVGVI
Sbjct: 43  PRLRVLSMAIKRSPKRLKYSAPRFTKEDGLLYVEADELGSDTWKLEPVIELLKQGAVGVI 102

Query: 277 PTDTLYAMVCDLNNNSAIERLRRIKGIEPSKPLSLLCLSFRDIDTYTMGFPRGNDHGFTN 456
           PTDT+YA+VCDL +NSAIERLRRIK IEPSKPLS+LC S RDIDTYT GFPRG+  G  +
Sbjct: 103 PTDTVYAIVCDLKSNSAIERLRRIKNIEPSKPLSILCHSLRDIDTYTTGFPRGDGQGHAD 162

Query: 457 IFRAVKHCLPGPYTFILTASKGLPKQCIRDGTTT---SSRRHVGVRIPDDPVCQAILQKM 627
           IFRAVKHCLPGPYTFILTASK LPKQC+R GTTT   +SR++VG+R+PDD +CQAIL+KM
Sbjct: 163 IFRAVKHCLPGPYTFILTASKELPKQCVRFGTTTAKYASRKNVGIRMPDDAICQAILEKM 222

Query: 628 DAPLISTSVRSPKENDWILDPVAISDIYGPEGLDFVVDAGIRAADPSTVVNMTGSIPLIV 807
           DAPLISTSVRSPKEN+W++DPV I+DIYG EGLDFVV+ GIR ADPSTVV+MTGS P I+
Sbjct: 223 DAPLISTSVRSPKENEWMIDPVVIADIYGLEGLDFVVNGGIRVADPSTVVDMTGSSPKII 282

Query: 808 RQGKGPKQPWMVTEDE 855
           RQGKGPK  WMV ED+
Sbjct: 283 RQGKGPKLHWMVAEDD 298


>ref|XP_002273946.1| PREDICTED: uncharacterized protein HI_1198 [Vitis vinifera]
           gi|296082345|emb|CBI21350.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score =  384 bits (986), Expect = e-104
 Identities = 188/265 (70%), Positives = 217/265 (81%), Gaps = 5/265 (1%)
 Frame = +1

Query: 97  PRGLVTMAVVKRSPKRLKYAAPRLPKEGRLAYIEVDPSGSDAWKLDPVVQLLKEGAVGVI 276
           PR        KRSPKRLKY+APR  KE  L Y+E DPSG+D+WKL+PV  LLKEGAVGVI
Sbjct: 35  PRFRFVALAAKRSPKRLKYSAPRFSKEDGLLYVEADPSGTDSWKLEPVADLLKEGAVGVI 94

Query: 277 PTDTLYAMVCDLNNNSAIERLRRIKGIEPSKPLSLLCLSFRDIDTYTMGFPRGNDHGFTN 456
           PTDT+YA+VC L ++SAIERLRRIK IE SKPLS+LC S RDIDTYT GFP G   G TN
Sbjct: 95  PTDTVYAIVCHLRSHSAIERLRRIKDIEASKPLSILCRSLRDIDTYTTGFPCGIGQGQTN 154

Query: 457 IFRAVKHCLPGPYTFILTASKGLPKQCIRDGTTT---SSRRHVGVRIPDDPVCQAILQKM 627
           IFRAVKHCLPGPYTFILTASK LPKQC R GTTT   +SR++VGVR+PDD +C+AILQ M
Sbjct: 155 IFRAVKHCLPGPYTFILTASKELPKQCTRYGTTTAKYASRKNVGVRMPDDAICKAILQMM 214

Query: 628 DAPLISTSVRSPKENDWILDPVAISDIYGPEGLDFVVDAGIRAADPSTVVNMTGSIPLIV 807
           DAPLI+TSV+SPKEN+W+LDP+ I+D+YGPEGLDFVVD G+R ADPSTVV+MTG  P I+
Sbjct: 215 DAPLIATSVKSPKENEWMLDPITIADVYGPEGLDFVVDGGVRVADPSTVVDMTGRTPKII 274

Query: 808 RQGKGPKQPWMVTEDEP--SANSEN 876
           RQGKGPKQPWMV+E +   + N EN
Sbjct: 275 RQGKGPKQPWMVSESDTDFAINGEN 299


>ref|XP_002884252.1| yrdC family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330092|gb|EFH60511.1| yrdC family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score =  380 bits (975), Expect = e-103
 Identities = 178/254 (70%), Positives = 211/254 (83%), Gaps = 3/254 (1%)
 Frame = +1

Query: 100 RGLVTMAVVKRSPKRLKYAAPRLPKEGRLAYIEVDPSGSDAWKLDPVVQLLKEGAVGVIP 279
           R  +     KRSPKRLKY+ PR  KEG L YIEVDP G+D+WKL PV++LLK+GAVGVIP
Sbjct: 38  RHTIVALAAKRSPKRLKYSTPRFTKEGELVYIEVDPFGADSWKLQPVIELLKQGAVGVIP 97

Query: 280 TDTLYAMVCDLNNNSAIERLRRIKGIEPSKPLSLLCLSFRDIDTYTMGFPRGNDHGFTNI 459
           TDT+YA+VCD  N+SA+ERLRRIK IE SKPLS+LC S RDIDT+TMGFPRG+ HG  N+
Sbjct: 98  TDTVYALVCDCKNHSAVERLRRIKKIESSKPLSILCRSLRDIDTFTMGFPRGDAHGHANV 157

Query: 460 FRAVKHCLPGPYTFILTASKGLPKQCIRDGTTT---SSRRHVGVRIPDDPVCQAILQKMD 630
           FRAVK CLPGPYTFILTASK LPKQC+  GTT+   +SR++VGVRI DDP+CQAIL +MD
Sbjct: 158 FRAVKQCLPGPYTFILTASKELPKQCVGYGTTSVKYASRKYVGVRISDDPLCQAILHEMD 217

Query: 631 APLISTSVRSPKENDWILDPVAISDIYGPEGLDFVVDAGIRAADPSTVVNMTGSIPLIVR 810
           APLISTSV+ PKEN+W++DP AI DIYGPEGLDF+VD G+R A+PST+V+MTG  P ++R
Sbjct: 218 APLISTSVKGPKENEWMIDPTAIGDIYGPEGLDFLVDGGVRVAEPSTIVDMTGPYPKVIR 277

Query: 811 QGKGPKQPWMVTED 852
           QGKGP  PWMV ED
Sbjct: 278 QGKGPILPWMVVED 291


>ref|XP_002298628.1| predicted protein [Populus trichocarpa] gi|222845886|gb|EEE83433.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  379 bits (974), Expect = e-103
 Identities = 187/265 (70%), Positives = 216/265 (81%), Gaps = 12/265 (4%)
 Frame = +1

Query: 97  PRGLVTMAVVKRSPKRLKYAAPRLPKEGRLAYIEVDPSGSDAWKLDPVVQLLKEGAVGVI 276
           PR  V    +KRSPKRLKY+APR  KE  L Y+E D  GSD WKL+PV++LLK+GAVGVI
Sbjct: 43  PRLRVLSMAIKRSPKRLKYSAPRFTKEDGLLYVEADELGSDTWKLEPVIELLKQGAVGVI 102

Query: 277 PTDTLYAMVCDLNNNSAIERLRRIKGIEPSK---------PLSLLCLSFRDIDTYTMGFP 429
           PTDT+YA+VCDL +NSAIERLRRIK IEPSK         PL +LC S RDIDTYT GFP
Sbjct: 103 PTDTVYAIVCDLKSNSAIERLRRIKNIEPSKARNMASLHSPLYILCHSLRDIDTYTTGFP 162

Query: 430 RGNDHGFTNIFRAVKHCLPGPYTFILTASKGLPKQCIRDGTTTS---SRRHVGVRIPDDP 600
           RG+  G  +IFRAVKHCLPGPYTFILTASK LPKQC+R GTTT+   SR++VG+R+PDD 
Sbjct: 163 RGDGQGHADIFRAVKHCLPGPYTFILTASKELPKQCVRYGTTTAKYASRKNVGIRMPDDA 222

Query: 601 VCQAILQKMDAPLISTSVRSPKENDWILDPVAISDIYGPEGLDFVVDAGIRAADPSTVVN 780
           +CQAIL+KMDAPLISTSVRSPKEN+W++DPV I+DIYG EGLDFVV+ GIR ADPSTVV+
Sbjct: 223 ICQAILEKMDAPLISTSVRSPKENEWMIDPVVIADIYGAEGLDFVVNGGIRVADPSTVVD 282

Query: 781 MTGSIPLIVRQGKGPKQPWMVTEDE 855
           MTGS P I+RQGKGPK  WMV ED+
Sbjct: 283 MTGSSPKIIRQGKGPKLHWMVAEDD 307


>ref|NP_566156.2| putative translation factor [Arabidopsis thaliana]
           gi|6091731|gb|AAF03443.1|AC010797_19 hypothetical
           protein [Arabidopsis thaliana]
           gi|19310491|gb|AAL84979.1| At3g1920/F28J7.25
           [Arabidopsis thaliana] gi|23505865|gb|AAN28792.1|
           At3g1920/F28J7.25 [Arabidopsis thaliana]
           gi|332640214|gb|AEE73735.1| putative translation factor
           [Arabidopsis thaliana]
          Length = 307

 Score =  379 bits (973), Expect = e-103
 Identities = 179/261 (68%), Positives = 212/261 (81%), Gaps = 3/261 (1%)
 Frame = +1

Query: 91  VKPRGLVTMAVVKRSPKRLKYAAPRLPKEGRLAYIEVDPSGSDAWKLDPVVQLLKEGAVG 270
           + PR  +     KRSPKRLKY+ PR  KEG L YIEVDP G D+WKL PV+ LLK+GAVG
Sbjct: 37  LSPRRYIVALAAKRSPKRLKYSTPRFTKEGELVYIEVDPCGVDSWKLQPVIDLLKQGAVG 96

Query: 271 VIPTDTLYAMVCDLNNNSAIERLRRIKGIEPSKPLSLLCLSFRDIDTYTMGFPRGNDHGF 450
           VIPTDT+YA+ CD  N+SA+ERLRRIK IE SKPLS+LC S RDIDT+TMGFPRG+ HG 
Sbjct: 97  VIPTDTVYAIACDCKNHSAVERLRRIKKIESSKPLSILCRSLRDIDTFTMGFPRGDGHGH 156

Query: 451 TNIFRAVKHCLPGPYTFILTASKGLPKQCIRDGTTT---SSRRHVGVRIPDDPVCQAILQ 621
            N+FRAVK CLPGPYTFILTASK LPKQC+  GTT+   +SR++VGVRI DD +CQAILQ
Sbjct: 157 ANVFRAVKQCLPGPYTFILTASKELPKQCVGYGTTSVKYASRKNVGVRISDDALCQAILQ 216

Query: 622 KMDAPLISTSVRSPKENDWILDPVAISDIYGPEGLDFVVDAGIRAADPSTVVNMTGSIPL 801
           +MDAPLI TSV+ PKEN+W++DP AI DIYGPEGLDFVVD GIR A+PST+V+MTG  P 
Sbjct: 217 QMDAPLICTSVKGPKENEWMIDPTAIGDIYGPEGLDFVVDGGIRVAEPSTIVDMTGPYPK 276

Query: 802 IVRQGKGPKQPWMVTEDEPSA 864
           ++R+GKGP  PWMV ED+ S+
Sbjct: 277 VIREGKGPILPWMVVEDDESS 297


Top