BLASTX nr result

ID: Lithospermum22_contig00017672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017672
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD42725.1| putative rac protein [Nicotiana tabacum]               92   6e-22
ref|XP_002318640.1| predicted protein [Populus trichocarpa] gi|2...    89   2e-21
ref|XP_004138120.1| PREDICTED: rac-like GTP-binding protein 3-li...    89   1e-20
ref|XP_002322155.1| predicted protein [Populus trichocarpa] gi|2...    87   3e-20
gb|AEQ62558.1| Rac/Rop GTPase 1 [Aquilaria microcarpa]                 91   3e-19

>emb|CAD42725.1| putative rac protein [Nicotiana tabacum]
          Length = 210

 Score = 92.0 bits (227), Expect(2) = 6e-22
 Identities = 44/46 (95%), Positives = 46/46 (100%)
 Frame = +3

Query: 3   PVTTAQGEELRKQIGAAYYIECSSKTQQNVKSVFDAAIKIVIKPPQ 140
           PVTTAQGEELRKQIGAAYYIECSSKTQQNVK+VFDAAIK+VIKPPQ
Sbjct: 139 PVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVIKPPQ 184



 Score = 38.1 bits (87), Expect(2) = 6e-22
 Identities = 18/27 (66%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +2

Query: 218 QKQKEKKDPRQGCFANVFC-RRLVCSK 295
           QKQKEKK  R+GC  NV C R+LVC K
Sbjct: 184 QKQKEKKKQRRGCLMNVMCGRKLVCLK 210


>ref|XP_002318640.1| predicted protein [Populus trichocarpa] gi|222859313|gb|EEE96860.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 88.6 bits (218), Expect(2) = 2e-21
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   PVTTAQGEELRKQIGAAYYIECSSKTQQNVKSVFDAAIKIVIKPPQ 140
           PVTTAQGEELRKQIGAAYY+ECSSKTQQNVK+VFDAAIK+VIKP Q
Sbjct: 139 PVTTAQGEELRKQIGAAYYVECSSKTQQNVKAVFDAAIKVVIKPAQ 184



 Score = 40.0 bits (92), Expect(2) = 2e-21
 Identities = 21/28 (75%), Positives = 22/28 (78%), Gaps = 2/28 (7%)
 Frame = +2

Query: 218 QKQKE-KKDPRQGCFANVFC-RRLVCSK 295
           QKQKE KK PR+GC  NVFC RRLVC K
Sbjct: 184 QKQKERKKKPRRGCLLNVFCGRRLVCLK 211


>ref|XP_004138120.1| PREDICTED: rac-like GTP-binding protein 3-like [Cucumis sativus]
           gi|449526347|ref|XP_004170175.1| PREDICTED: rac-like
           GTP-binding protein 3-like [Cucumis sativus]
          Length = 210

 Score = 89.4 bits (220), Expect(2) = 1e-20
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = +3

Query: 3   PVTTAQGEELRKQIGAAYYIECSSKTQQNVKSVFDAAIKIVIKPPQ 140
           PVTT QGEELRKQIGA YY+ECSSKTQQNVKSVFDAAIK+VIKPPQ
Sbjct: 139 PVTTLQGEELRKQIGATYYVECSSKTQQNVKSVFDAAIKVVIKPPQ 184



 Score = 36.6 bits (83), Expect(2) = 1e-20
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +2

Query: 218 QKQKEKKDPRQGCFANVFCRR 280
           QKQKEKK P +GC  NVFC R
Sbjct: 184 QKQKEKKRPHRGCLLNVFCGR 204


>ref|XP_002322155.1| predicted protein [Populus trichocarpa] gi|222869151|gb|EEF06282.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 86.7 bits (213), Expect(2) = 3e-20
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = +3

Query: 3   PVTTAQGEELRKQIGAAYYIECSSKTQQNVKSVFDAAIKIVIKPPQ 140
           PVT AQGEELRKQIGAAYYIECSSKTQQNVK+VFDAAIK+VIKP Q
Sbjct: 139 PVTMAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVIKPAQ 184



 Score = 37.7 bits (86), Expect(2) = 3e-20
 Identities = 19/26 (73%), Positives = 21/26 (80%), Gaps = 2/26 (7%)
 Frame = +2

Query: 218 QKQKE-KKDPRQGCFANVFC-RRLVC 289
           QKQKE KK PR+GC  NVFC RRL+C
Sbjct: 184 QKQKERKKKPRRGCLLNVFCGRRLLC 209


>gb|AEQ62558.1| Rac/Rop GTPase 1 [Aquilaria microcarpa]
          Length = 210

 Score = 90.9 bits (224), Expect(2) = 3e-19
 Identities = 43/46 (93%), Positives = 46/46 (100%)
 Frame = +3

Query: 3   PVTTAQGEELRKQIGAAYYIECSSKTQQNVKSVFDAAIKIVIKPPQ 140
           PVTTAQGEELRKQIGAAYYIECSSKTQQNVK+VFDAAI++VIKPPQ
Sbjct: 139 PVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIRVVIKPPQ 184



 Score = 30.0 bits (66), Expect(2) = 3e-19
 Identities = 14/22 (63%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = +2

Query: 218 QKQKEKKDPR-QGCFANVFCRR 280
           QKQKEKK  + +GC  NVFC R
Sbjct: 184 QKQKEKKQKQNRGCLINVFCGR 205


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