BLASTX nr result

ID: Lithospermum22_contig00017340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017340
         (1269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64
ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|2...   244   3e-62
ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   240   6e-61
ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   239   1e-60
ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   234   5e-59

>ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|222854832|gb|EEE92379.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  251 bits (642), Expect = 2e-64
 Identities = 129/333 (38%), Positives = 189/333 (56%), Gaps = 11/333 (3%)
 Frame = +1

Query: 181  KMSSDGSTHWCHSCSQPVVILRPNAVCPNCSGGFILELEDVVSSNT--------EENDNN 336
            +MSS  +THWC+SC +PV +   +A CP CSGGF+ EL+D+   N         +++ +N
Sbjct: 3    RMSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGMDGDDDHDN 62

Query: 337  RPRLVEVISNFLREQVSARSGTISHSRTRSDLGSDRNSSWNPLLIFSGDAPVSMPGNGVL 516
               L+E  S F+R++++ RS      R+RSD   + N  + PLLIF G  P  + GNG L
Sbjct: 63   MFGLMEAFSAFMRQRMADRSHN-HDIRSRSDSIPEHNPGFGPLLIFGGQIPFRLSGNGGL 121

Query: 517  EFL---NEALGYRREQGGDYYIGPGVEEYFEHITASDQRAPAPTSRSHIDALPSIKISKK 687
            E L   +  + + R   GDY++GPG+EE FE ++A+D+R P P +RS IDA+P+IKI++K
Sbjct: 122  EALFSGSPGVAFARGNAGDYFVGPGLEELFEQLSANDRRGPPPATRSSIDAMPTIKITQK 181

Query: 688  HVRSDSHCAVCKEKFELGTQAKKLPCKHIYHSDCIVPWLERSSSCPVCRKEMPSERSNEN 867
            H+RSDSHC VCK+KFELG++A+++PC H+YHSDCIVPWL + +SCPVCR+E+P + SN  
Sbjct: 182  HLRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQELPPQGSNSG 241

Query: 868  NTNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSFWPFG 1047
            ++ Q                                                    WPF 
Sbjct: 242  HSYQSSSSRSRSSNYSGRENSREGRRNPLSY------------------------LWPFR 277

Query: 1048 SSRSNSHQNRSETPAVTTNNQETHYADYSNWPF 1146
            SS S+S+ + +   +  T ++  H   YS WPF
Sbjct: 278  SSNSSSNHDETPGSSSPTMHENNHQMGYSGWPF 310


>ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|222867840|gb|EEF04971.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  244 bits (623), Expect = 3e-62
 Identities = 130/335 (38%), Positives = 189/335 (56%), Gaps = 14/335 (4%)
 Frame = +1

Query: 184  MSSDGSTHWCHSCSQPVVILRPNAVCPNCSGGFILELEDV--------VSSNTEENDNNR 339
            MSS  +THWC+SC +PV +   ++ CP CSGGF+ EL+D+           +++++ + R
Sbjct: 1    MSSSRNTHWCYSCRRPVRLRGRDSACPYCSGGFVQELDDMHRISPLDFFGMDSDDDRDQR 60

Query: 340  PRLVEVISNFLREQVSARSGTISHSRTRSDLGSDRNSSWNPLLIFSGDAPVSMPGNGVLE 519
              L+E  S+F+R++++ RS      R+RSD     N  + PLLIF G  P  + GNG  E
Sbjct: 61   FGLMEAFSDFMRQRMADRSHN-HDIRSRSDSVPGHNPGFGPLLIFGGQVPFRLSGNGGFE 119

Query: 520  FLNEA---LGYRREQGGDYYIGPGVEEYFEHITASDQRAPAPTSRSHIDALPSIKISKKH 690
             L      + + R   GDY+IGPG+EE FE ++A+DQR P P +RS IDA+P+IKI++KH
Sbjct: 120  ALFSGAPGVAFARGNAGDYFIGPGLEELFEQLSANDQRGPPPATRSSIDAMPTIKITQKH 179

Query: 691  VRSDSHCAVCKEKFELGTQAKKLPCKHIYHSDCIVPWLERSSSCPVCRKEMPSERSNENN 870
            +RSDSHC VCK+KFELG++A+++PC H+YHSDCIVPWL + +SCPVCR+E+P + S+  +
Sbjct: 180  LRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQELPPQGSSSRH 239

Query: 871  TNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSFWPFGS 1050
            + Q                                                    WPF S
Sbjct: 240  SYQSSSSRSRSSNYSGRENSRGGRRNPLSY------------------------LWPFRS 275

Query: 1051 SRSNSHQN---RSETPAVTTNNQETHYADYSNWPF 1146
            S S+S+ +    S +PA+  NN    +  YS WPF
Sbjct: 276  SNSSSNHDETPESSSPAMHENNP---HMGYSGWPF 307


>ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 309

 Score =  240 bits (612), Expect = 6e-61
 Identities = 134/339 (39%), Positives = 192/339 (56%), Gaps = 17/339 (5%)
 Frame = +1

Query: 184  MSSDGSTHWCHSCSQPVVILRPNAVCPNCSGGFILELEDVVSSNTE---ENDNNRPR--- 345
            MS+  +THWC+SC +PV + R +AVCP+C+ GF+ EL D+V  N     E DNN  R   
Sbjct: 1    MSNSRNTHWCYSCRRPVWLGRRDAVCPSCNEGFVHELNDMVHVNPFDLFEMDNNEERDQR 60

Query: 346  --LVEVISNFLREQVSARSGTISHSRTRSDLGSDRNSSWNPLLIFSGDAPVSMPGNGVLE 519
              L+E  S F+R Q++ R G     R ++D   + ++ + PLLIF G  P  + G+G  E
Sbjct: 61   LGLMETFSAFMRHQMADR-GRSHDIRAQTDSNPEHSAGFAPLLIFGGQIPFRLSGHGGFE 119

Query: 520  FLNEA---LGYRREQGGDYYIGPGVEEYFEHITASDQRAPAPTSRSHIDALPSIKISKKH 690
             L      +G  R   GDY+IGPG+EE FE ++A++++ P P SRS IDA+P+IKI+++H
Sbjct: 120  ALFNGAPGIGLTRGNTGDYFIGPGLEELFEQLSANNRQGPPPASRSSIDAMPTIKITQRH 179

Query: 691  VRSDSHCAVCKEKFELGTQAKKLPCKHIYHSDCIVPWLERSSSCPVCRKE-MPSERSNEN 867
            +RSDSHC VCK+KFE+G++A+++PC H+YHSDCIVPWL + +SCPVCR+E +P   S+ N
Sbjct: 180  LRSDSHCPVCKDKFEVGSEARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELLPQGLSSSN 239

Query: 868  NTNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSF-WPF 1044
             +                                                   +SF WPF
Sbjct: 240  RSTN----------------------------GRSRSASLSSSGRESHGRRNPFSFLWPF 271

Query: 1045 GSSRSNSHQ----NRSETPAVTTNNQETHYADYSNWPFE 1149
             SS S+S+     + S TP +  N+   H+A YS WPFE
Sbjct: 272  RSSHSSSNDEATGSSSPTPTIPENSHH-HHAGYSGWPFE 309


>ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Glycine
            max] gi|356577674|ref|XP_003556949.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 2 [Glycine
            max]
          Length = 309

 Score =  239 bits (610), Expect = 1e-60
 Identities = 137/337 (40%), Positives = 190/337 (56%), Gaps = 15/337 (4%)
 Frame = +1

Query: 184  MSSDGSTHWCHSCSQPVVILRPNAVCPNCSGGFILELEDVVSSNTEE---NDNNRPR--- 345
            MS+  +THWC+SC +PV + R + VCP+C+ GF+ EL D+V  N  +    DNN  R   
Sbjct: 1    MSNSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGMDNNEERDQR 60

Query: 346  --LVEVISNFLREQVSARSGTISHSRTRSDLGSDRNSSWNPLLIFSGDAPVSMPGNGVLE 519
              L+E  S F+R Q++ R G     R R+D   + ++S+ PLLIF G  P  +  +G  E
Sbjct: 61   LGLMETFSAFMRHQMADR-GRSHDIRVRTDSNPEHSASFAPLLIFGGHIPFRLSRHGGFE 119

Query: 520  FL-NEALGYRREQG--GDYYIGPGVEEYFEHITASDQRAPAPTSRSHIDALPSIKISKKH 690
             L N A G    QG  GDY+IGPG+EE FE ++A++++ P P SRS IDA+P+IKI ++H
Sbjct: 120  ALFNGAPGIGLTQGNTGDYFIGPGLEELFEQLSANNRQGPLPASRSSIDAMPTIKIVQRH 179

Query: 691  VRSDSHCAVCKEKFELGTQAKKLPCKHIYHSDCIVPWLERSSSCPVCRKEMPSERSNENN 870
            +RSDSHC VCK+KFELG++A+++PC H+YHSDCIVPWL + +SCPVCR+E+P +  + +N
Sbjct: 180  LRSDSHCPVCKDKFELGSKARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELPPQGLSSSN 239

Query: 871  TNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSF-WPFG 1047
                                                                +SF WPF 
Sbjct: 240  ---------------------------GGANGRSRSARVSSSGRESHGRRNPFSFLWPFR 272

Query: 1048 SSRSNSHQNR--SETPAVT-TNNQETHYADYSNWPFE 1149
            SS S+S+     S TP  T   N   H+A YS WPFE
Sbjct: 273  SSHSSSNDEATGSSTPTPTIPENSHHHHAGYSGWPFE 309


>ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
            gi|449529445|ref|XP_004171710.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 305

 Score =  234 bits (596), Expect = 5e-59
 Identities = 125/334 (37%), Positives = 184/334 (55%), Gaps = 14/334 (4%)
 Frame = +1

Query: 190  SDGSTHWCHSCSQPVVILRPNAVCPNCSGGFILELE--------DVVSSNTEENDNNRPR 345
            S  +THWC+ C QPV +   +  C +C+GGF+ EL+        D+  ++  E  N R  
Sbjct: 2    STANTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNEYQNRRLG 61

Query: 346  LVEVISNFLREQVSARSGTISHSRTRSDLGSDRNSSWNPLLIFSGDAPVSMPGNGVLE-F 522
            L+E+ SNF+R+++  R+      R R D   D    + P LIF G  PV + G+G  E F
Sbjct: 62   LLELFSNFMRQRLVDRNDI----RGRLDSIPDHGPGFGPWLIFGGQIPVRLSGHGGFEAF 117

Query: 523  LN--EALGYRREQGGDYYIGPGVEEYFEHITASDQRAPAPTSRSHIDALPSIKISKKHVR 696
             N    +G  R  GGDY+IGPG+EE FE ++A+D+R P P SRS IDA+P +KI+++H+R
Sbjct: 118  FNGVPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIR 177

Query: 697  SDSHCAVCKEKFELGTQAKKLPCKHIYHSDCIVPWLERSSSCPVCRKEMPSERSNENNTN 876
            S+SHC VC++KFELG++A+++PC H+YHSDCIVPWL + +SCPVCR+E+P++ S  ++++
Sbjct: 178  SNSHCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGSSHSS 237

Query: 877  QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSFWPFGSSR 1056
                                                               S WPF +S 
Sbjct: 238  SGSNNSSRNSRDRENGRTTQGRRNPFT------------------------SLWPFRASS 273

Query: 1057 SNSHQNR---SETPAVTTNNQETHYADYSNWPFE 1149
            SNS+ +    S +PA+   NQ  H   Y  WPF+
Sbjct: 274  SNSNHSATTGSNSPALHETNQ--HETGYYGWPFD 305


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