BLASTX nr result

ID: Lithospermum22_contig00017622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017622
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66720.1| hypothetical protein VITISV_027098 [Vitis vinifera]    77   8e-20
ref|XP_002268698.2| PREDICTED: uncharacterized protein LOC100250...    77   2e-19
ref|XP_002518104.1| transcription factor, putative [Ricinus comm...    69   6e-18
gb|ABK94861.1| unknown [Populus trichocarpa]                           75   1e-17
gb|ADL36787.1| MYBR domain class transcription factor [Malus x d...    67   3e-17

>emb|CAN66720.1| hypothetical protein VITISV_027098 [Vitis vinifera]
          Length = 250

 Score = 76.6 bits (187), Expect(2) = 8e-20
 Identities = 43/92 (46%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
 Frame = +3

Query: 3   QRHLQLRMDAQSKYLQSILEKACRXXXXXXXXXXXXXXXXXXXXXFTIKVANDTQ----- 167
           QRHLQLR++AQ KYLQSILEKAC+                       IKV+ND +     
Sbjct: 104 QRHLQLRIEAQGKYLQSILEKACKALKDQAAATAGLEAAREELSELQIKVSNDCEGMNPL 163

Query: 168 EMISASPLSEVPASMGNKNVSNVPAQIGDCSI 263
           E I    LSE+ A++ NKN  NVPA+IGDCS+
Sbjct: 164 ETIKMPCLSEIAAALENKNAVNVPARIGDCSV 195



 Score = 46.6 bits (109), Expect(2) = 8e-20
 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 12/60 (20%)
 Frame = +1

Query: 316 GDCSIDSCLTXXXXXXXXXXXXXHAAALKKRSRPTFANG------------VDWMVSNIG 459
           GDCS+DSCLT              AA +KKRSRP F  G            V+WM++N+G
Sbjct: 191 GDCSVDSCLTSSGSPISPMGSSSRAAVMKKRSRPLFTGGSSLALENNMRQDVEWMMTNMG 250


>ref|XP_002268698.2| PREDICTED: uncharacterized protein LOC100250267 [Vitis vinifera]
          Length = 307

 Score = 76.6 bits (187), Expect(2) = 2e-19
 Identities = 43/92 (46%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
 Frame = +3

Query: 3   QRHLQLRMDAQSKYLQSILEKACRXXXXXXXXXXXXXXXXXXXXXFTIKVANDTQ----- 167
           QRHLQLR++AQ KYLQSILEKAC+                       IKV+ND +     
Sbjct: 161 QRHLQLRIEAQGKYLQSILEKACKALKDQAAATAGLEAAREELSELQIKVSNDCEGMNPL 220

Query: 168 EMISASPLSEVPASMGNKNVSNVPAQIGDCSI 263
           E I    LSE+ A++ NKN  NVPA+IGDCS+
Sbjct: 221 ETIKMPCLSEIAAALENKNAVNVPARIGDCSV 252



 Score = 45.1 bits (105), Expect(2) = 2e-19
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
 Frame = +1

Query: 316 GDCSIDSCLTXXXXXXXXXXXXXHAAALKKRSRPTFANG------------VDWMVSNIG 459
           GDCS+DSCLT               A +KKRSRP F  G            V+WM++N+G
Sbjct: 248 GDCSVDSCLTSSGSPISPMGASSRGAVMKKRSRPLFTGGSSLALENNMRQDVEWMMTNMG 307


>ref|XP_002518104.1| transcription factor, putative [Ricinus communis]
           gi|223542700|gb|EEF44237.1| transcription factor,
           putative [Ricinus communis]
          Length = 303

 Score = 68.9 bits (167), Expect(2) = 6e-18
 Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
 Frame = +3

Query: 3   QRHLQLRMDAQSKYLQSILEKACRXXXXXXXXXXXXXXXXXXXXXFTIKVANDTQEMISA 182
           QR LQLR++AQ KYLQSILEKAC+                       IKV+N+ Q ++ A
Sbjct: 157 QRRLQLRIEAQGKYLQSILEKACKALNDQAAVSAGLEAAREELSELAIKVSNECQGIVPA 216

Query: 183 S-----PLSEVPASMGNKNVSNVPAQIGDCSI 263
                  LSE+  ++ +K+ SN+PA+IGDCS+
Sbjct: 217 DNMKMPSLSELAVALESKSTSNLPARIGDCSV 248



 Score = 48.1 bits (113), Expect(2) = 6e-18
 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 12/60 (20%)
 Frame = +1

Query: 316 GDCSIDSCLTXXXXXXXXXXXXXHAAALKKRSRPTFANG------------VDWMVSNIG 459
           GDCS++SCLT             H A++KKR RP F NG            V+WM+ NIG
Sbjct: 244 GDCSVESCLTSTGSPVSPMGVGSHTASIKKRPRPIFGNGDSLPLEGSMRQEVEWMMGNIG 303


>gb|ABK94861.1| unknown [Populus trichocarpa]
          Length = 309

 Score = 75.1 bits (183), Expect(2) = 1e-17
 Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
 Frame = +3

Query: 3   QRHLQLRMDAQSKYLQSILEKACRXXXXXXXXXXXXXXXXXXXXXFTIKVAN-------- 158
           Q HLQLR++AQ KYLQSILEKAC+                       IKV+N        
Sbjct: 161 QHHLQLRIEAQGKYLQSILEKACKALNDQAVATAGLEAAREELSELAIKVSNECAGIAPL 220

Query: 159 DTQEMISASPLSEVPASMGNKNVSNVPAQIGDCSI 263
           DT +M S   LSE+ A++GN+N SNVPA+IGDCS+
Sbjct: 221 DTMKMPS---LSELAAALGNRNASNVPARIGDCSV 252



 Score = 40.8 bits (94), Expect(2) = 1e-17
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 12/59 (20%)
 Frame = +1

Query: 316 GDCSIDSCLTXXXXXXXXXXXXXHAAALKKRSRPTFANG------------VDWMVSNI 456
           GDCS++SCLT               A+ KKRSRP   NG            V+W +SNI
Sbjct: 248 GDCSVESCLTSTSSPVSPMGVGSQVASTKKRSRPVLGNGDSLPFEGNFRQEVEWTMSNI 306


>gb|ADL36787.1| MYBR domain class transcription factor [Malus x domestica]
          Length = 307

 Score = 67.0 bits (162), Expect(2) = 3e-17
 Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
 Frame = +3

Query: 3   QRHLQLRMDAQSKYLQSILEKACRXXXXXXXXXXXXXXXXXXXXXFTIKVANDTQEMI-- 176
           QR LQLR++AQSKYLQSILEKAC+                       I+V+ND + ++  
Sbjct: 161 QRRLQLRIEAQSKYLQSILEKACKALNDQAATAAGVEAAKEELSELAIRVSNDCEGIVPL 220

Query: 177 ---SASPLSEVPASMGNKNVSNVPAQIGDCSI 263
                  LSE+ A++ N++VSNV A +G+CS+
Sbjct: 221 DSTKIPSLSEIAAALENRDVSNVMAHLGNCSV 252



 Score = 47.8 bits (112), Expect(2) = 3e-17
 Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 12/60 (20%)
 Frame = +1

Query: 316 GDCSIDSCLTXXXXXXXXXXXXXHAAALKKRSRPTFANG------------VDWMVSNIG 459
           G+CS+DSCLT              AAA+KKR RP F NG            V+WM+SNIG
Sbjct: 248 GNCSVDSCLTSTGSPVLPMDMSSLAAAMKKRQRPFFGNGDSLPLESNMRQEVEWMMSNIG 307


Top