BLASTX nr result

ID: Lithospermum22_contig00017661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017661
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40540.1| kelch repeat-containing F-box family protein, put...   238   5e-61
ref|XP_002534442.1| conserved hypothetical protein [Ricinus comm...   231   4e-59
emb|CBI31984.3| unnamed protein product [Vitis vinifera]              231   5e-59
ref|XP_003631294.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   231   5e-59
emb|CBI15248.3| unnamed protein product [Vitis vinifera]              229   1e-58

>gb|AAT40540.1| kelch repeat-containing F-box family protein, putative [Solanum
           demissum]
          Length = 513

 Score =  238 bits (606), Expect = 5e-61
 Identities = 111/134 (82%), Positives = 122/134 (91%)
 Frame = -1

Query: 404 IGRDNSISCVIRCSRSDYGAVASLNKSFHELITSGEVYRLRRQYGVVEHWVYFSCQLLEW 225
           IGRDNS+S +IR SRSDYG VASLN  F  L+ SGE+YRLRRQ GVVEHWVYFSCQLLEW
Sbjct: 169 IGRDNSVSSLIRVSRSDYGNVASLNSEFRSLVRSGELYRLRRQMGVVEHWVYFSCQLLEW 228

Query: 224 ESFDPIRRRWMHLPTMNPNECFQFSDKESLAVGTELLVFGKEVMSNVIYKYSLLTNSWSS 45
           E FDP RRRWMHLPTMNPNECF FSDKESLAVGTELLVFGKEV+++VIY+YSLLTN+W+S
Sbjct: 229 EVFDPSRRRWMHLPTMNPNECFVFSDKESLAVGTELLVFGKEVLAHVIYRYSLLTNTWTS 288

Query: 44  GMRMNAPRCLFGSA 3
           GM+MNAPRCLFGSA
Sbjct: 289 GMQMNAPRCLFGSA 302


>ref|XP_002534442.1| conserved hypothetical protein [Ricinus communis]
           gi|223525283|gb|EEF27941.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 422

 Score =  231 bits (590), Expect = 4e-59
 Identities = 107/134 (79%), Positives = 120/134 (89%)
 Frame = -1

Query: 404 IGRDNSISCVIRCSRSDYGAVASLNKSFHELITSGEVYRLRRQYGVVEHWVYFSCQLLEW 225
           IGRD SI+C+IRCSRSDYG++ASLNKSF  LI SGE+Y+LRRQ GV EHWVYFSC LLEW
Sbjct: 79  IGRDMSINCLIRCSRSDYGSIASLNKSFRSLIRSGELYKLRRQKGVTEHWVYFSCHLLEW 138

Query: 224 ESFDPIRRRWMHLPTMNPNECFQFSDKESLAVGTELLVFGKEVMSNVIYKYSLLTNSWSS 45
           E+FDP+ RRWMHLP M  N+CF  SDKESLAVGTELLVFGKEVMS+VIY+YS+LTNSWS+
Sbjct: 139 EAFDPVLRRWMHLPRMPSNDCFMCSDKESLAVGTELLVFGKEVMSHVIYRYSILTNSWST 198

Query: 44  GMRMNAPRCLFGSA 3
           GM MNAPRCLFGSA
Sbjct: 199 GMAMNAPRCLFGSA 212


>emb|CBI31984.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  231 bits (589), Expect = 5e-59
 Identities = 108/134 (80%), Positives = 120/134 (89%)
 Frame = -1

Query: 404 IGRDNSISCVIRCSRSDYGAVASLNKSFHELITSGEVYRLRRQYGVVEHWVYFSCQLLEW 225
           IGRD SISC+IRCSRSDYG +ASLN+SF  +I SGE+YR RR+ GV+EHW+YFSCQLLEW
Sbjct: 108 IGRDLSISCLIRCSRSDYGFIASLNRSFRSIIRSGELYRERRKNGVIEHWIYFSCQLLEW 167

Query: 224 ESFDPIRRRWMHLPTMNPNECFQFSDKESLAVGTELLVFGKEVMSNVIYKYSLLTNSWSS 45
           E+FDPIR RWM LPTM  NECF  SDKESLAVGTELLVFGKEVMS+VIY+YS+LTNSWSS
Sbjct: 168 EAFDPIRHRWMRLPTMTFNECFMCSDKESLAVGTELLVFGKEVMSHVIYRYSILTNSWSS 227

Query: 44  GMRMNAPRCLFGSA 3
           GM MNAPRCLFGSA
Sbjct: 228 GMSMNAPRCLFGSA 241


>ref|XP_003631294.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Vitis vinifera]
          Length = 541

 Score =  231 bits (589), Expect = 5e-59
 Identities = 108/134 (80%), Positives = 120/134 (89%)
 Frame = -1

Query: 404 IGRDNSISCVIRCSRSDYGAVASLNKSFHELITSGEVYRLRRQYGVVEHWVYFSCQLLEW 225
           IGRD SISC+IRCSRSDYG +ASLN+SF  +I SGE+YR RR+ GV+EHW+YFSCQLLEW
Sbjct: 197 IGRDLSISCLIRCSRSDYGFIASLNRSFRSIIRSGELYRERRKNGVIEHWIYFSCQLLEW 256

Query: 224 ESFDPIRRRWMHLPTMNPNECFQFSDKESLAVGTELLVFGKEVMSNVIYKYSLLTNSWSS 45
           E+FDPIR RWM LPTM  NECF  SDKESLAVGTELLVFGKEVMS+VIY+YS+LTNSWSS
Sbjct: 257 EAFDPIRHRWMRLPTMTFNECFMCSDKESLAVGTELLVFGKEVMSHVIYRYSILTNSWSS 316

Query: 44  GMRMNAPRCLFGSA 3
           GM MNAPRCLFGSA
Sbjct: 317 GMSMNAPRCLFGSA 330


>emb|CBI15248.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  229 bits (585), Expect = 1e-58
 Identities = 104/134 (77%), Positives = 120/134 (89%)
 Frame = -1

Query: 404 IGRDNSISCVIRCSRSDYGAVASLNKSFHELITSGEVYRLRRQYGVVEHWVYFSCQLLEW 225
           IGRDNSI+C+++CSRSDYG++ASLN+SF  LI  GE+YRLRR+ G+VEHWVYFSC LL+W
Sbjct: 146 IGRDNSINCLLQCSRSDYGSIASLNRSFRSLIRGGELYRLRRKLGIVEHWVYFSCDLLQW 205

Query: 224 ESFDPIRRRWMHLPTMNPNECFQFSDKESLAVGTELLVFGKEVMSNVIYKYSLLTNSWSS 45
           E+FDPIRRRWMHLP M   ECF  SDKESLAVGTELLVFGKEV S+V+YKYS+LTNSWSS
Sbjct: 206 EAFDPIRRRWMHLPRMPSYECFMCSDKESLAVGTELLVFGKEVTSHVVYKYSILTNSWSS 265

Query: 44  GMRMNAPRCLFGSA 3
           GM MN+PRCLFGSA
Sbjct: 266 GMNMNSPRCLFGSA 279


Top