BLASTX nr result
ID: Lithospermum22_contig00017342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00017342
(1391 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258... 137 1e-36
ref|XP_002510728.1| RNA binding protein, putative [Ricinus commu... 146 1e-32
ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2... 138 3e-30
ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatul... 119 5e-30
ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2... 136 1e-29
>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
Length = 346
Score = 137 bits (344), Expect(2) = 1e-36
Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
Frame = +2
Query: 320 QQCLPIYGVPGTVNASMYPYNQLGQTVPANPGYAAMQGYGIPSHQILQFGGPNVNPVTTS 499
QQ L IYGVPGTVN ++YPY QLGQT+P++ GY +QGY +P HQ +QFGG +VN ++TS
Sbjct: 183 QQYLQIYGVPGTVNTAIYPYGQLGQTLPSSHGYTTVQGYAMPGHQFMQFGGSSVNAISTS 242
Query: 500 SVPTIQGPYPSGMAAPVLPQTQFLLPRPS-QFSQGSGSDQNVG*GVDQNTL 649
+PTIQ PYP+G+AAPV Q QF++P S QF QGSG DQ G D+ +
Sbjct: 243 PIPTIQAPYPTGIAAPVPAQPQFIVPAHSPQFIQGSGPDQTTGYEKDETVV 293
Score = 43.9 bits (102), Expect(2) = 1e-36
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +1
Query: 733 ILEVIQCHAHQRNQLSESLLVTERATWKMQIAV 831
I++VI HAHQR+++SESLL+ E+ WK+++A+
Sbjct: 311 IIKVIHSHAHQRSRMSESLLMAEKEPWKLRVAL 343
Score = 92.8 bits (229), Expect = 2e-16
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = +1
Query: 1 GRLRSPVPYVGSLPAARGAYVGSFGYQQPLPYMYQQGLMYPPYGYTAYNQDYVYPQ 168
GRLR PY+GS+PA RG+YVG+FGYQQP+ Y YQQG MYP YGY AY +YVYPQ
Sbjct: 119 GRLRPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQ 174
>ref|XP_002510728.1| RNA binding protein, putative [Ricinus communis]
gi|223551429|gb|EEF52915.1| RNA binding protein,
putative [Ricinus communis]
Length = 325
Score = 146 bits (369), Expect = 1e-32
Identities = 66/102 (64%), Positives = 81/102 (79%)
Frame = +2
Query: 320 QQCLPIYGVPGTVNASMYPYNQLGQTVPANPGYAAMQGYGIPSHQILQFGGPNVNPVTTS 499
QQ L IYGVPGTVNA++YPY QLGQT+P GY A+QG+ +P HQI+QF GP+VN +TTS
Sbjct: 157 QQYLQIYGVPGTVNAAVYPYGQLGQTLPGGHGYTAVQGFAMPGHQIVQFSGPSVNAITTS 216
Query: 500 SVPTIQGPYPSGMAAPVLPQTQFLLPRPSQFSQGSGSDQNVG 625
+PTIQ PY +G+AAPV Q QF++P PSQ+ QGSGSDQ G
Sbjct: 217 PMPTIQAPYATGLAAPVPAQPQFIVPAPSQYMQGSGSDQTAG 258
Score = 73.2 bits (178), Expect = 2e-10
Identities = 32/56 (57%), Positives = 37/56 (66%)
Frame = +1
Query: 1 GRLRSPVPYVGSLPAARGAYVGSFGYQQPLPYMYQQGLMYPPYGYTAYNQDYVYPQ 168
GRLR PY ++ RG Y+G YQQPL Y YQQG+MY PYGY Y +YVYPQ
Sbjct: 96 GRLRPAAPYTANVQTPRGTYIG---YQQPLSYSYQQGMMYHPYGYAGYGPEYVYPQ 148
>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
predicted protein [Populus trichocarpa]
Length = 286
Score = 138 bits (348), Expect = 3e-30
Identities = 65/102 (63%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Frame = +2
Query: 323 QCLPIYGVPGTVNASMYPYNQLGQTVPANPGYAAMQGYGIPSHQILQFGGPNVNPVTTSS 502
Q L IYGVPGTVN+ MYPY QL Q VP GY +M GY +P HQI+QFGGP+VN +TTSS
Sbjct: 185 QYLQIYGVPGTVNSGMYPYGQLSQNVPGGHGYTSMPGYAVPGHQIVQFGGPSVNAITTSS 244
Query: 503 VPTIQGPYPSGMAAPVLPQTQFLLPRPS-QFSQGSGSDQNVG 625
+PTIQ PY +G+AA V Q+QF++P PS Q+ QGSGSDQ G
Sbjct: 245 MPTIQAPYHTGIAAAVPAQSQFIVPAPSPQYMQGSGSDQTTG 286
Score = 81.3 bits (199), Expect = 6e-13
Identities = 36/56 (64%), Positives = 40/56 (71%)
Frame = +1
Query: 1 GRLRSPVPYVGSLPAARGAYVGSFGYQQPLPYMYQQGLMYPPYGYTAYNQDYVYPQ 168
GR R PY+ S+ RG YVGSFGYQQP+ Y YQQGLMY PYGY AY +YVY Q
Sbjct: 119 GRPRPAAPYITSVQTPRGTYVGSFGYQQPVSYGYQQGLMYNPYGYAAYGPEYVYQQ 174
>ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatula]
gi|355492925|gb|AES74128.1| RNA-binding protein 24-B
[Medicago truncatula]
Length = 371
Score = 119 bits (297), Expect(2) = 5e-30
Identities = 59/99 (59%), Positives = 70/99 (70%)
Frame = +2
Query: 320 QQCLPIYGVPGTVNASMYPYNQLGQTVPANPGYAAMQGYGIPSHQILQFGGPNVNPVTTS 499
QQ L IYGVPG +N ++YPY QLGQ +P GY AMQGY +P HQI+ +GG NVN +TTS
Sbjct: 182 QQYLQIYGVPGAMNTTIYPYGQLGQAIPGGHGYTAMQGYTVPGHQIVPYGGSNVNAITTS 241
Query: 500 SVPTIQGPYPSGMAAPVLPQTQFLLPRPSQFSQGSGSDQ 616
VP IQ PYP +AAPV Q QF++ QF QGSG DQ
Sbjct: 242 PVPAIQVPYPR-IAAPVPGQPQFIV--SPQFMQGSGPDQ 277
Score = 40.0 bits (92), Expect(2) = 5e-30
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = +1
Query: 658 AGLRAAVLLHEWRASNLALQNHSSCILEVIQCHAHQRNQLSESLLVTERATWKMQIAVSS 837
AGLRA LL EWRASNLALQ + V + +AHQ +SES E W +Q A S
Sbjct: 280 AGLRAVELLLEWRASNLALQ------MYVKKSYAHQ--VVSESAPDGE-GKWNVQAAYSI 330
Query: 838 KHHVSKTYVSANVMDNMQSR---GLGDPRIGFWRTHSN 942
Y+ ++ +S G RIGFW+ N
Sbjct: 331 WMFTLLLYLYPILLVLRKSGISIGSMAIRIGFWQPFRN 368
Score = 92.8 bits (229), Expect = 2e-16
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +1
Query: 1 GRLRSPVPYVGSLPAARGAYVGSFGYQQPLPYMYQQGLMYPPYGYTAYNQDYVYPQ 168
GR+R PYVGSL ARGAYVG +GYQQPL Y YQQG++YPPYGYT Y +YVYPQ
Sbjct: 117 GRVRPASPYVGSLQPARGAYVGGYGYQQPLSYGYQQGMVYPPYGYTTYGPEYVYPQ 172
>ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1|
predicted protein [Populus trichocarpa]
Length = 287
Score = 136 bits (343), Expect = 1e-29
Identities = 64/103 (62%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Frame = +2
Query: 320 QQCLPIYGVPGTVNASMYPYNQLGQTVPANPGYAAMQGYGIPSHQILQFGGPNVNPVTTS 499
QQ L IYGVPGTVN MYPY Q GQ VP GY MQGY +P H I+QFGGP VN +TTS
Sbjct: 185 QQYLQIYGVPGTVNTGMYPYGQFGQNVPGGHGYTTMQGYAVPGHHIMQFGGPGVNAMTTS 244
Query: 500 SVPTIQGPYPSGMAAPVLPQTQFLLPRPS-QFSQGSGSDQNVG 625
+PTIQ PYP+G+AA V Q QF++P PS Q+ SGSDQ G
Sbjct: 245 PLPTIQAPYPTGIAAAVPAQQQFIVPAPSPQYMHSSGSDQTTG 287
Score = 82.4 bits (202), Expect = 3e-13
Identities = 36/56 (64%), Positives = 40/56 (71%)
Frame = +1
Query: 1 GRLRSPVPYVGSLPAARGAYVGSFGYQQPLPYMYQQGLMYPPYGYTAYNQDYVYPQ 168
GRLR PY+ S+ RG Y GSFGYQQP+ Y YQQGLMY PYGY AY +YVY Q
Sbjct: 120 GRLRPAPPYIASVQTPRGTYAGSFGYQQPVSYGYQQGLMYHPYGYAAYGPEYVYQQ 175