BLASTX nr result

ID: Lithospermum22_contig00017667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017667
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303109.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-25
gb|ABK95843.1| unknown [Populus trichocarpa]                           73   4e-25
ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycin...    72   1e-24
ref|XP_002526538.1| Photosystem II reaction center W protein, pu...    71   1e-24
ref|XP_004157580.1| PREDICTED: photosystem II reaction center PS...    73   2e-24

>ref|XP_002303109.1| predicted protein [Populus trichocarpa] gi|222844835|gb|EEE82382.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 73.2 bits (178), Expect(2) = 2e-25
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -1

Query: 503 DEQTIPDVKLTK*RDGSNGMAIFKFDQPSVFDSSTEVGDI 384
           DEQT+PDV+LTK RDG+NGMAIF FDQPSVFDSS EVGDI
Sbjct: 14  DEQTVPDVRLTKSRDGTNGMAIFTFDQPSVFDSSAEVGDI 53



 Score = 67.8 bits (164), Expect(2) = 2e-25
 Identities = 34/52 (65%), Positives = 37/52 (71%), Gaps = 12/52 (23%)
 Frame = -3

Query: 384 YMIDEEGVLQS*------------RIEAKYVMRTPPDWDRFMRFMERYGNAN 265
           YMIDEEG+LQS             RIEAKY+MRTP +WDRFMRFMERY NAN
Sbjct: 57  YMIDEEGILQSVDVNAKFVNGKPERIEAKYIMRTPREWDRFMRFMERYANAN 108


>gb|ABK95843.1| unknown [Populus trichocarpa]
          Length = 181

 Score = 73.2 bits (178), Expect(2) = 4e-25
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -1

Query: 503 DEQTIPDVKLTK*RDGSNGMAIFKFDQPSVFDSSTEVGDI 384
           DEQT+PDV+LTK RDG+NGMAIF FDQPSVFDSS EVGDI
Sbjct: 80  DEQTVPDVRLTKSRDGTNGMAIFTFDQPSVFDSSAEVGDI 119



 Score = 66.6 bits (161), Expect(2) = 4e-25
 Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 12/52 (23%)
 Frame = -3

Query: 384 YMIDEEGVLQS*------------RIEAKYVMRTPPDWDRFMRFMERYGNAN 265
           YMIDEEG+LQS             RIEAKY+MRTP +WDRFMRFME+Y NAN
Sbjct: 123 YMIDEEGILQSVDVNAKFVNGKPERIEAKYIMRTPREWDRFMRFMEKYANAN 174


>ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycine max]
           gi|255628701|gb|ACU14695.1| unknown [Glycine max]
          Length = 179

 Score = 72.4 bits (176), Expect(2) = 1e-24
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -1

Query: 503 DEQTIPDVKLTK*RDGSNGMAIFKFDQPSVFDSSTEVGDI 384
           DEQTIPDV+LTK RDG+NGMAIF FDQPSVFDSS E+GDI
Sbjct: 78  DEQTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEIGDI 117



 Score = 65.9 bits (159), Expect(2) = 1e-24
 Identities = 35/52 (67%), Positives = 36/52 (69%), Gaps = 12/52 (23%)
 Frame = -3

Query: 384 YMIDEEGVLQS*R------------IEAKYVMRTPPDWDRFMRFMERYGNAN 265
           YMIDEEGVLQS              IEAKYVMR+P DWDRFMRFMERY NAN
Sbjct: 121 YMIDEEGVLQSVDVSAKFVNGKPSIIEAKYVMRSPRDWDRFMRFMERYSNAN 172


>ref|XP_002526538.1| Photosystem II reaction center W protein, putative [Ricinus
           communis] gi|223534099|gb|EEF35816.1| Photosystem II
           reaction center W protein, putative [Ricinus communis]
          Length = 178

 Score = 71.2 bits (173), Expect(2) = 1e-24
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = -1

Query: 503 DEQTIPDVKLTK*RDGSNGMAIFKFDQPSVFDSSTEVGDI 384
           DEQTIPDV+LTK RDG+NGMAIF FD+PSVFDSS E+GDI
Sbjct: 77  DEQTIPDVRLTKSRDGTNGMAIFTFDEPSVFDSSAELGDI 116



 Score = 67.0 bits (162), Expect(2) = 1e-24
 Identities = 35/52 (67%), Positives = 37/52 (71%), Gaps = 12/52 (23%)
 Frame = -3

Query: 384 YMIDEEGVLQS*------------RIEAKYVMRTPPDWDRFMRFMERYGNAN 265
           YMIDEEGVLQS             RIEAKYVMR+P +WDRFMRFMERY NAN
Sbjct: 120 YMIDEEGVLQSVDVSAKFVNGKPARIEAKYVMRSPREWDRFMRFMERYANAN 171


>ref|XP_004157580.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Cucumis sativus]
          Length = 226

 Score = 73.2 bits (178), Expect(2) = 2e-24
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = -1

Query: 503 DEQTIPDVKLTK*RDGSNGMAIFKFDQPSVFDSSTEVGDI 384
           DEQTIPDV+LTK RDG+NGMAIF+F+QPSVFDSS EVGDI
Sbjct: 125 DEQTIPDVRLTKSRDGTNGMAIFRFEQPSVFDSSAEVGDI 164



 Score = 63.9 bits (154), Expect(2) = 2e-24
 Identities = 33/52 (63%), Positives = 36/52 (69%), Gaps = 12/52 (23%)
 Frame = -3

Query: 384 YMIDEEGVLQS*R------------IEAKYVMRTPPDWDRFMRFMERYGNAN 265
           YMIDEEG++QS              IEAKYVMRTP +WDRFMRFMERY NAN
Sbjct: 168 YMIDEEGMIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNAN 219


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