BLASTX nr result

ID: Lithospermum22_contig00017598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017598
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515498.1| Ubiquitin-protein ligase BRE1A, putative [Ri...    98   2e-18
ref|XP_002309636.1| predicted protein [Populus trichocarpa] gi|2...    96   7e-18
emb|CAA16971.1| putative protein [Arabidopsis thaliana] gi|72701...    96   1e-17
gb|AAK25873.1|AF360163_1 unknown protein [Arabidopsis thaliana]        96   1e-17
ref|NP_567889.1| Myosin heavy chain-related protein [Arabidopsis...    96   1e-17

>ref|XP_002515498.1| Ubiquitin-protein ligase BRE1A, putative [Ricinus communis]
            gi|223545442|gb|EEF46947.1| Ubiquitin-protein ligase
            BRE1A, putative [Ricinus communis]
          Length = 776

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 68/160 (42%), Positives = 90/160 (56%), Gaps = 3/160 (1%)
 Frame = +3

Query: 3    REMELKKMKDETNQDGDVSRQLYDLALERAATKGMSDLTTEKVQLEAAELKVEAATSALQ 182
            RE ELK +KDE  +D +  ++LY LA ER   K + +L  EK+QLEAA+L+VEAATSAL 
Sbjct: 641  REKELKGLKDEMIEDANDLKKLYTLAQERIGEKSIGELAIEKLQLEAAQLEVEAATSALL 700

Query: 183  KLTELSRYLLSKP--SMTAEADHNINVS-FLQPHSVVTISDTSKDDNCXXXXXXXXXXXX 353
            KL E+SR LL+K   S+ A+AD   ++S FLQ +S   IS    ++              
Sbjct: 701  KLVEMSRELLNKANLSIMADADAETDISMFLQNYSDPGISMFGNNE-------------- 746

Query: 354  XXXXXXXXXTSKDDNCLAEVTTEITRLLALTENLVKEAGI 473
                           CL EV T + RL A+TE LVKEAG+
Sbjct: 747  ---------------CLKEVKTGVVRLSAMTEQLVKEAGV 771


>ref|XP_002309636.1| predicted protein [Populus trichocarpa] gi|222855612|gb|EEE93159.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 60/157 (38%), Positives = 88/157 (56%)
 Frame = +3

Query: 3   REMELKKMKDETNQDGDVSRQLYDLALERAATKGMSDLTTEKVQLEAAELKVEAATSALQ 182
           +E EL+K+K+E  +D +  R+LY LA ER     + DL  EK++LEAA+L+VEAATSALQ
Sbjct: 587 KEKELRKLKEEAVEDANDLRKLYSLAQERIGESSVGDLAIEKLKLEAAQLEVEAATSALQ 646

Query: 183 KLTELSRYLLSKPSMTAEADHNINVSFLQPHSVVTISDTSKDDNCXXXXXXXXXXXXXXX 362
           KL E+SR LL+K S++ EAD +I +       +V +                        
Sbjct: 647 KLAEMSRELLNKASLSIEADADIFMPNGSGPGLVLL------------------------ 682

Query: 363 XXXXXXTSKDDNCLAEVTTEITRLLALTENLVKEAGI 473
                   +++ C  EV TE+ RL +LTE L+++AGI
Sbjct: 683 --------ENNECFKEVKTEVARLSSLTEQLLQDAGI 711


>emb|CAA16971.1| putative protein [Arabidopsis thaliana] gi|7270123|emb|CAB79937.1|
           putative protein [Arabidopsis thaliana]
          Length = 764

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 64/158 (40%), Positives = 83/158 (52%)
 Frame = +3

Query: 3   REMELKKMKDETNQDGDVSRQLYDLALERAATKGMSDLTTEKVQLEAAELKVEAATSALQ 182
           +E ELKK+K+ET  D +  + LY LA ER   K M DL  E +QLEAA L+VEAATSALQ
Sbjct: 630 KEQELKKLKEETINDSEDLKVLYALAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQ 689

Query: 183 KLTELSRYLLSKPSMTAEADHNINVSFLQPHSVVTISDTSKDDNCXXXXXXXXXXXXXXX 362
           KL ++S  LL++  M+ EAD          H+V+     S+  N                
Sbjct: 690 KLAKMSTELLTQADMSIEAD--------TTHTVMPERGYSEGSN---------------- 725

Query: 363 XXXXXXTSKDDNCLAEVTTEITRLLALTENLVKEAGIV 476
                       CL EV TE+ RL +LTE L++ AGIV
Sbjct: 726 -----------ECLGEVKTEVVRLWSLTEKLLENAGIV 752


>gb|AAK25873.1|AF360163_1 unknown protein [Arabidopsis thaliana]
          Length = 783

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 64/158 (40%), Positives = 83/158 (52%)
 Frame = +3

Query: 3    REMELKKMKDETNQDGDVSRQLYDLALERAATKGMSDLTTEKVQLEAAELKVEAATSALQ 182
            +E ELKK+K+ET  D +  + LY LA ER   K M DL  E +QLEAA L+VEAATSALQ
Sbjct: 649  KEQELKKLKEETINDSEDLKVLYALAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQ 708

Query: 183  KLTELSRYLLSKPSMTAEADHNINVSFLQPHSVVTISDTSKDDNCXXXXXXXXXXXXXXX 362
            KL ++S  LL++  M+ EAD          H+V+     S+  N                
Sbjct: 709  KLAKMSTELLTQADMSIEAD--------TTHTVMPERGYSEGSN---------------- 744

Query: 363  XXXXXXTSKDDNCLAEVTTEITRLLALTENLVKEAGIV 476
                        CL EV TE+ RL +LTE L++ AGIV
Sbjct: 745  -----------ECLGEVKTEVVRLWSLTEKLLENAGIV 771


>ref|NP_567889.1| Myosin heavy chain-related protein [Arabidopsis thaliana]
            gi|23297608|gb|AAN12990.1| unknown protein [Arabidopsis
            thaliana] gi|332660618|gb|AEE86018.1| Myosin heavy
            chain-related protein [Arabidopsis thaliana]
          Length = 783

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 64/158 (40%), Positives = 83/158 (52%)
 Frame = +3

Query: 3    REMELKKMKDETNQDGDVSRQLYDLALERAATKGMSDLTTEKVQLEAAELKVEAATSALQ 182
            +E ELKK+K+ET  D +  + LY LA ER   K M DL  E +QLEAA L+VEAATSALQ
Sbjct: 649  KEQELKKLKEETINDSEDLKVLYALAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQ 708

Query: 183  KLTELSRYLLSKPSMTAEADHNINVSFLQPHSVVTISDTSKDDNCXXXXXXXXXXXXXXX 362
            KL ++S  LL++  M+ EAD          H+V+     S+  N                
Sbjct: 709  KLAKMSTELLTQADMSIEAD--------TTHTVMPERGYSEGSN---------------- 744

Query: 363  XXXXXXTSKDDNCLAEVTTEITRLLALTENLVKEAGIV 476
                        CL EV TE+ RL +LTE L++ AGIV
Sbjct: 745  -----------ECLGEVKTEVVRLWSLTEKLLENAGIV 771


Top