BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017655
         (2683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...   725   0.0  
emb|CBI24516.3| unnamed protein product [Vitis vinifera]              694   0.0  
ref|XP_002866485.1| pentatricopeptide repeat-containing protein ...   518   e-144
ref|NP_201043.1| pentatricopeptide repeat-containing protein [Ar...   510   e-142
gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sati...   414   e-113

>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
            [Vitis vinifera]
          Length = 1101

 Score =  725 bits (1871), Expect = 0.0
 Identities = 364/740 (49%), Positives = 504/740 (68%), Gaps = 1/740 (0%)
 Frame = +2

Query: 290  LLDSLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNALLRGYCKIRNLDMAMSVFVKM 469
            L  +L    C+  +++ A L    +        K    +L+ GYC+ + +  AM VF++M
Sbjct: 236  LYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRM 295

Query: 470  IKLNCEPDNFTYNTLIQGFVKLGLYDKAWLVFRHMAESGLVPNAITYQLMINQYCIDGKV 649
            +K+ C+PD +TYNTLI GFVKLGL+DK W++   M+E GL PN +TY +MI +YC +GKV
Sbjct: 296  LKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKV 355

Query: 650  DCALALMSSMSQCNVAPAVHSYTTLMNALYKENRIEEADRLYMEMVDGGFVPDHVLYFTL 829
            DCAL L+SSMS  N+ P+VHSYT L+ ALYKENR+ E + LY +M+D G VPDHVL+FTL
Sbjct: 356  DCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTL 415

Query: 830  IKNHQPGCEINLALQLVQAISANGCGIDLSASVNPMLSESAEDIMLEIQRLLIEICRRNM 1009
            ++    G E++LAL+++QAI+ NGC +DL            +D+  EI+ LL EI RRN 
Sbjct: 416  MQKQPKGHELHLALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNF 475

Query: 1010 GLANNAFSIYLMALCTAKKLDKALICLDKMVRFGLQPLLSAYNALIKCLLQEGLVGEITS 1189
             LA+ AF I++ ALC A K D AL+ +DKMV  G +PLLS YN+LIKCL QE LV +  S
Sbjct: 476  ALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKS 535

Query: 1190 VVEVMEYDGLLPSPTTFLIIINEHCKRGRVQSAFNILHHMEQRGLKPSVGIYDAIIRCLS 1369
            ++++M+ +G++P   T+LI+++EHC  G + SAF +L  M +RGLKPSV IYD+II CLS
Sbjct: 536  LIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLS 595

Query: 1370 SENSINEAEKLFDRMLESSIDLDESIFVTMINAYCKDGRAIQACELFDKIVHFGLQRSSR 1549
                I EAE +F  MLE+ +D D  I+VTMI+ Y K+ RAI+A +LFDK++  G Q SS 
Sbjct: 596  RRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSH 655

Query: 1550 SYTSLISGLVKINKIERSCWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRFAFSLVDLM 1729
            SYT++ISGLVK N I++ C YL+ M  DGF P+TV+YTSLI+QF+R G++ FAF LVDLM
Sbjct: 656  SYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLM 715

Query: 1730 EKNQIKRDMITYITLVSGLSRNIRSFDDPWY-VEQNKSKEMETMFYQLHHRYMLPNTRKM 1906
            ++NQI+ DMIT I LVSG+SRNI      WY V+   ++  E + + LH  +++P    +
Sbjct: 716  DRNQIECDMITCIALVSGVSRNITPVRRRWYHVKSGSARVREILLHLLHQSFVIPRENNL 775

Query: 1907 ELSFSSKDEMKLFAMQFIKKIQKSVPVHNLYLFNGVISVICCAGRMQEAYNYFHQMLRKG 2086
                 S  ++K FA+  ++KI+ S  + NLYL+NG+IS  C A  +Q+AYN+F  M  +G
Sbjct: 776  SFPRGSPRKIKYFALNLMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEG 835

Query: 2087 LCPNKVTFTFLIDGHLGSGETDLAIRLFNQMNASGCSPDRSLFNTLIRGFCKAERLIDAL 2266
            +CPN+VTFT LI+GH   GE D AI LFN+MNA G +PD   +N LI+G CKA RL+DAL
Sbjct: 836  VCPNQVTFTILINGHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDAL 895

Query: 2267 SVMNAMHKRGFSPCKSSYENLLNCFCARHLSIYALRICEEMVARDYFPRRYNLKQLVTIL 2446
            SV + MHKRG  P KSSYE LL C CA HL ++A +I EEM++ DY P  YN   L+ IL
Sbjct: 896  SVSHTMHKRGLFPNKSSYEKLLKCLCASHLGVHAFKIFEEMLSHDYVPCWYNCNWLLCIL 955

Query: 2447 RQHNKVPEARALHGLLMKKR 2506
             + ++  EA  +  +++K+R
Sbjct: 956  CEEHRWHEAHIVFDVMLKQR 975



 Score =  208 bits (530), Expect(2) = 7e-61
 Identities = 171/674 (25%), Positives = 294/674 (43%), Gaps = 5/674 (0%)
 Frame = +2

Query: 227  AETLFKDYILSRGIEFEVDFDLLDSLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNA 406
            AE +++DY+++RGI    D + L+S+V+CYC LGKL+ A  HFDR+FE+   P K ACNA
Sbjct: 111  AEAVYRDYVIARGII--PDSETLNSMVICYCNLGKLEEAMAHFDRLFEVDSFPCKPACNA 168

Query: 407  LLRGYCKIRNLDMAMSVFVKMIKLNCEPDNFTYNTLIQGFVKLGLYDKAWLVFRHMAESG 586
            +LR  C    +  A   FV++  +      + +N LI G                     
Sbjct: 169  MLRELCARERVLEAFDYFVRINDVGILMGLWCFNRLIDGL-------------------- 208

Query: 587  LVPNAITYQLMINQYCIDGKVDCALALMSSMSQCNVAPA-VHSYTTLMNALYKENRIEEA 763
                           C  G VD A  +  +M +    PA +H Y TL   L ++ R+EEA
Sbjct: 209  ---------------CDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEA 253

Query: 764  DRLYMEMVDGGFVPDHVLYFTLIKNHQPGCEINLALQLVQAISANGCGIDLSASVNPMLS 943
            +    EM   G   D ++Y +LI  +  G ++  A+++   +   GC  D + + N ++ 
Sbjct: 254  ELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPD-TYTYNTLIH 312

Query: 944  ESAEDIMLEIQRLLIEICRRNMGLANNAFSIYLM--ALCTAKKLDKALICLDKMVRFGLQ 1117
               + + L  +  ++       GL  N  + ++M    C   K+D AL  L  M  F L 
Sbjct: 313  GFVK-LGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLT 371

Query: 1118 PLLSAYNALIKCLLQEGLVGEITSVVEVMEYDGLLPSPTTFLIIINEHCKRGRVQSAFNI 1297
            P + +Y  LI  L +E  + E+  + + M   G++P    F  ++ +  K   +  A  I
Sbjct: 372  PSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKI 431

Query: 1298 LHHMEQRGLKPSVGIYDAIIRCLSSENSINEAEKLFDRMLESSIDLDESIFVTMINAYCK 1477
            L  + + G    + +         +++   E E L   ++  +  L +  F   I+A C 
Sbjct: 432  LQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALCA 491

Query: 1478 DGRAIQACELFDKIVHFGLQRSSRSYTSLISGLVKINKIERSCWYLNRMFDDGFEPDTVI 1657
             G+   A    DK+V  G +    +Y SLI  L +   +E +   ++ M ++G  PD   
Sbjct: 492  AGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLAT 551

Query: 1658 YTSLISQFVRNGQIRFAFSLVDLMEKNQIKRDMITYITLVSGLSRNIRSFDDPWYVEQNK 1837
            Y  ++ +   +G +  AF L+D M +  +K  +  Y +++  LSR  R            
Sbjct: 552  YLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRIL---------- 601

Query: 1838 SKEMETMFYQLHHRYMLPNT--RKMELSFSSKDEMKLFAMQFIKKIQKSVPVHNLYLFNG 2011
              E E +F  +    + P+       +S  SK+   + A Q   K+ +     + + +  
Sbjct: 602  --EAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTA 659

Query: 2012 VISVICCAGRMQEAYNYFHQMLRKGLCPNKVTFTFLIDGHLGSGETDLAIRLFNQMNASG 2191
            VIS +     + +  +Y   ML+ G  PN V +T LI+  L  GE + A RL + M+ + 
Sbjct: 660  VISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQ 719

Query: 2192 CSPDRSLFNTLIRG 2233
               D      L+ G
Sbjct: 720  IECDMITCIALVSG 733



 Score = 54.7 bits (130), Expect(2) = 7e-61
 Identities = 30/71 (42%), Positives = 38/71 (53%)
 Frame = +3

Query: 6   EYHKVRIFTSTDHLISRGLLYLAXXXXXXXXXXXXXXXEALYAVEFGFSRGLELDSCCLS 185
           E+H    FT TD LI RG+L L                +A+ AVEF  +RGLELDSC   
Sbjct: 37  EHHNKLCFTLTDRLIRRGVLSLGQQVVRRMIKQSPSVSDAILAVEFAAARGLELDSCGYG 96

Query: 186 FLIQKIVSFGE 218
            L++K+V  GE
Sbjct: 97  VLLRKLVGSGE 107



 Score =  123 bits (308), Expect = 3e-25
 Identities = 103/492 (20%), Positives = 220/492 (44%), Gaps = 5/492 (1%)
 Frame = +2

Query: 1040 LMALCTAKKLDKALICLDKMVRFGLQPLLSAYNALIKCLLQEGLVGEITSVVEVMEYDGL 1219
            ++  C   KL++A+   D++      P   A NA+++ L     V E       +   G+
Sbjct: 135  VICYCNLGKLEEAMAHFDRLFEVDSFPCKPACNAMLRELCARERVLEAFDYFVRINDVGI 194

Query: 1220 LPSPTTFLIIINEHCKRGRVQSAFNILHHMEQR-GLKPSVGIYDAIIRCLSSENSINEAE 1396
            L     F  +I+  C +G V  AF +   M +R GL  ++ +Y  +   L  +  + EAE
Sbjct: 195  LMGLWCFNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAE 254

Query: 1397 KLFDRMLESSIDLDESIFVTMINAYCKDGRAIQACELFDKIVHFGLQRSSRSYTSLISGL 1576
                 M      +D+ ++ ++I+ YC+  +   A  +F +++  G    + +Y +LI G 
Sbjct: 255  LFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGF 314

Query: 1577 VKINKIERSCWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRFAFSLVDLMEKNQIKRDM 1756
            VK+   ++     N+M + G +P+ V Y  +I ++   G++  A +L+  M    +   +
Sbjct: 315  VKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSV 374

Query: 1757 ITYITLVSGLSRNIRSFDDPWYVEQNKSKEMETMFYQLHHRYMLPNTRKMELSFSSKD-- 1930
             +Y  L++ L             ++N+  E+E ++ ++    ++P+   +  +   K   
Sbjct: 375  HSYTVLITAL------------YKENRLVEVEELYKKMLDIGVVPD-HVLFFTLMQKQPK 421

Query: 1931 --EMKLFAMQFIKKIQKSVPVHNLYLFNGVISVICCAGRMQEAYNYFHQMLRKGLCPNKV 2104
              E+ L A++ ++ I K+    +L L +   +        QE      +++R+      V
Sbjct: 422  GHELHL-ALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADV 480

Query: 2105 TFTFLIDGHLGSGETDLAIRLFNQMNASGCSPDRSLFNTLIRGFCKAERLIDALSVMNAM 2284
             F   I     +G+TD A+   ++M + GC P  S +N+LI+   +   + DA S+++ M
Sbjct: 481  AFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLM 540

Query: 2285 HKRGFSPCKSSYENLLNCFCARHLSIYALRICEEMVARDYFPRRYNLKQLVTILRQHNKV 2464
             + G  P  ++Y  +++  C       A  + ++M  R   P       ++  L +  ++
Sbjct: 541  QENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRI 600

Query: 2465 PEARALHGLLMK 2500
             EA  +  ++++
Sbjct: 601  LEAENVFKMMLE 612



 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 100/413 (24%), Positives = 172/413 (41%), Gaps = 14/413 (3%)
 Frame = +2

Query: 245  DYILSRGIEFEVDFDLLDSLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNALLRGYC 424
            D +  RG++  V   + DS++ C  +  ++  A   F  + E  + P       ++ GY 
Sbjct: 573  DQMNERGLKPSVA--IYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYS 630

Query: 425  KIRNLDMAMSVFVKMIKLNCEPDNFTYNTLIQGFVKLGLYDKAWLVFRHMAESGLVPNAI 604
            K R    A  +F KMI+   +P + +Y  +I G VK  + DK       M + G VPN +
Sbjct: 631  KNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTV 690

Query: 605  TYQLMINQYCIDGKVDCALALMSSMSQCNVAPAVHSYTTLMNALYKENRIEEADRLYMEM 784
             Y  +INQ+   G+++ A  L+  M +  +   + +   L++ + +   I    R +  +
Sbjct: 691  LYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRN--ITPVRRRWYHV 748

Query: 785  VDGGFVPDHVLYFTLIKNHQPGCEINL-------------ALQLVQAISANGCGIDLSAS 925
              G      +L   L ++     E NL             AL L+Q I  +    +L   
Sbjct: 749  KSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMPNLYL- 807

Query: 926  VNPMLSESAEDIMLEIQRLLIEICRRNMGLANNA-FSIYLMALCTAKKLDKALICLDKMV 1102
             N ++S      M++      E+ +      N   F+I +       ++D A+   +KM 
Sbjct: 808  YNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFNKMN 867

Query: 1103 RFGLQPLLSAYNALIKCLLQEGLVGEITSVVEVMEYDGLLPSPTTFLIIINEHCKRGRVQ 1282
              GL P    YNALIK L + G + +  SV   M   GL P+ +++  ++   C      
Sbjct: 868  ADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLCASHLGV 927

Query: 1283 SAFNILHHMEQRGLKPSVGIYDAIIRCLSSENSINEAEKLFDRMLESSIDLDE 1441
             AF I   M      P     + ++  L  E+  +EA  +FD ML+     DE
Sbjct: 928  HAFKIFEEMLSHDYVPCWYNCNWLLCILCEEHRWHEAHIVFDVMLKQRKYPDE 980



 Score = 69.3 bits (168), Expect = 5e-09
 Identities = 47/192 (24%), Positives = 85/192 (44%)
 Frame = +2

Query: 260  RGIEFEVDFDLLDSLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNALLRGYCKIRNL 439
            +G  F  +  L + ++  +C+   +  A  HF+ +    + P++     L+ G+ +   +
Sbjct: 797  KGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEI 856

Query: 440  DMAMSVFVKMIKLNCEPDNFTYNTLIQGFVKLGLYDKAWLVFRHMAESGLVPNAITYQLM 619
            D A+ +F KM      PD  TYN LI+G  K G    A  V   M + GL PN  +Y+ +
Sbjct: 857  DHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKL 916

Query: 620  INQYCIDGKVDCALALMSSMSQCNVAPAVHSYTTLMNALYKENRIEEADRLYMEMVDGGF 799
            +   C       A  +   M   +  P  ++   L+  L +E+R  EA  ++  M+    
Sbjct: 917  LKCLCASHLGVHAFKIFEEMLSHDYVPCWYNCNWLLCILCEEHRWHEAHIVFDVMLKQRK 976

Query: 800  VPDHVLYFTLIK 835
             PD +    L++
Sbjct: 977  YPDELTKRLLVE 988


>emb|CBI24516.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score =  694 bits (1790), Expect = 0.0
 Identities = 348/693 (50%), Positives = 474/693 (68%), Gaps = 1/693 (0%)
 Frame = +2

Query: 290  LLDSLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNALLRGYCKIRNLDMAMSVFVKM 469
            L  +L    C+  +++ A L    +        K    +L+ GYC+ + +  AM VF++M
Sbjct: 116  LYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRM 175

Query: 470  IKLNCEPDNFTYNTLIQGFVKLGLYDKAWLVFRHMAESGLVPNAITYQLMINQYCIDGKV 649
            +K+ C+PD +TYNTLI GFVKLGL+DK W++   M+E GL PN +TY +MI +YC +GKV
Sbjct: 176  LKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKV 235

Query: 650  DCALALMSSMSQCNVAPAVHSYTTLMNALYKENRIEEADRLYMEMVDGGFVPDHVLYFTL 829
            DCAL L+SSMS  N+ P+VHSYT L+ ALYKENR+ E + LY +M+D G VPDHVL+FTL
Sbjct: 236  DCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTL 295

Query: 830  IKNHQPGCEINLALQLVQAISANGCGIDLSASVNPMLSESAEDIMLEIQRLLIEICRRNM 1009
            ++    G E++LAL+++QAI+ NGC +DL            +D+  EI+ LL EI RRN 
Sbjct: 296  MQKQPKGHELHLALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNF 355

Query: 1010 GLANNAFSIYLMALCTAKKLDKALICLDKMVRFGLQPLLSAYNALIKCLLQEGLVGEITS 1189
             LA+ AF I++ ALC A K D AL+ +DKMV  G +PLLS YN+LIKCL QE LV +  S
Sbjct: 356  ALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKS 415

Query: 1190 VVEVMEYDGLLPSPTTFLIIINEHCKRGRVQSAFNILHHMEQRGLKPSVGIYDAIIRCLS 1369
            ++++M+ +G++P   T+LI+++EHC  G + SAF +L  M +RGLKPSV IYD+II CLS
Sbjct: 416  LIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLS 475

Query: 1370 SENSINEAEKLFDRMLESSIDLDESIFVTMINAYCKDGRAIQACELFDKIVHFGLQRSSR 1549
                I EAE +F  MLE+ +D D  I+VTMI+ Y K+ RAI+A +LFDK++  G Q SS 
Sbjct: 476  RRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSH 535

Query: 1550 SYTSLISGLVKINKIERSCWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRFAFSLVDLM 1729
            SYT++ISGLVK N I++ C YL+ M  DGF P+TV+YTSLI+QF+R G++ FAF LVDLM
Sbjct: 536  SYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLM 595

Query: 1730 EKNQIKRDMITYITLVSGLSRNIRSFDDPWY-VEQNKSKEMETMFYQLHHRYMLPNTRKM 1906
            ++NQI+ DMIT I LVSG+SRNI      WY V+   ++  E + + LH  +++P    +
Sbjct: 596  DRNQIECDMITCIALVSGVSRNITPVRRRWYHVKSGSARVREILLHLLHQSFVIPRENNL 655

Query: 1907 ELSFSSKDEMKLFAMQFIKKIQKSVPVHNLYLFNGVISVICCAGRMQEAYNYFHQMLRKG 2086
                 S  ++K FA+  ++KI+ S  + NLYL+NG+IS  C A  +Q+AYN+F  M  +G
Sbjct: 656  SFPRGSPRKIKYFALNLMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEG 715

Query: 2087 LCPNKVTFTFLIDGHLGSGETDLAIRLFNQMNASGCSPDRSLFNTLIRGFCKAERLIDAL 2266
            +CPN+VTFT LI+GH   GE D AI LFN+MNA G +PD   +N LI+G CKA RL+DAL
Sbjct: 716  VCPNQVTFTILINGHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDAL 775

Query: 2267 SVMNAMHKRGFSPCKSSYENLLNCFCARHLSIY 2365
            SV + MHKRG  P KSSYE LL C CA HL  Y
Sbjct: 776  SVSHTMHKRGLFPNKSSYEKLLKCLCASHLGKY 808



 Score =  153 bits (387), Expect = 2e-34
 Identities = 141/583 (24%), Positives = 252/583 (43%), Gaps = 8/583 (1%)
 Frame = +2

Query: 509  TLIQGFVKLGLYDKAWLVFRHMA-ESGLVPNAITY--QLMINQYCIDGKVDCALALMSSM 679
            TL    ++ G+      V R M  +S  V +AI    + +I+  C  G VD A  +  +M
Sbjct: 45   TLTDRLIRRGVLSLGQQVVRRMIKQSPSVSDAILAVDKRLIDGLCDKGHVDEAFYMFDTM 104

Query: 680  SQCNVAPA-VHSYTTLMNALYKENRIEEADRLYMEMVDGGFVPDHVLYFTLIKNHQPGCE 856
             +    PA +H Y TL   L ++ R+EEA+    EM   G   D ++Y +LI  +  G +
Sbjct: 105  RERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKK 164

Query: 857  INLALQLVQAISANGCGIDLSASVNPMLSESAEDIMLEIQRLLIEICRRNMGLANNAFSI 1036
            +  A+++   +   GC  D + + N ++    + + L  +  ++       GL  N  + 
Sbjct: 165  MRTAMRVFLRMLKMGCDPD-TYTYNTLIHGFVK-LGLFDKGWILHNQMSEWGLQPNVVTY 222

Query: 1037 YLM--ALCTAKKLDKALICLDKMVRFGLQPLLSAYNALIKCLLQEGLVGEITSVVEVMEY 1210
            ++M    C   K+D AL  L  M  F L P + +Y  LI  L +E  + E+  + + M  
Sbjct: 223  HIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLD 282

Query: 1211 DGLLPSPTTFLIIINEHCKRGRVQSAFNILHHMEQRGLKPSVGIYDAIIRCLSSENSINE 1390
             G++P    F  ++ +  K   +  A  IL  + + G    + +         +++   E
Sbjct: 283  IGVVPDHVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQE 342

Query: 1391 AEKLFDRMLESSIDLDESIFVTMINAYCKDGRAIQACELFDKIVHFGLQRSSRSYTSLIS 1570
             E L   ++  +  L +  F   I+A C  G+   A    DK+V  G +    +Y SLI 
Sbjct: 343  IECLLGEIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIK 402

Query: 1571 GLVKINKIERSCWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRFAFSLVDLMEKNQIKR 1750
             L +   +E +   ++ M ++G  PD   Y  ++ +   +G +  AF L+D M +  +K 
Sbjct: 403  CLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKP 462

Query: 1751 DMITYITLVSGLSRNIRSFDDPWYVEQNKSKEMETMFYQLHHRYMLPNT--RKMELSFSS 1924
             +  Y +++  LSR  R              E E +F  +    + P+       +S  S
Sbjct: 463  SVAIYDSIIGCLSRRKRIL------------EAENVFKMMLEAGVDPDAIIYVTMISGYS 510

Query: 1925 KDEMKLFAMQFIKKIQKSVPVHNLYLFNGVISVICCAGRMQEAYNYFHQMLRKGLCPNKV 2104
            K+   + A Q   K+ +     + + +  VIS +     + +  +Y   ML+ G  PN V
Sbjct: 511  KNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTV 570

Query: 2105 TFTFLIDGHLGSGETDLAIRLFNQMNASGCSPDRSLFNTLIRG 2233
             +T LI+  L  GE + A RL + M+ +    D      L+ G
Sbjct: 571  LYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSG 613



 Score =  110 bits (276), Expect = 2e-21
 Identities = 88/423 (20%), Positives = 193/423 (45%), Gaps = 5/423 (1%)
 Frame = +2

Query: 1247 IINEHCKRGRVQSAFNILHHMEQR-GLKPSVGIYDAIIRCLSSENSINEAEKLFDRMLES 1423
            +I+  C +G V  AF +   M +R GL  ++ +Y  +   L  +  + EAE     M   
Sbjct: 84   LIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESE 143

Query: 1424 SIDLDESIFVTMINAYCKDGRAIQACELFDKIVHFGLQRSSRSYTSLISGLVKINKIERS 1603
               +D+ ++ ++I+ YC+  +   A  +F +++  G    + +Y +LI G VK+   ++ 
Sbjct: 144  GHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKG 203

Query: 1604 CWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRFAFSLVDLMEKNQIKRDMITYITLVSG 1783
                N+M + G +P+ V Y  +I ++   G++  A +L+  M    +   + +Y  L++ 
Sbjct: 204  WILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITA 263

Query: 1784 LSRNIRSFDDPWYVEQNKSKEMETMFYQLHHRYMLPNTRKMELSFSSKD----EMKLFAM 1951
            L             ++N+  E+E ++ ++    ++P+   +  +   K     E+ L A+
Sbjct: 264  L------------YKENRLVEVEELYKKMLDIGVVPD-HVLFFTLMQKQPKGHELHL-AL 309

Query: 1952 QFIKKIQKSVPVHNLYLFNGVISVICCAGRMQEAYNYFHQMLRKGLCPNKVTFTFLIDGH 2131
            + ++ I K+    +L L +   +        QE      +++R+      V F   I   
Sbjct: 310  KILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISAL 369

Query: 2132 LGSGETDLAIRLFNQMNASGCSPDRSLFNTLIRGFCKAERLIDALSVMNAMHKRGFSPCK 2311
              +G+TD A+   ++M + GC P  S +N+LI+   +   + DA S+++ M + G  P  
Sbjct: 370  CAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDL 429

Query: 2312 SSYENLLNCFCARHLSIYALRICEEMVARDYFPRRYNLKQLVTILRQHNKVPEARALHGL 2491
            ++Y  +++  C       A  + ++M  R   P       ++  L +  ++ EA  +  +
Sbjct: 430  ATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKM 489

Query: 2492 LMK 2500
            +++
Sbjct: 490  MLE 492



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 34/125 (27%), Positives = 59/125 (47%)
 Frame = +2

Query: 260  RGIEFEVDFDLLDSLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNALLRGYCKIRNL 439
            +G  F  +  L + ++  +C+   +  A  HF+ +    + P++     L+ G+ +   +
Sbjct: 677  KGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEI 736

Query: 440  DMAMSVFVKMIKLNCEPDNFTYNTLIQGFVKLGLYDKAWLVFRHMAESGLVPNAITYQLM 619
            D A+ +F KM      PD  TYN LI+G  K G    A  V   M + GL PN  +Y+ +
Sbjct: 737  DHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKL 796

Query: 620  INQYC 634
            +   C
Sbjct: 797  LKCLC 801


>ref|XP_002866485.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297312320|gb|EFH42744.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 983

 Score =  518 bits (1333), Expect = e-144
 Identities = 283/740 (38%), Positives = 446/740 (60%), Gaps = 2/740 (0%)
 Frame = +2

Query: 287  DLLDSLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNALLRGYCKIRNLDMAMSVFVK 466
            +L  SL  C+C+ G    A   FD +        K     L+R YCK  N+ MAM ++++
Sbjct: 239  NLYKSLFYCFCRRGCAAEAEALFDHMEVDGYFVDKVMYTCLMREYCKDNNMTMAMRLYLR 298

Query: 467  MIKLNCEPDNFTYNTLIQGFVKLGLYDKAWLVFRHMAESGLVPNAITYQLMINQYCIDGK 646
            M++ +CE D   +NTLI GF+KLG+ DK  ++F  M + G+  N  TY +MI  YC +G 
Sbjct: 299  MVERSCELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKRGVQSNVFTYHVMIGSYCKEGN 358

Query: 647  VDCALALMSSMSQC-NVAPAVHSYTTLMNALYKENRIEEADRLYMEMVDGGFVPDHVLYF 823
            VD AL L  + +   +++  VH YTTL++  YK+  +++A  L M M+D G VPDH+ YF
Sbjct: 359  VDYALRLFENNTGVEDISRNVHCYTTLISGFYKKGGMDKAVDLLMRMLDNGIVPDHITYF 418

Query: 824  TLIKNHQPGCEINLALQLVQAISANGCGIDLSASVNPMLSESAEDIMLEIQRLLIEICRR 1003
             L+K      E+  A+ ++Q+I  NGCGID      P + +   +I ++++ LL EI R+
Sbjct: 419  VLLKMLPKCHELKYAMVILQSILDNGCGID------PPVIDDLGNIEVKVESLLEEIARK 472

Query: 1004 NMGLANNAFSIYLMALCTAKKLDKALICLDKMVRFGLQPLLSAYNALIKCLLQEGLVGEI 1183
            +  LA    ++   ALC+ +    AL  ++KMV  G  PL  +YN++IKCL QE ++ ++
Sbjct: 473  DANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDL 532

Query: 1184 TSVVEVMEYDGLLPSPTTFLIIINEHCKRGRVQSAFNILHHMEQRGLKPSVGIYDAIIRC 1363
             S+V +++    +P   T+LI++NE CK     +AF+++  ME+ GL+P+V IY +II  
Sbjct: 533  GSLVNLIQELDFVPDVDTYLIVVNELCKNNDRDAAFSVIDVMEELGLRPTVAIYSSIIGS 592

Query: 1364 LSSENSINEAEKLFDRMLESSIDLDESIFVTMINAYCKDGRAIQACELFDKIVHFGLQRS 1543
            L  +  + EAE+ F +MLES I  DE  ++ MINAY ++GR  +A EL +++V   ++ S
Sbjct: 593  LGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINAYARNGRIDEANELVEEVVKHFVRPS 652

Query: 1544 SRSYTSLISGLVKINKIERSCWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRFAFSLVD 1723
            S +YT LISG VK+  +E+ C YL++M +DG  P+ V+YTSLI  F++ G  +F+F+L  
Sbjct: 653  SFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNAVLYTSLIGHFLKKGDFKFSFTLFG 712

Query: 1724 LMEKNQIKRDMITYITLVSGLSRNI-RSFDDPWYVEQNKSKEMETMFYQLHHRYMLPNTR 1900
            LM +N IK D I YITL+SGL R + R       VE  K K    +  +L     + +  
Sbjct: 713  LMGENGIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEK----LLQRLLQTKPIVSIS 768

Query: 1901 KMELSFSSKDEMKLFAMQFIKKIQKSVPVHNLYLFNGVISVICCAGRMQEAYNYFHQMLR 2080
                ++ SK     FAM+ I K++KS+ + NLYL N +++  C AGR+ EAYN+   M +
Sbjct: 769  SSLCNYGSKS----FAMEVIGKVKKSI-IPNLYLHNTIVTGYCAAGRLDEAYNHLESMQK 823

Query: 2081 KGLCPNKVTFTFLIDGHLGSGETDLAIRLFNQMNASGCSPDRSLFNTLIRGFCKAERLID 2260
            +G+ PN+VT+T L+  H+ +G+ + AI LF +   + C PD+ + +TL++G C++ER +D
Sbjct: 824  EGIVPNQVTYTILMKSHIEAGDIESAIDLFEE---TKCEPDQVMCSTLLKGLCESERPLD 880

Query: 2261 ALSVMNAMHKRGFSPCKSSYENLLNCFCARHLSIYALRICEEMVARDYFPRRYNLKQLVT 2440
            AL++M  M K+G  P K SYE LL C C   L++ A ++ ++M A D +PR  N   L+ 
Sbjct: 881  ALALMLEMQKKGIYPNKDSYEKLLQCLCYSRLTMEAFKVVKDMAALDIWPRSINHTWLIY 940

Query: 2441 ILRQHNKVPEARALHGLLMK 2500
            IL +  K+ EARAL  ++++
Sbjct: 941  ILCEEKKLREARALFAIMVQ 960



 Score =  128 bits (321), Expect = 9e-27
 Identities = 154/700 (22%), Positives = 301/700 (43%), Gaps = 12/700 (1%)
 Frame = +2

Query: 275  EVDFDLLDSLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNALLRGYCKIRNLDMAMS 454
            E+D  + ++L+  + KLG LD  R+ F ++ +  +  +    + ++  YCK  N+D A+ 
Sbjct: 305  ELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKRGVQSNVFTYHVMIGSYCKEGNVDYALR 364

Query: 455  VFVKMIKLNCEPDN-FTYNTLIQGFVKLGLYDKAWLVFRHMAESGLVPNAITYQLMINQY 631
            +F     +     N   Y TLI GF K G  DKA  +   M ++G+VP+ ITY +++   
Sbjct: 365  LFENNTGVEDISRNVHCYTTLISGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKML 424

Query: 632  CIDGKVDCALALMSSM--SQCNVAPAVHSYTTLMNALYK-ENRIEEADRLYMEMVDGGFV 802
                ++  A+ ++ S+  + C + P V     L N   K E+ +EE  R    +   G  
Sbjct: 425  PKCHELKYAMVILQSILDNGCGIDPPV--IDDLGNIEVKVESLLEEIARKDANLAAVGLA 482

Query: 803  PDHVLYFTLIKNHQPGCEINLALQLVQAISANGCGIDLSASVNPMLSESAEDIMLEIQRL 982
               V+   L            AL  ++ +   GC   L  S N ++    ++ ++E    
Sbjct: 483  ---VVTTALCSQR----NYIAALSRIEKMVNLGC-TPLPFSYNSVIKCLFQENIIEDLGS 534

Query: 983  LIEICRRNMGLAN-NAFSIYLMALCTAKKLDKALICLDKMVRFGLQPLLSAYNALIKCLL 1159
            L+ + +    + + + + I +  LC     D A   +D M   GL+P ++ Y+++I  L 
Sbjct: 535  LVNLIQELDFVPDVDTYLIVVNELCKNNDRDAAFSVIDVMEELGLRPTVAIYSSIIGSLG 594

Query: 1160 QEGLVGEITSVVEVMEYDGLLPSPTTFLIIINEHCKRGRVQSAFNILHHMEQRGLKPSVG 1339
            ++G V E       M   G+ P    ++I+IN + + GR+  A  ++  + +  ++PS  
Sbjct: 595  KQGRVVEAEETFAKMLESGIQPDEIAYMIMINAYARNGRIDEANELVEEVVKHFVRPSSF 654

Query: 1340 IYDAIIRCLSSENSINEAEKLFDRMLESSIDLDESIFVTMINAYCKDGRAIQACELFDKI 1519
             Y  +I        + +  +  D+MLE  +  +  ++ ++I  + K G    +  LF  +
Sbjct: 655  TYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNAVLYTSLIGHFLKKGDFKFSFTLFGLM 714

Query: 1520 VHFGLQRSSRSYTSLISGLVKINKIERSCWYLNRMFDDGFEP------DTVIYTSLISQF 1681
               G++    +Y +L+SGL +    ++       + + G E        T    S+ S  
Sbjct: 715  GENGIKHDHIAYITLLSGLWRAMARKKK---RQVIVEPGKEKLLQRLLQTKPIVSISSSL 771

Query: 1682 VRNGQIRFAFSLVDLMEKNQIKRDMITYITLVSGLSRNIRSFDDPWYVEQNKSKEMETMF 1861
               G   FA  ++  ++K+ I  ++  + T+V+G            Y    +  E     
Sbjct: 772  CNYGSKSFAMEVIGKVKKSIIP-NLYLHNTIVTG------------YCAAGRLDEAYNHL 818

Query: 1862 YQLHHRYMLPNTRKMELSFSSKDEMKLFAMQFIKKIQKSVPVHNLYLFNGVISVICCAGR 2041
              +    ++PN     +   S  E        I   +++    +  + + ++  +C + R
Sbjct: 819  ESMQKEGIVPNQVTYTILMKSHIEAGDIE-SAIDLFEETKCEPDQVMCSTLLKGLCESER 877

Query: 2042 MQEAYNYFHQMLRKGLCPNKVTFTFLIDGHLGSGETDLAIRLFNQMNASGCSPDRSLFNT 2221
              +A     +M +KG+ PNK ++  L+     S  T  A ++   M A    P RS+ +T
Sbjct: 878  PLDALALMLEMQKKGIYPNKDSYEKLLQCLCYSRLTMEAFKVVKDMAALDIWP-RSINHT 936

Query: 2222 -LIRGFCKAERLIDALSVMNAMHKRGFSPCKSSYENLLNC 2338
             LI   C+ ++L +A ++   M + G         +LLNC
Sbjct: 937  WLIYILCEEKKLREARALFAIMVQSG--------RSLLNC 968



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 95/506 (18%), Positives = 196/506 (38%), Gaps = 46/506 (9%)
 Frame = +2

Query: 1094 KMVRFGLQPLLSAYNALIKCLLQEGLVGEITSVVEVMEYDGLLPSPTTFLIIINEHCKRG 1273
            +++  G+ P  S  ++++ CL++     E  + ++ +   G  PS  +  ++++E C + 
Sbjct: 122  RVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRDSSSLVVDELCNQD 181

Query: 1274 RVQSAFNILHHMEQRG------------------------------------LKPSVGIY 1345
            R   AF+    +++RG                                    +   V +Y
Sbjct: 182  RFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLDEAIGMLDTLCEMTRMPLPVNLY 241

Query: 1346 DAIIRCLSSENSINEAEKLFDRMLESSIDLDESIFVTMINAYCKDGRAIQACELFDKIVH 1525
             ++  C        EAE LFD M      +D+ ++  ++  YCKD     A  L+ ++V 
Sbjct: 242  KSLFYCFCRRGCAAEAEALFDHMEVDGYFVDKVMYTCLMREYCKDNNMTMAMRLYLRMVE 301

Query: 1526 FGLQRSSRSYTSLISGLVKINKIERSCWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRF 1705
               +     + +LI G +K+  +++     ++M   G + +   Y  +I  + + G + +
Sbjct: 302  RSCELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKRGVQSNVFTYHVMIGSYCKEGNVDY 361

Query: 1706 AFSLVDLMEKN----QIKRDMITYITLVSGLSRNIRSFDDPWYVEQNKSKEMETMFYQLH 1873
            A   + L E N     I R++  Y TL+SG           +Y +    K ++ +   L 
Sbjct: 362  A---LRLFENNTGVEDISRNVHCYTTLISG-----------FYKKGGMDKAVDLLMRMLD 407

Query: 1874 HRYMLPN--TRKMELSFSSKDEMKLFAMQFIKKIQKSVPVHNLYLFNGV---ISVICCAG 2038
            +  ++P+  T  + L    K     +AM  ++ I          L NG      VI   G
Sbjct: 408  NG-IVPDHITYFVLLKMLPKCHELKYAMVILQSI----------LDNGCGIDPPVIDDLG 456

Query: 2039 RMQ-EAYNYFHQMLRKGLCPNKVTFTFLIDGHLGSGETDLAIRLFNQMNASGCSPDRSLF 2215
             ++ +  +   ++ RK      V    +            A+    +M   GC+P    +
Sbjct: 457  NIEVKVESLLEEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSY 516

Query: 2216 NTLIRGFCKAERLIDALSVMNAMHKRGFSPCKSSYENLLNCFCARHLSIYALRICEEMVA 2395
            N++I+   +   + D  S++N + +  F P   +Y  ++N  C  +    A  + + M  
Sbjct: 517  NSVIKCLFQENIIEDLGSLVNLIQELDFVPDVDTYLIVVNELCKNNDRDAAFSVIDVMEE 576

Query: 2396 RDYFPRRYNLKQLVTILRQHNKVPEA 2473
                P       ++  L +  +V EA
Sbjct: 577  LGLRPTVAIYSSIIGSLGKQGRVVEA 602


>ref|NP_201043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75180621|sp|Q9LVA2.1|PP443_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g62370 gi|8809650|dbj|BAA97201.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332010218|gb|AED97601.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 982

 Score =  510 bits (1314), Expect = e-142
 Identities = 282/740 (38%), Positives = 444/740 (60%), Gaps = 2/740 (0%)
 Frame = +2

Query: 287  DLLDSLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNALLRGYCKIRNLDMAMSVFVK 466
            +L  SL  C+CK G    A   FD +        K     L++ YCK  N+ MAM ++++
Sbjct: 238  NLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLR 297

Query: 467  MIKLNCEPDNFTYNTLIQGFVKLGLYDKAWLVFRHMAESGLVPNAITYQLMINQYCIDGK 646
            M++ + E D   +NTLI GF+KLG+ DK  ++F  M + G+  N  TY +MI  YC +G 
Sbjct: 298  MVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357

Query: 647  VDCALAL-MSSMSQCNVAPAVHSYTTLMNALYKENRIEEADRLYMEMVDGGFVPDHVLYF 823
            VD AL L +++    +++  VH YT L+   YK+  +++A  L M M+D G VPDH+ YF
Sbjct: 358  VDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYF 417

Query: 824  TLIKNHQPGCEINLALQLVQAISANGCGIDLSASVNPMLSESAEDIMLEIQRLLIEICRR 1003
             L+K      E+  A+ ++Q+I  NGCGI      NP + +   +I ++++ LL EI R+
Sbjct: 418  VLLKMLPKCHELKYAMVILQSILDNGCGI------NPPVIDDLGNIEVKVESLLGEIARK 471

Query: 1004 NMGLANNAFSIYLMALCTAKKLDKALICLDKMVRFGLQPLLSAYNALIKCLLQEGLVGEI 1183
            +  LA    ++   ALC+ +    AL  ++KMV  G  PL  +YN++IKCL QE ++ ++
Sbjct: 472  DANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDL 531

Query: 1184 TSVVEVMEYDGLLPSPTTFLIIINEHCKRGRVQSAFNILHHMEQRGLKPSVGIYDAIIRC 1363
             S+V +++    +P   T+LI++NE CK+    +AF I+  ME+ GL+P+V IY +II  
Sbjct: 532  ASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGS 591

Query: 1364 LSSENSINEAEKLFDRMLESSIDLDESIFVTMINAYCKDGRAIQACELFDKIVHFGLQRS 1543
            L  +  + EAE+ F +MLES I  DE  ++ MIN Y ++GR  +A EL +++V   L+ S
Sbjct: 592  LGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPS 651

Query: 1544 SRSYTSLISGLVKINKIERSCWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRFAFSLVD 1723
            S +YT LISG VK+  +E+ C YL++M +DG  P+ V+YT+LI  F++ G  +F+F+L  
Sbjct: 652  SFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFG 711

Query: 1724 LMEKNQIKRDMITYITLVSGLSRNI-RSFDDPWYVEQNKSKEMETMFYQLHHRYMLPNTR 1900
            LM +N IK D I YITL+SGL R + R       VE  K K ++ +  +      +P++ 
Sbjct: 712  LMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLI-RTKPLVSIPSSL 770

Query: 1901 KMELSFSSKDEMKLFAMQFIKKIQKSVPVHNLYLFNGVISVICCAGRMQEAYNYFHQMLR 2080
                ++ SK     FAM+ I K++KS+ + NLYL N +I+  C AGR+ EAYN+   M +
Sbjct: 771  G---NYGSKS----FAMEVIGKVKKSI-IPNLYLHNTIITGYCAAGRLDEAYNHLESMQK 822

Query: 2081 KGLCPNKVTFTFLIDGHLGSGETDLAIRLFNQMNASGCSPDRSLFNTLIRGFCKAERLID 2260
            +G+ PN VT+T L+  H+ +G+ + AI LF   N   C PD+ +++TL++G C  +R +D
Sbjct: 823  EGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTN---CEPDQVMYSTLLKGLCDFKRPLD 879

Query: 2261 ALSVMNAMHKRGFSPCKSSYENLLNCFCARHLSIYALRICEEMVARDYFPRRYNLKQLVT 2440
            AL++M  M K G +P K SYE LL C C   L++ A+++ ++M A D +PR  N   L+ 
Sbjct: 880  ALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIY 939

Query: 2441 ILRQHNKVPEARALHGLLMK 2500
            IL +  K+ EARAL  ++++
Sbjct: 940  ILCEEKKLREARALFAIMVQ 959



 Score =  103 bits (257), Expect = 2e-19
 Identities = 99/440 (22%), Positives = 184/440 (41%), Gaps = 50/440 (11%)
 Frame = +2

Query: 362  IFEMRLVPSKEACNALLRGYCKIRNLDMAMSVFVKMIKLNCEPDNFTYNTLIQGFVKLGL 541
            I E+  VP  +    ++   CK  + D A ++   M +L   P    Y+++I    K G 
Sbjct: 538  IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597

Query: 542  YDKAWLVFRHMAESGLVPNAITYQLMINQYCIDGKVDCALALMSSMSQCNVAPAVHSYTT 721
              +A   F  M ESG+ P+ I Y +MIN Y  +G++D A  L+  + +  + P+  +YT 
Sbjct: 598  VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657

Query: 722  LMNALYKENRIEEADRLYMEMVDGGFVP-------------------------------- 805
            L++   K   +E+  +   +M++ G  P                                
Sbjct: 658  LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEND 717

Query: 806  ---DHVLYFTLIKN--------------HQPGCEINLALQLVQAISANGCGIDLSASVNP 934
               DH+ Y TL+                 +PG E     +L+Q +      + + +S+  
Sbjct: 718  IKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE-----KLLQRLIRTKPLVSIPSSLGN 772

Query: 935  MLSES-AEDIMLEIQRLLIEICRRNMGLANNAFSIYLMALCTAKKLDKALICLDKMVRFG 1111
              S+S A +++ ++++ +I     N+ L N   + Y    C A +LD+A   L+ M + G
Sbjct: 773  YGSKSFAMEVIGKVKKSIIP----NLYLHNTIITGY----CAAGRLDEAYNHLESMQKEG 824

Query: 1112 LQPLLSAYNALIKCLLQEGLVGEITSVVEVMEYDGLLPSPTTFLIIINEHCKRGRVQSAF 1291
            + P L  Y  L+K  ++    G+I S +++ E     P    +  ++   C   R   A 
Sbjct: 825  IVPNLVTYTILMKSHIE---AGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDAL 881

Query: 1292 NILHHMEQRGLKPSVGIYDAIIRCLSSENSINEAEKLFDRMLESSIDLDESIFVTMINAY 1471
             ++  M++ G+ P+   Y+ +++CL       EA K+   M    I         +I   
Sbjct: 882  ALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYIL 941

Query: 1472 CKDGRAIQACELFDKIVHFG 1531
            C++ +  +A  LF  +V  G
Sbjct: 942  CEEKKLREARALFAIMVQSG 961



 Score = 78.6 bits (192), Expect = 8e-12
 Identities = 94/503 (18%), Positives = 196/503 (38%), Gaps = 43/503 (8%)
 Frame = +2

Query: 1094 KMVRFGLQPLLSAYNALIKCLLQEGLVGEITSVVEVMEYDGLLPSPTTFLIIINEHCKRG 1273
            +++  G+ P  S  ++++ CL++     E  + ++ +   G  PS  +  ++++E C + 
Sbjct: 121  RVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQD 180

Query: 1274 RVQSAFNILHHMEQRG--------------------LKPSVG----------------IY 1345
            R   AF+    +++RG                    L  ++G                +Y
Sbjct: 181  RFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLY 240

Query: 1346 DAIIRCLSSENSINEAEKLFDRMLESSIDLDESIFVTMINAYCKDGRAIQACELFDKIVH 1525
             ++  C        EAE LFD M      +D+ ++  ++  YCKD     A  L+ ++V 
Sbjct: 241  KSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVE 300

Query: 1526 FGLQRSSRSYTSLISGLVKINKIERSCWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRF 1705
               +     + +LI G +K+  +++     ++M   G + +   Y  +I  + + G + +
Sbjct: 301  RSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDY 360

Query: 1706 AFSL-VDLMEKNQIKRDMITYITLVSGLSRNIRSFDDPWYVEQNKSKEMETMFYQLHHRY 1882
            A  L V+      I R++  Y  L+ G           +Y +    K ++ +   L +  
Sbjct: 361  ALRLFVNNTGSEDISRNVHCYTNLIFG-----------FYKKGGMDKAVDLLMRMLDNG- 408

Query: 1883 MLPN--TRKMELSFSSKDEMKLFAMQFIKKIQKSVPVHNLYLFNGV---ISVICCAGRMQ 2047
            ++P+  T  + L    K     +AM  ++ I          L NG      VI   G ++
Sbjct: 409  IVPDHITYFVLLKMLPKCHELKYAMVILQSI----------LDNGCGINPPVIDDLGNIE 458

Query: 2048 -EAYNYFHQMLRKGLCPNKVTFTFLIDGHLGSGETDLAIRLFNQMNASGCSPDRSLFNTL 2224
             +  +   ++ RK      V    +            A+    +M   GC+P    +N++
Sbjct: 459  VKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSV 518

Query: 2225 IRGFCKAERLIDALSVMNAMHKRGFSPCKSSYENLLNCFCARHLSIYALRICEEMVARDY 2404
            I+   +   + D  S++N + +  F P   +Y  ++N  C ++    A  I + M     
Sbjct: 519  IKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGL 578

Query: 2405 FPRRYNLKQLVTILRQHNKVPEA 2473
             P       ++  L +  +V EA
Sbjct: 579  RPTVAIYSSIIGSLGKQGRVVEA 601


>gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa] gi|31429883|gb|AAP51872.1|
            hypothetical protein LOC_Os10g02650 [Oryza sativa
            Japonica Group]
          Length = 949

 Score =  414 bits (1064), Expect = e-113
 Identities = 236/738 (31%), Positives = 403/738 (54%), Gaps = 2/738 (0%)
 Frame = +2

Query: 299  SLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNALLRGYCKIRNLDMAMSVFVKMI-K 475
            SL   YCK  +   A      +    +   +E   AL+R +C+   L+ A+ VF +M   
Sbjct: 157  SLAFAYCKARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGD 216

Query: 476  LNCEPDNFTYNTLIQGFVKLGLYDKAWLVFRHMAESGLVPNAITYQLMINQYCIDGKVDC 655
             + + D + Y T+I G  + G  D    ++  M + G+ P+A TY +MI  YC    V  
Sbjct: 217  EHVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGA 276

Query: 656  ALALMSSMSQCNVAPAVHSYTTLMNALYKENRIEEADRLYMEMVDGGFVPDHVLYFTLIK 835
            A+ +   M +  VAP +  YT LM +L K+ ++ EA+ L+ +M++ G  PDHV++ ++ +
Sbjct: 277  AMDIYKVMIRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIAR 336

Query: 836  NHQPGCEINLALQLVQAISANGCGIDLSASVNPMLSESAEDIMLEIQRLLIEICRRNMGL 1015
                G  +    + ++A++   CG  L    +     S   +  E   LL EI   N+  
Sbjct: 337  FFPKGWVVLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLP 396

Query: 1016 ANNAFSIYLMALCTAKKLDKALICLDKMVRFGLQPLLSAYNALIKCLLQEGLVGEITSVV 1195
             N   ++ ++A+C+  +LD +   L K+V +G +P +  YN +IKCL ++  + +  +++
Sbjct: 397  VNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALI 456

Query: 1196 EVMEYDGLLPSPTTFLIIINEHCKRGRVQSAFNILHHMEQRGLKPSVGIYDAIIRCLSSE 1375
             +M+  G+ P  +T  I++  +CK G ++SA ++   M + G++PS+ +YD+II CL   
Sbjct: 457  TIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRM 516

Query: 1376 NSINEAEKLFDRMLESSIDLDESIFVTMINAYCKDGRAIQACELFDKIVHFGLQRSSRSY 1555
              + EAE    +M+   +  DE I+ ++IN Y    +    C +FD+++  GLQ    +Y
Sbjct: 517  RRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAY 576

Query: 1556 TSLISGLVKINKIERSCWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRFAFSLVDLMEK 1735
             SLI+GLVK NKI ++  YL RM ++G  P TVIYT LI+QF R G +R    LV LM K
Sbjct: 577  GSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMK 636

Query: 1736 NQIKRDMITYITLVSGLSRNI-RSFDDPWYVEQNKSKEMETMFYQLHHRYMLPNTRKMEL 1912
              +  D+ITY  LV+G+ RNI R    P   +  K KE   M +++  + +     K + 
Sbjct: 637  TNVAPDLITYGALVTGICRNIARRGMRPSLAK--KLKEARYMLFRMLPQIIDTRNGKQKD 694

Query: 1913 SFSSKDEMKLFAMQFIKKIQKSVPVHNLYLFNGVISVICCAGRMQEAYNYFHQMLRKGLC 2092
            +    +EM   A   I+ ++++  V +L+++NG+I+ +C A +M +AY+    M + G+ 
Sbjct: 695  NQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGIL 754

Query: 2093 PNKVTFTFLIDGHLGSGETDLAIRLFNQMNASGCSPDRSLFNTLIRGFCKAERLIDALSV 2272
            PN VT+T L++  +  G+ + AI+LFN +N+ GC  D+  +NT I+G   A R+ +ALS 
Sbjct: 755  PNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSF 814

Query: 2273 MNAMHKRGFSPCKSSYENLLNCFCARHLSIYALRICEEMVARDYFPRRYNLKQLVTILRQ 2452
            +  MHKRGF P K+SY+ L+    A +     L++ E+M+ + Y PR  N   L+ +L +
Sbjct: 815  LLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLLLVLAK 874

Query: 2453 HNKVPEARALHGLLMKKR 2506
              +  EA  +  +++KKR
Sbjct: 875  DGRWSEADRIFTMMLKKR 892



 Score =  137 bits (346), Expect = 1e-29
 Identities = 122/607 (20%), Positives = 257/607 (42%), Gaps = 4/607 (0%)
 Frame = +2

Query: 665  LMSSMSQCNVAPAVHSYTTLMNALYKENRIEEADRLYMEMVDGGFVPDHVLYFTLIKNHQ 844
            + S ++  + + A H    L+  L +  R+ EA R     +     PD  +   L+  H 
Sbjct: 1    MCSRVAAASTSHASHC-ADLLTRLLRRGRLREA-RAVASRLALADAPDPAVSDALVACHS 58

Query: 845  PGCEINLALQLVQAISANGCGIDLSASVNPMLSESAEDIMLEIQRLLIEICRRNMGLANN 1024
               +I+ AL     +  +G     +++   + +  +  +  E   +L+        L  +
Sbjct: 59   RLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDVLVLSMGNPSPLPVS 118

Query: 1025 AFSIYLMALCTAKKLDKALICLDKMVRFGLQPLLSAYNALIKCLLQEGLVGEITSVVEVM 1204
             F++ +  LC+   +DKA    D M+R GL P +  Y +L     +     + + + ++M
Sbjct: 119  DFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCKARRSLDASDMCQLM 178

Query: 1205 EYDGLLPSPTTFLIIINEHCKRGRVQSAFNILHHME-QRGLKPSVGIYDAIIRCLSSENS 1381
               G+         +I   C+ GR++ A ++   M+    ++     Y  +I  L     
Sbjct: 179  LIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGR 238

Query: 1382 INEAEKLFDRMLESSIDLDESIFVTMINAYCKDGRAIQACELFDKIVHFGLQRSSRSYTS 1561
            ++   +++  M++  I  D + +  MI  YCK      A +++  ++  G+    R YT 
Sbjct: 239  VDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYTI 298

Query: 1562 LISGLVKINKIERSCWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRFAFSLVDLMEKNQ 1741
            L++ L K  K+  +    ++M + G  PD V++ S+   F +   + F    +  + K  
Sbjct: 299  LMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKLD 358

Query: 1742 IKRDMITYITLVSGLSRNIRSFDDPWYVEQNKSKEMETMFYQLHHRYMLPNT---RKMEL 1912
                ++   +L  G S              +  KE + +  ++    +LP       M +
Sbjct: 359  CGAKLLELSSLAGGCS------------NMSLQKEADHLLDEIVTSNVLPVNIVLNLMII 406

Query: 1913 SFSSKDEMKLFAMQFIKKIQKSVPVHNLYLFNGVISVICCAGRMQEAYNYFHQMLRKGLC 2092
            +  S+  + + +   + K+       ++  +N VI  +C   RM +A      M  +G+ 
Sbjct: 407  AMCSEGRLDV-SYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVR 465

Query: 2093 PNKVTFTFLIDGHLGSGETDLAIRLFNQMNASGCSPDRSLFNTLIRGFCKAERLIDALSV 2272
            P+  T + ++  +   GE + A+ LF +M   G  P  ++++++I   C+  RL +A + 
Sbjct: 466  PDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEAT 525

Query: 2273 MNAMHKRGFSPCKSSYENLLNCFCARHLSIYALRICEEMVARDYFPRRYNLKQLVTILRQ 2452
            +  M + G +P +  Y +L+N +     +    RI +EM+ R   P  +    L+  L +
Sbjct: 526  LRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVK 585

Query: 2453 HNKVPEA 2473
             NK+ +A
Sbjct: 586  GNKIRKA 592



 Score =  122 bits (307), Expect = 4e-25
 Identities = 132/633 (20%), Positives = 253/633 (39%), Gaps = 48/633 (7%)
 Frame = +2

Query: 488  PDNFTYNTLIQGFVKLGLYDKAWLVFRHMAESGLVPNAITYQLMINQYCIDGKVDCAL-A 664
            PD    + L+    +LG    A   F  + +SG  P+  +   ++   C       A+  
Sbjct: 45   PDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDV 104

Query: 665  LMSSMSQCNVAPAVHSYTTLMNALYKENRIEEADRLYMEMVDGGFVPDHVLYFTLIKNHQ 844
            L+ SM   +  P V  +  L+  L  E  +++A  L+  M+  G  P   +Y +L   + 
Sbjct: 105  LVLSMGNPSPLP-VSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYC 163

Query: 845  PGCEINLALQLVQAISANGCGIDLSASVNPMLSESAEDIMLEIQRLLIEICRRNMG---- 1012
                   A  + Q +   G  +D   S   ++     +  LE     +++ RR  G    
Sbjct: 164  KARRSLDASDMCQLMLIKGMYLDRELS-TALIRVFCREGRLE---PALDVFRRMKGDEHV 219

Query: 1013 -LANNAFSIYLMALCTAKKLDKALICLDKMVRFGLQPLLSAYNALIKCLLQEGLVGEITS 1189
             L   A++  +  L    ++D  L    +M+  G+QP  + YN +I+   +   VG    
Sbjct: 220  QLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMD 279

Query: 1190 VVEVMEYDGLLPSPTTFLIIINEHCKRGRVQSAFNILHHMEQRGLKPSVGIYDAIIRCL- 1366
            + +VM   G+ P    + I++   CK G++  A N+   M + GL P   ++ +I R   
Sbjct: 280  IYKVMIRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFFP 339

Query: 1367 ----------------------------------SSENSINEAEKLFDRMLESSIDLDES 1444
                                              S+ +   EA+ L D ++ S++     
Sbjct: 340  KGWVVLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNI 399

Query: 1445 IFVTMINAYCKDGRAIQACELFDKIVHFGLQRSSRSYTSLISGLVKINKIERSCWYLNRM 1624
            +   MI A C +GR   +  L  K+V +G + S  +Y  +I  L + N+++ +   +  M
Sbjct: 400  VLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIM 459

Query: 1625 FDDGFEPDTVIYTSLISQFVRNGQIRFAFSLVDLMEKNQIKRDMITYITLVSGLSRNIRS 1804
               G  PD    + +++ + + G+I  A  L   M K+ I+  +  Y +++  L R    
Sbjct: 460  QSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCR---- 515

Query: 1805 FDDPWYVEQNKSKEMETMFYQLHHRYMLPN-------TRKMELSFSSKDEMKLFAMQFIK 1963
                      + KE E    Q+    + P+            L+  +++  ++F     +
Sbjct: 516  --------MRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKR 567

Query: 1964 KIQKSVPVHNLYLFNGVISVICCAGRMQEAYNYFHQMLRKGLCPNKVTFTFLIDGHLGSG 2143
             +Q     +   L NG++       ++++A  Y  +ML +G+ P  V +T LI+     G
Sbjct: 568  GLQPGPHAYG-SLINGLVK----GNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKG 622

Query: 2144 ETDLAIRLFNQMNASGCSPDRSLFNTLIRGFCK 2242
            +  L + L   M  +  +PD   +  L+ G C+
Sbjct: 623  DVRLGLDLVVLMMKTNVAPDLITYGALVTGICR 655



 Score =  121 bits (304), Expect = 9e-25
 Identities = 105/492 (21%), Positives = 192/492 (39%), Gaps = 85/492 (17%)
 Frame = +2

Query: 290  LLDSLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNALLR------------------ 415
            +L+ +++  C  G+LD +     ++      PS    N +++                  
Sbjct: 400  VLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIM 459

Query: 416  -----------------GYCKIRNLDMAMSVFVKMIKLNCEPDNFTYNTLIQGFVKLGLY 544
                              YCKI  ++ A+ +F +M K   EP    Y+++I    ++   
Sbjct: 460  QSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRL 519

Query: 545  DKAWLVFRHMAESGLVPNAITYQLMINQYCIDGKVDCALALMSSMSQCNVAPAVHSYTTL 724
             +A    R M   GL P+ I Y  +IN Y +  +      +   M +  + P  H+Y +L
Sbjct: 520  KEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSL 579

Query: 725  MNALYKENRIEEADRLYMEMVDGGFVPDHVLYFTLIKNHQPGCEINLALQLVQAISANGC 904
            +N L K N+I +A      M++ G  P  V+Y  LI       ++ L L LV  +     
Sbjct: 580  INGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNV 639

Query: 905  GIDL---------------SASVNPMLSESAEDIMLEIQRLLIEICRRNMGLANNAFSIY 1039
              DL                  + P L++  ++    + R+L +I     G   +     
Sbjct: 640  APDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKD----- 694

Query: 1040 LMALCTAKKLDKALICLDKMVRFGLQPLLSAYNALIKCLLQEGLVGEITSVVEVMEYDGL 1219
               +CT + +  A   +  +   G+ P L  YN +I  L +   + +  S++ VM+  G+
Sbjct: 695  -NQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGI 753

Query: 1220 LPSPTTFLIIINEHCK-----------------------------------RGRVQSAFN 1294
            LP+  T+ I++N   +                                    GR++ A +
Sbjct: 754  LPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALS 813

Query: 1295 ILHHMEQRGLKPSVGIYDAIIRCLSSENSINEAEKLFDRMLESSIDLDESIFVTMINAYC 1474
             L  M +RG  PS   YD ++  L +EN+I+   +LF+ ML        + + +++    
Sbjct: 814  FLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLLLVLA 873

Query: 1475 KDGRAIQACELF 1510
            KDGR  +A  +F
Sbjct: 874  KDGRWSEADRIF 885



 Score =  117 bits (293), Expect = 2e-23
 Identities = 100/476 (21%), Positives = 199/476 (41%), Gaps = 5/476 (1%)
 Frame = +2

Query: 1067 LDKALICLDKMVRFGLQPLLSAYNALIKCLLQEGLVGEITSVVEVMEYDGLLPSPTT-FL 1243
            +  AL    ++V+ G  P  ++  AL++ +    +  E   V+ V+      P P + F 
Sbjct: 63   ISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDVL-VLSMGNPSPLPVSDFA 121

Query: 1244 IIINEHCKRGRVQSAFNILHHMEQRGLKPSVGIYDAIIRCLSSENSINEAEKLFDRMLES 1423
            ++I   C  G V  A  +   M + GL P V +Y ++           +A  +   ML  
Sbjct: 122  LLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCKARRSLDASDMCQLMLIK 181

Query: 1424 SIDLDESIFVTMINAYCKDGRAIQACELFDKIV-HFGLQRSSRSYTSLISGLVKINKIER 1600
             + LD  +   +I  +C++GR   A ++F ++     +Q  + +YT++I GL +  +++ 
Sbjct: 182  GMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDH 241

Query: 1601 SCWYLNRMFDDGFEPDTVIYTSLISQFVRNGQIRFAFSLVDLMEKNQIKRDMITYITLVS 1780
                 + M D G +PD   Y  +I  + ++  +  A  +  +M +  +  D+  Y  L++
Sbjct: 242  GLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYTILMA 301

Query: 1781 GLSRNIRSFDDPWYVEQNKSKEMETMFYQLHHRYMLPNTRKMELS---FSSKDEMKLFAM 1951
             L ++             K  E E +F ++    + P+   M +S   F  K  + LF  
Sbjct: 302  SLCKD------------GKLGEAENLFDKMLESGLFPD-HVMFISIARFFPKGWVVLFVR 348

Query: 1952 QFIKKIQKSVPVHNLYLFNGVISVICCAGRMQEAYNYFHQMLRKGLCPNKVTFTFLIDGH 2131
            + +K + K      L   + +          +EA +   +++   + P  +    +I   
Sbjct: 349  KALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAM 408

Query: 2132 LGSGETDLAIRLFNQMNASGCSPDRSLFNTLIRGFCKAERLIDALSVMNAMHKRGFSPCK 2311
               G  D++  L  ++ A GC P    +N +I+  C+  R+ DA +++  M  RG  P  
Sbjct: 409  CSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDM 468

Query: 2312 SSYENLLNCFCARHLSIYALRICEEMVARDYFPRRYNLKQLVTILRQHNKVPEARA 2479
            S+   ++  +C       AL +  EM      P       ++  L +  ++ EA A
Sbjct: 469  STNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEA 524



 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 40/169 (23%), Positives = 76/169 (44%)
 Frame = +2

Query: 281  DFDLLDSLVLCYCKLGKLDYARLHFDRIFEMRLVPSKEACNALLRGYCKIRNLDMAMSVF 460
            D  + + ++   C+  K+D A      + +  ++P+      L+    ++ +++ A+ +F
Sbjct: 721  DLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLF 780

Query: 461  VKMIKLNCEPDNFTYNTLIQGFVKLGLYDKAWLVFRHMAESGLVPNAITYQLMINQYCID 640
              +    C  D  TYNT I+G    G   +A      M + G VP+  +Y  ++     +
Sbjct: 781  NSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAE 840

Query: 641  GKVDCALALMSSMSQCNVAPAVHSYTTLMNALYKENRIEEADRLYMEMV 787
              +D  L L   M      P   +YT+L+  L K+ R  EADR++  M+
Sbjct: 841  NAIDIVLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTMML 889