BLASTX nr result

ID: Lithospermum22_contig00017456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017456
         (1365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cuc...   309   1e-81
ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like ex...   308   3e-81
ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vit...   304   4e-80
emb|CBI19050.3| unnamed protein product [Vitis vinifera]              301   3e-79
ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Gly...   300   8e-79

>ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cucumis sativus]
          Length = 1125

 Score =  309 bits (791), Expect = 1e-81
 Identities = 161/279 (57%), Positives = 200/279 (71%), Gaps = 4/279 (1%)
 Frame = +3

Query: 3    YTHFTSPLRRYPDIVVHRTLAAAVEAEKIYLKHNKSSLIGYGVNNTRCFTGVSFDGEALS 182
            YTHFTSPLRRYPDIVVHRTLAAA+EAEK+YLKH            TRCFTG+ FD +A  
Sbjct: 847  YTHFTSPLRRYPDIVVHRTLAAAIEAEKMYLKHKGVIQKVNSNEETRCFTGIYFDKDAAD 906

Query: 183  SSEAQEVLSEAASKHRVPGNDILAGIAEHCNERKLASRHVKDDIQKLYMWALLKKKQILF 362
            S E +E LS AA KH VP + +L  +A HCN+RKLAS+HV D I+KLYMWALLKKK+ILF
Sbjct: 907  SLEGREALSSAALKHGVPCSKLLLDVALHCNDRKLASKHVADGIEKLYMWALLKKKKILF 966

Query: 363  SEARVLGVGPKFMSIYICKLAIERRIHYDDIEGLTVEWLDTTSTLVLSQPLNKRIIKRGS 542
            S+ARVLG+GP+FMS+YI KLAIERRI+YD++EGL VEWL+TTSTLVL    ++R  +   
Sbjct: 967  SDARVLGLGPRFMSVYIQKLAIERRIYYDEVEGLAVEWLETTSTLVLRFFCSRRSHRSRG 1026

Query: 543  PSKGKALEEVALVVDPID---SASNLDVFCQYGKGDSGS-LIKGDITSTREPETSNVEPE 710
              K KALE+VALV+ P D       L V    G    GS +++ D         + V+P 
Sbjct: 1027 SVKWKALEDVALVISPCDQNVKERTLGVSSNGGASKGGSAVVEQDSNLKSHVSDTGVDPA 1086

Query: 711  VFPLTLQSLSKVPVAVHAIGGDDGPLSIAVRLYVSSYFK 827
            +FPLT++ LS +PVA+HA+GGDDGP+ I VRLY+SSY +
Sbjct: 1087 IFPLTVRLLSTIPVALHAVGGDDGPIDIGVRLYMSSYLR 1125


>ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2-like [Cucumis
            sativus]
          Length = 1159

 Score =  308 bits (788), Expect = 3e-81
 Identities = 163/279 (58%), Positives = 200/279 (71%), Gaps = 4/279 (1%)
 Frame = +3

Query: 3    YTHFTSPLRRYPDIVVHRTLAAAVEAEKIYLKHNKSSLIGYGVNNTRCFTGVSFDGEALS 182
            YTHFTSPLRRYPDIVVHRTLAAA+EAEK+YLKH            TRCFTG+ FD +A  
Sbjct: 882  YTHFTSPLRRYPDIVVHRTLAAAIEAEKMYLKHKGVIQKVNSNEETRCFTGIYFDKDAAD 941

Query: 183  SSEAQEVLSEAASKHRVPGNDILAGIAEHCNERKLASRHVKDDIQKLYMWALLKKKQILF 362
            S E +E LS AA KH VP + +L  +A HCN+RKLAS+HV D I+KLYMWALLKKK+ILF
Sbjct: 942  SLEGREALSSAALKHGVPCSKLLLDVALHCNDRKLASKHVADGIEKLYMWALLKKKKILF 1001

Query: 363  SEARVLGVGPKFMSIYICKLAIERRIHYDDIEGLTVEWLDTTSTLVLSQPLNKRIIKRGS 542
            S+ARVLG+GP+FMS+YI KLAIERRI+YD++EGL VEWL+TTSTLVL     +    RGS
Sbjct: 1002 SDARVLGLGPRFMSVYIQKLAIERRIYYDEVEGLAVEWLETTSTLVLRFCSRRSHRSRGS 1061

Query: 543  PSKGKALEEVALVVDPID---SASNLDVFCQYGKGDSGS-LIKGDITSTREPETSNVEPE 710
              K KALE+VALV+ P D       L V    G    GS +++ D         + V+P 
Sbjct: 1062 -VKWKALEDVALVISPCDQNVKERTLGVSSNGGASKGGSAVVEQDSNLKSHVSDTGVDPA 1120

Query: 711  VFPLTLQSLSKVPVAVHAIGGDDGPLSIAVRLYVSSYFK 827
            +FPLT++ LS +PVA+HA+GGDDGP+ I VRLY+SSY +
Sbjct: 1121 IFPLTVRLLSTIPVALHAVGGDDGPIDIGVRLYMSSYLR 1159


>ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vitis vinifera]
          Length = 1131

 Score =  304 bits (778), Expect = 4e-80
 Identities = 156/285 (54%), Positives = 202/285 (70%), Gaps = 11/285 (3%)
 Frame = +3

Query: 3    YTHFTSPLRRYPDIVVHRTLAAAVEAEKIYLKHN-KSSLIGYGVNNTRCFTGVSFDGEAL 179
            YTHFTSPLRRYPDI+VHRTLAAA+EAE++YLKH  K   +  G    RCFTG+ FD  A 
Sbjct: 846  YTHFTSPLRRYPDIIVHRTLAAAIEAEELYLKHGAKIQKVKNGEEMRRCFTGIHFDKNAA 905

Query: 180  SSSEAQEVLSEAASKHRVPGNDILAGIAEHCNERKLASRHVKDDIQKLYMWALLKKKQIL 359
             S E Q+ LS AASKHR+P  +ILA +  +CNERKLASRH KD  ++LYMW LLKKK++L
Sbjct: 906  ESVEGQKALSVAASKHRLPCTEILADVVAYCNERKLASRHAKDGCERLYMWVLLKKKEVL 965

Query: 360  FSEARVLGVGPKFMSIYICKLAIERRIHYDDIEGLTVEWLDTTSTLVLSQPLNKRIIKRG 539
             SEARVLG+GP+FMSIYI KL IERRI+YD++EGLTVEWLD TSTLV++   NK    RG
Sbjct: 966  LSEARVLGLGPRFMSIYIHKLGIERRIYYDEVEGLTVEWLDATSTLVVNLSTNKCSRWRG 1025

Query: 540  SPSKGKALEEVALVVDPIDSASNLDVF----CQYGKGDSG------SLIKGDITSTREPE 689
            +  K + LE+VA V+ P +    +D F     ++G    G      SL    ++ +  P+
Sbjct: 1026 NQGKYRQLEDVAWVIRPCNLKQEVDAFGDTVNEWGATTVGRDASVASLRPRCMSESGVPD 1085

Query: 690  TSNVEPEVFPLTLQSLSKVPVAVHAIGGDDGPLSIAVRLYVSSYF 824
             + ++P  FPLT+++LS +PV +HA+GGDDGPL I  RLY++SY+
Sbjct: 1086 ANEIDPLFFPLTVRTLSTIPVVLHAVGGDDGPLDIGARLYMNSYY 1130


>emb|CBI19050.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score =  301 bits (771), Expect = 3e-79
 Identities = 153/275 (55%), Positives = 194/275 (70%), Gaps = 1/275 (0%)
 Frame = +3

Query: 3    YTHFTSPLRRYPDIVVHRTLAAAVEAEKIYLKHN-KSSLIGYGVNNTRCFTGVSFDGEAL 179
            YTHFTSPLRRYPDI+VHRTLAAA+EAE++YLKH  K   +  G    RCFTG+ FD  A 
Sbjct: 747  YTHFTSPLRRYPDIIVHRTLAAAIEAEELYLKHGAKIQKVKNGEEMRRCFTGIHFDKNAA 806

Query: 180  SSSEAQEVLSEAASKHRVPGNDILAGIAEHCNERKLASRHVKDDIQKLYMWALLKKKQIL 359
             S E Q+ LS AASKHR+P  +ILA +  +CNERKLASRH KD  ++LYMW LLKKK++L
Sbjct: 807  ESVEGQKALSVAASKHRLPCTEILADVVAYCNERKLASRHAKDGCERLYMWVLLKKKEVL 866

Query: 360  FSEARVLGVGPKFMSIYICKLAIERRIHYDDIEGLTVEWLDTTSTLVLSQPLNKRIIKRG 539
             SEARVLG+GP+FMSIYI KL IERRI+YD++EGLTVEWLD TSTLV++   NK    RG
Sbjct: 867  LSEARVLGLGPRFMSIYIHKLGIERRIYYDEVEGLTVEWLDATSTLVVNLSTNKCSRWRG 926

Query: 540  SPSKGKALEEVALVVDPIDSASNLDVFCQYGKGDSGSLIKGDITSTREPETSNVEPEVFP 719
            +  K + LE+VA V+ P +    +D  C    G               P+ + ++P  FP
Sbjct: 927  NQGKYRQLEDVAWVIRPCNLKQEVDA-CMSESG--------------VPDANEIDPLFFP 971

Query: 720  LTLQSLSKVPVAVHAIGGDDGPLSIAVRLYVSSYF 824
            LT+++LS +PV +HA+GGDDGPL I  RLY++SY+
Sbjct: 972  LTVRTLSTIPVVLHAVGGDDGPLDIGARLYMNSYY 1006


>ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
          Length = 1133

 Score =  300 bits (767), Expect = 8e-79
 Identities = 161/285 (56%), Positives = 198/285 (69%), Gaps = 10/285 (3%)
 Frame = +3

Query: 3    YTHFTSPLRRYPDIVVHRTLAAAVEAEKIYLKHNKSSLIGYGVNNT--RCFTGVSFDGEA 176
            YTHFTSPLRRYPDI+VHRTL A +EAE++Y+KH K+ L GY       RCFT +SFD  A
Sbjct: 854  YTHFTSPLRRYPDIIVHRTLLATIEAEELYMKHQKA-LQGYKEVKVQKRCFTDISFDKIA 912

Query: 177  LSSSEAQEVLSEAASKHRVPGNDILAGIAEHCNERKLASRHVKDDIQKLYMWALLKKKQI 356
              S E +E LS AA KH VP  + LA IA +CNERKLASR+VKD   KLY+W LLKKK++
Sbjct: 913  AESMEGREALSAAAVKHSVPCAETLADIAAYCNERKLASRNVKDACDKLYIWFLLKKKEV 972

Query: 357  LFSEARVLGVGPKFMSIYICKLAIERRIHYDDIEGLTVEWLDTTSTLVLSQPLNKRIIKR 536
            L SEAR+LG+GP+FMSIYI KLAIERRI+YD++EGLTVEWL+TTSTLVLS   +K   +R
Sbjct: 973  LLSEARILGLGPRFMSIYIQKLAIERRIYYDEVEGLTVEWLETTSTLVLSMSTSKCAFRR 1032

Query: 537  GSPSKGKALEEVALVVDPIDSASNLDVFCQYGKGDSGSLIKGDITSTREPE--------T 692
            G P+K +A EEVAL+  P     NLD             +   IT+    E         
Sbjct: 1033 GCPNKWRAFEEVALLTCPY----NLDFTMDNSNQSEVMKVDDSITAMDREEPISRSDLSE 1088

Query: 693  SNVEPEVFPLTLQSLSKVPVAVHAIGGDDGPLSIAVRLYVSSYFK 827
            + ++P  FPLT+  LS +PVA+HA+GGDDGPL I VRLY+SSYF+
Sbjct: 1089 TEIDPAFFPLTVCLLSTIPVALHAVGGDDGPLDIGVRLYMSSYFR 1133


Top