BLASTX nr result

ID: Lithospermum22_contig00017607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017607
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518123.1| hypothetical protein RCOM_1020410 [Ricinus c...    90   2e-16
ref|XP_002892238.1| AAA-type ATPase family protein [Arabidopsis ...    82   6e-14
ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity ...    81   1e-13
ref|NP_171966.2| chromosome transmission fidelity protein 18 [Ar...    80   2e-13
ref|XP_004134380.1| PREDICTED: chromosome transmission fidelity ...    79   4e-13

>ref|XP_002518123.1| hypothetical protein RCOM_1020410 [Ricinus communis]
           gi|223542719|gb|EEF44256.1| hypothetical protein
           RCOM_1020410 [Ricinus communis]
          Length = 170

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +3

Query: 6   SSMKVKPQETFKKPSSTALSFFDRF-KASSKCSQNTSSAVNKTATMSEDSRPLLFKFNEG 182
           SSMK+K      KP + + SFFDRF K SSK S NT  AV KT T+  D RPLLFKFNEG
Sbjct: 96  SSMKLKSPGN-SKPCTGSTSFFDRFRKVSSKSSPNTDIAVQKTTTLERDLRPLLFKFNEG 154

Query: 183 YTNAVRRPVRIREFLL 230
           +TNAV+RPVR+REFLL
Sbjct: 155 FTNAVKRPVRMREFLL 170


>ref|XP_002892238.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297338080|gb|EFH68497.1| AAA-type ATPase family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 939

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3    GSSMKVKPQET-FKKPSSTALSFFDRFKASSKCSQNTSSAVNKTATMSEDSRPLLFKFNE 179
            G +   KP  +  KK S TAL+FFDRF+ S K  ++    V K AT   DSRPLLFKFNE
Sbjct: 864  GIATTSKPNSSDVKKASRTALNFFDRFRKSRKDYEDPED-VQKRATAKRDSRPLLFKFNE 922

Query: 180  GYTNAVRRPVRIREFLL 230
            G+TNAV+RPVR+REFLL
Sbjct: 923  GFTNAVKRPVRMREFLL 939


>ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity protein 18 homolog [Vitis
            vinifera]
          Length = 948

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/75 (53%), Positives = 53/75 (70%)
 Frame = +3

Query: 6    SSMKVKPQETFKKPSSTALSFFDRFKASSKCSQNTSSAVNKTATMSEDSRPLLFKFNEGY 185
            +S+K+K     KKP   + +FFDRFK  S     T++ + +  T+  DSRPLLFKFNEG+
Sbjct: 875  ASVKLKSSRDVKKPPRGS-TFFDRFKKLSSKGSQTTNLIQEPVTLERDSRPLLFKFNEGF 933

Query: 186  TNAVRRPVRIREFLL 230
            TNAV+RPV+IREFLL
Sbjct: 934  TNAVKRPVQIREFLL 948


>ref|NP_171966.2| chromosome transmission fidelity protein 18 [Arabidopsis thaliana]
            gi|332189616|gb|AEE27737.1| chromosome transmission
            fidelity protein 18 [Arabidopsis thaliana]
          Length = 943

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3    GSSMKVKPQET-FKKPSSTALSFFDRFKASSKCSQNTSSAVNKTATMSEDSRPLLFKFNE 179
            G++   KP  +  KK S  AL+FFDRF+ S K  ++     N+ AT   DSRPLLFKFNE
Sbjct: 868  GTATTSKPNSSDVKKASRNALNFFDRFRKSRKDYEDPEDVQNR-ATAKRDSRPLLFKFNE 926

Query: 180  GYTNAVRRPVRIREFLL 230
            G+TNAV+RPVR+REFLL
Sbjct: 927  GFTNAVKRPVRMREFLL 943


>ref|XP_004134380.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
            [Cucumis sativus]
          Length = 972

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/74 (55%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = +3

Query: 12   MKVKPQETFKKPSSTALSFFDRF-KASSKCSQNTSSAVNKTATMSEDSRPLLFKFNEGYT 188
            + +K     K PS  + SFFDRF K  SK SQ T S   K  T+  D RPLLFKFNEG+T
Sbjct: 899  VNLKSSGVRKNPSLGSSSFFDRFRKPGSKGSQTTDSIDKKEITLQRDLRPLLFKFNEGFT 958

Query: 189  NAVRRPVRIREFLL 230
            NA++RPVR+R+FLL
Sbjct: 959  NAIKRPVRVRDFLL 972


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