BLASTX nr result

ID: Lithospermum22_contig00017645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017645
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146320.1| PREDICTED: ABC transporter I family member 6...   114   6e-24
ref|XP_002267203.1| PREDICTED: ABC transporter I family member 6...   114   1e-23
ref|NP_187678.1| ABC transporter I family member 6 [Arabidopsis ...   107   8e-22
gb|AAM61568.1| putative ABC transporter ATPase [Arabidopsis thal...   107   8e-22
gb|AAF19582.1|AC011708_25 putative ABC transporter [Arabidopsis ...   107   8e-22

>ref|XP_004146320.1| PREDICTED: ABC transporter I family member 6, chloroplastic-like
           [Cucumis sativus] gi|449523329|ref|XP_004168676.1|
           PREDICTED: ABC transporter I family member 6,
           chloroplastic-like [Cucumis sativus]
          Length = 329

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
 Frame = -3

Query: 304 ARLSFKVEKSRSNLVELKSNTSQRCIDKATASSADSPK-LLLEVKNLSAAISETKQCILK 128
           + L F+    RS  +   +  S   ++  + S +DS K LLLEVK+L+A I+ETKQ ILK
Sbjct: 44  SHLPFRFNLRRSVRI---ATASLSAVNSPSTSFSDSQKSLLLEVKDLTAVIAETKQEILK 100

Query: 127 GVNLTVYQGEVHAVMGKNGSGKSTFAKVLAGHPDYEITGGSV 2
           GVNL VY+GEVHA+MGKNGSGKSTFAKVL GHPDYE+TGGS+
Sbjct: 101 GVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSI 142


>ref|XP_002267203.1| PREDICTED: ABC transporter I family member 6, chloroplastic [Vitis
           vinifera] gi|296087808|emb|CBI35064.3| unnamed protein
           product [Vitis vinifera]
          Length = 321

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/78 (74%), Positives = 66/78 (84%), Gaps = 2/78 (2%)
 Frame = -3

Query: 229 IDKATASSADS--PKLLLEVKNLSAAISETKQCILKGVNLTVYQGEVHAVMGKNGSGKST 56
           +  A AS  DS   KLLLEVK+L+A ISE+KQ ILKGVNL VY+GEVHAVMGKNGSGKST
Sbjct: 55  VHSAEASGVDSRDKKLLLEVKDLTAVISESKQQILKGVNLVVYEGEVHAVMGKNGSGKST 114

Query: 55  FAKVLAGHPDYEITGGSV 2
           F+KVL GHPDYE+TGG+V
Sbjct: 115 FSKVLVGHPDYEVTGGTV 132


>ref|NP_187678.1| ABC transporter I family member 6 [Arabidopsis thaliana]
           gi|75333645|sp|Q9CAF5.1|AB6I_ARATH RecName: Full=ABC
           transporter I family member 6, chloroplastic; Short=ABC
           transporter ABCI.6; Short=AtABCI6; AltName: Full=ABC
           transporter ATPase; AltName: Full=Non-intrinsic ABC
           protein 7; Short=AtNAP7; AltName: Full=Plastid SufC-like
           protein; Flags: Precursor
           gi|12322801|gb|AAG51398.1|AC011560_30 putative ABC
           transporter ATPase; 10053-12032 [Arabidopsis thaliana]
           gi|14334904|gb|AAK59630.1| putative ABC transporter
           ATPase [Arabidopsis thaliana] gi|21281251|gb|AAM44965.1|
           putative ABC transporter ATPase [Arabidopsis thaliana]
           gi|51173055|tpg|DAA05587.1| TPA_exp: plastid SufC-like
           protein [Arabidopsis thaliana]
           gi|332641420|gb|AEE74941.1| ABC transporter I family
           member 6 [Arabidopsis thaliana]
          Length = 338

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/109 (53%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = -3

Query: 325 CNVSSRQARLSFKVEKSRSNLVELKSNTSQRCIDKATASSADSPKL-LLEVKNLSAAISE 149
           CN+ +  A         RS +V   S +S    D       D  ++ LLEV++L A I+E
Sbjct: 44  CNLRANSAAAPILRTTRRSVIVSASSVSSAVDSDSLVEDRDDVGRIPLLEVRDLRAVIAE 103

Query: 148 TKQCILKGVNLTVYQGEVHAVMGKNGSGKSTFAKVLAGHPDYEITGGSV 2
           ++Q ILKGVNL VY+GEVHAVMGKNGSGKSTF+KVL GHPDYE+TGGS+
Sbjct: 104 SRQEILKGVNLVVYEGEVHAVMGKNGSGKSTFSKVLVGHPDYEVTGGSI 152


>gb|AAM61568.1| putative ABC transporter ATPase [Arabidopsis thaliana]
          Length = 338

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/109 (53%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = -3

Query: 325 CNVSSRQARLSFKVEKSRSNLVELKSNTSQRCIDKATASSADSPKL-LLEVKNLSAAISE 149
           CN+ +  A         RS +V   S +S    D       D  ++ LLEV++L A I+E
Sbjct: 44  CNLRANSAAAPILRTTRRSVIVSASSVSSAVDSDSLVEDRDDVGRIPLLEVRDLRAVIAE 103

Query: 148 TKQCILKGVNLTVYQGEVHAVMGKNGSGKSTFAKVLAGHPDYEITGGSV 2
           ++Q ILKGVNL VY+GEVHAVMGKNGSGKSTF+KVL GHPDYE+TGGS+
Sbjct: 104 SRQEILKGVNLVVYEGEVHAVMGKNGSGKSTFSKVLVGHPDYEVTGGSI 152


>gb|AAF19582.1|AC011708_25 putative ABC transporter [Arabidopsis thaliana]
          Length = 268

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/109 (53%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = -3

Query: 325 CNVSSRQARLSFKVEKSRSNLVELKSNTSQRCIDKATASSADSPKL-LLEVKNLSAAISE 149
           CN+ +  A         RS +V   S +S    D       D  ++ LLEV++L A I+E
Sbjct: 44  CNLRANSAAAPILRTTRRSVIVSASSVSSAVDSDSLVEDRDDVGRIPLLEVRDLRAVIAE 103

Query: 148 TKQCILKGVNLTVYQGEVHAVMGKNGSGKSTFAKVLAGHPDYEITGGSV 2
           ++Q ILKGVNL VY+GEVHAVMGKNGSGKSTF+KVL GHPDYE+TGGS+
Sbjct: 104 SRQEILKGVNLVVYEGEVHAVMGKNGSGKSTFSKVLVGHPDYEVTGGSI 152


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