BLASTX nr result
ID: Lithospermum22_contig00017552
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00017552 (439 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327749.1| predicted protein [Populus trichocarpa] gi|2... 91 7e-17 gb|ACN27139.1| unknown [Zea mays] 90 2e-16 ref|XP_002304323.1| predicted protein [Populus trichocarpa] gi|2... 86 4e-15 ref|NP_565427.1| cold shock domain protein 3 [Arabidopsis thalia... 85 7e-15 ref|XP_002886133.1| hypothetical protein ARALYDRAFT_480687 [Arab... 84 1e-14 >ref|XP_002327749.1| predicted protein [Populus trichocarpa] gi|222836834|gb|EEE75227.1| predicted protein [Populus trichocarpa] Length = 235 Score = 91.3 bits (225), Expect = 7e-17 Identities = 55/139 (39%), Positives = 73/139 (52%), Gaps = 24/139 (17%) Frame = -2 Query: 345 IMAQEQKRSRGEVITFSDAKGFGFIKPHDGVEEGDLFVHHSEIKAE-GHRSLWSHQEVEF 169 + A +++RS G V+ FSD KGFGFIKP G + DLFVHHS IK++ G+R+L+ VEF Sbjct: 6 VAATKEERSTGRVVRFSDKKGFGFIKPDAG--DKDLFVHHSAIKSDGGYRTLYEDDVVEF 63 Query: 168 VVVQEGDKFKAVDVTVV-------XXXXXXXXXXXXXXXXXXGCFHCGKSGHLARDCN-- 16 ++ DK++AVDVT GCF+CG GH+AR+CN Sbjct: 64 TILLNDDKYQAVDVTAPGGGPIKRRTTFSGGFNRRNSNTNGGGCFNCGNPGHIARECNNN 123 Query: 15 --------------GGGGG 1 GGGGG Sbjct: 124 SSKSYNYNNNNNRTGGGGG 142 >gb|ACN27139.1| unknown [Zea mays] Length = 187 Score = 89.7 bits (221), Expect = 2e-16 Identities = 58/122 (47%), Positives = 65/122 (53%), Gaps = 14/122 (11%) Frame = -2 Query: 324 RSRGEVITFSDAKGFGFIKPHDGVEEGDLFVHHSEIKAEGHRSLWSHQEVEFVVVQEGD- 148 R RG V F+D KGFGFI P DG E DLFVH S IK+EG RSL +EVEF V EGD Sbjct: 6 RQRGTVKWFNDTKGFGFISPEDGSE--DLFVHQSSIKSEGFRSLAEGEEVEF-SVSEGDD 62 Query: 147 -KFKAVDVT------------VVXXXXXXXXXXXXXXXXXXGCFHCGKSGHLARDCNGGG 7 + KAVDVT GCF CG+ GH+ARDC+ GG Sbjct: 63 GRTKAVDVTGPDGSFVRGGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCSSGG 122 Query: 6 GG 1 GG Sbjct: 123 GG 124 >ref|XP_002304323.1| predicted protein [Populus trichocarpa] gi|222841755|gb|EEE79302.1| predicted protein [Populus trichocarpa] Length = 225 Score = 85.5 bits (210), Expect = 4e-15 Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 10/114 (8%) Frame = -2 Query: 327 KRSRGEVITFSDAKGFGFIKPHDGVEEGDLFVHHSEIKAE-GHRSLWSHQEVEFVVVQEG 151 +RS G V+ FSD KGFGFIKP G + DLFVHHS IK++ G+R+L+ VEF ++ Sbjct: 1 ERSTGRVVRFSDKKGFGFIKPDVG--DKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLTE 58 Query: 150 DKFKAVDVTV---------VXXXXXXXXXXXXXXXXXXGCFHCGKSGHLARDCN 16 DK++A++VT GCF+CG GH+ARDCN Sbjct: 59 DKYQAIEVTAPGGGPIKRRTTTSGGFSRRNNNNNNNGVGCFNCGNPGHIARDCN 112 >ref|NP_565427.1| cold shock domain protein 3 [Arabidopsis thaliana] gi|75165198|sp|Q94C69.1|CSP3_ARATH RecName: Full=Cold shock domain-containing protein 3; Short=AtCSP3 gi|14334920|gb|AAK59638.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis thaliana] gi|17104541|gb|AAL34159.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis thaliana] gi|148726892|dbj|BAF63841.1| cold shock domain protein 3 [Arabidopsis thaliana] gi|330251603|gb|AEC06697.1| cold shock domain protein 3 [Arabidopsis thaliana] Length = 301 Score = 84.7 bits (208), Expect = 7e-15 Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 1/113 (0%) Frame = -2 Query: 336 QEQKRSRGEVITFSDAKGFGFIKPHDGVEEGDLFVHHSEIKAEGHRSLWSHQEVEFVVVQ 157 Q RS G+V FSD KG+GFI P DG EE LFVH S I ++G RSL + VE+ + Sbjct: 6 QSAARSIGKVSWFSDGKGYGFITPDDGGEE--LFVHQSSIVSDGFRSLTLGESVEYEIAL 63 Query: 156 EGD-KFKAVDVTVVXXXXXXXXXXXXXXXXXXGCFHCGKSGHLARDCNGGGGG 1 D K KA++VT CF+CG+ GH+A+DC+GG GG Sbjct: 64 GSDGKTKAIEVTA-PGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGG 115 >ref|XP_002886133.1| hypothetical protein ARALYDRAFT_480687 [Arabidopsis lyrata subsp. lyrata] gi|297331973|gb|EFH62392.1| hypothetical protein ARALYDRAFT_480687 [Arabidopsis lyrata subsp. lyrata] Length = 299 Score = 84.0 bits (206), Expect = 1e-14 Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 1/113 (0%) Frame = -2 Query: 336 QEQKRSRGEVITFSDAKGFGFIKPHDGVEEGDLFVHHSEIKAEGHRSLWSHQEVEFVVVQ 157 Q R G+V F D KG+GFI P DG EE LFVH S I ++G+RSL + VE+ + Sbjct: 4 QSAARYIGKVNWFGDGKGYGFITPDDGGEE--LFVHQSSIVSDGYRSLTVGESVEYSITL 61 Query: 156 EGD-KFKAVDVTVVXXXXXXXXXXXXXXXXXXGCFHCGKSGHLARDCNGGGGG 1 D K KAV+VT CF+CG+ GH+A+DC+GGGGG Sbjct: 62 GSDGKTKAVNVTA-PGGGSLNKKENSSRGNGGSCFNCGEVGHMAKDCDGGGGG 113