BLASTX nr result

ID: Lithospermum22_contig00017278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017278
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|2...   344   2e-92
ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methy...   339   7e-91
ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|2235287...   336   4e-90
ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferas...   317   3e-84
ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methy...   313   4e-83

>ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|222865317|gb|EEF02448.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  344 bits (883), Expect = 2e-92
 Identities = 177/231 (76%), Positives = 196/231 (84%)
 Frame = -2

Query: 876 MSGAGTPDFYYREALRLGYVARSAFKLLQMQNKFKLISPGSAVLDLGCAPGAWLQVACQS 697
           MSGAGTPDF+YREA RLGYVARSAFKLLQ+Q K KLI+PGS+VLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYVARSAFKLLQIQKKHKLIAPGSSVLDLGCAPGAWLQVACQS 60

Query: 696 LGALKNGGAVVGIDTKKVKVPSAYCDARVKTVCGDVFKLQKDQIRALSPKEKGFSVILSD 517
           LG LKNGGAVVGID KKVKVP  YCD+RV+TVC DV KL K+Q+RALSP++KGFSV+LSD
Sbjct: 61  LGPLKNGGAVVGIDLKKVKVPPLYCDSRVQTVCADVMKLPKNQVRALSPRQKGFSVVLSD 120

Query: 516 MCPLVSGITTRDAALSAELGMQALSLAVGEKASAQSESDNIHEQSDSPTSLPVKGGGILL 337
           MCPLVSGITTRDAALSAELGMQAL LAVG  A+A  +     ++  + +       GIL 
Sbjct: 121 MCPLVSGITTRDAALSAELGMQALGLAVGRAATAHLDEIRT-DRLLNDSVCTADDNGILQ 179

Query: 336 PGGHLVIKLLESEDVKEFSQICKPLFRKAVFLRPKATRSCSREAYLICQGL 184
           PGGHLVIKLLESED KEFS+ICKPLFRKA +LRPKATRS SRE YLICQGL
Sbjct: 180 PGGHLVIKLLESEDNKEFSRICKPLFRKASWLRPKATRSSSREIYLICQGL 230


>ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methyltransferase E [Vitis
           vinifera] gi|296086215|emb|CBI31656.3| unnamed protein
           product [Vitis vinifera]
          Length = 233

 Score =  339 bits (869), Expect = 7e-91
 Identities = 180/234 (76%), Positives = 193/234 (82%), Gaps = 2/234 (0%)
 Frame = -2

Query: 876 MSGAGTPDFYYREALRLGYVARSAFKLLQMQNKFKLISPGSAVLDLGCAPGAWLQVACQS 697
           MSGAGTPDF+YREA RLGY ARSAFKLLQMQ ++KLI PGS+VLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYAARSAFKLLQMQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 696 LGALKNGGAVVGIDTKKVKVPSAYCDARVKTVCGDVFKLQKDQIRALSPKEKGFSVILSD 517
           LG LKNGG VVGID KKVKVPS +CD+RVKTVC DV KL KD+IRA SP+ KGFSVILSD
Sbjct: 61  LGPLKNGGVVVGIDLKKVKVPSMHCDSRVKTVCADVMKLPKDEIRAFSPQRKGFSVILSD 120

Query: 516 MCPLVSGITTRDAALSAELGMQALSLAVGEKASAQSESDNIH--EQSDSPTSLPVKGGGI 343
           MCPLVSGITT+DA LSAELGMQAL LAV   A A S  D I   E  D  TS P    GI
Sbjct: 121 MCPLVSGITTKDAVLSAELGMQALHLAVRGPALAPS-GDEIQKGEHHDDSTSGP-DDDGI 178

Query: 342 LLPGGHLVIKLLESEDVKEFSQICKPLFRKAVFLRPKATRSCSREAYLICQGLQ 181
           L PGGHLVIKLLESED + FS+ICKPLFRKA +LRPKATRS SRE YLICQGL+
Sbjct: 179 LQPGGHLVIKLLESEDAQGFSRICKPLFRKASWLRPKATRSSSREIYLICQGLR 232


>ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|223528799|gb|EEF30805.1| ftsj,
           putative [Ricinus communis]
          Length = 228

 Score =  336 bits (862), Expect = 4e-90
 Identities = 171/232 (73%), Positives = 196/232 (84%)
 Frame = -2

Query: 876 MSGAGTPDFYYREALRLGYVARSAFKLLQMQNKFKLISPGSAVLDLGCAPGAWLQVACQS 697
           MSGAG PDF+YREA RLGYVARSAFKLLQ+Q + KLI+PGS+VLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQHKLITPGSSVLDLGCAPGAWLQVACQS 60

Query: 696 LGALKNGGAVVGIDTKKVKVPSAYCDARVKTVCGDVFKLQKDQIRALSPKEKGFSVILSD 517
           LG LKNGG+VVGID KKVKVP+ YCDARVKTVC DV  L +DQ+RALS ++KGFSV+LSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPNPYCDARVKTVCADVMNLPRDQVRALSLQQKGFSVVLSD 120

Query: 516 MCPLVSGITTRDAALSAELGMQALSLAVGEKASAQSESDNIHEQSDSPTSLPVKGGGILL 337
           MCP VSGITT+DAALS ELGMQAL +A+G  ASA  + +N   Q+D  TS      G+L 
Sbjct: 121 MCPPVSGITTKDAALSMELGMQALDIAIGGAASAHPDDEN---QNDDSTS-GENDNGVLQ 176

Query: 336 PGGHLVIKLLESEDVKEFSQICKPLFRKAVFLRPKATRSCSREAYLICQGLQ 181
            GGHLVIKLLESED++EF++ICKPLFRKA +LRPKATRS SRE YLICQGL+
Sbjct: 177 AGGHLVIKLLESEDIQEFTRICKPLFRKASWLRPKATRSSSREIYLICQGLK 228


>ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferase E [Medicago
           truncatula] gi|355517752|gb|AES99375.1| Ribosomal RNA
           large subunit methyltransferase E [Medicago truncatula]
          Length = 238

 Score =  317 bits (812), Expect = 3e-84
 Identities = 160/233 (68%), Positives = 189/233 (81%), Gaps = 1/233 (0%)
 Frame = -2

Query: 876 MSGAGTPDFYYREALRLGYVARSAFKLLQMQNKFKLISPGSAVLDLGCAPGAWLQVACQS 697
           M+ +G PDF+Y+EA RLGYVARSAFKL+Q+Q + KLI PGS+VLDLGCAPG+WLQVACQS
Sbjct: 1   MAKSGAPDFFYKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQS 60

Query: 696 LGALKNGGAVVGIDTKKVKVPSAYCDARVKTVCGDVFKLQKDQIRALSPKEKGFSVILSD 517
           LG   NGG+V+GID KKVKVP+++CD+RVKTV  DV  L K Q+R LSPK+KGFSVILSD
Sbjct: 61  LGPFHNGGSVLGIDHKKVKVPTSHCDSRVKTVAADVMTLPKQQLRDLSPKQKGFSVILSD 120

Query: 516 MCPLVSGITTRDAALSAELGMQALSLAVGEKAS-AQSESDNIHEQSDSPTSLPVKGGGIL 340
           MCPLVSGITT+DAALS ELGM+AL LAVG+ AS   S+ DN+ E  +         GG+L
Sbjct: 121 MCPLVSGITTKDAALSFELGMRALDLAVGKVASVCNSDGDNLDEVKERCDPSGADDGGLL 180

Query: 339 LPGGHLVIKLLESEDVKEFSQICKPLFRKAVFLRPKATRSCSREAYLICQGLQ 181
             GGHLV+KLLESED KE +QICKPLF K+V+LRPKATR  SRE YLICQGL+
Sbjct: 181 RVGGHLVVKLLESEDAKEINQICKPLFTKSVWLRPKATRPSSREIYLICQGLK 233


>ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like
           [Cucumis sativus] gi|449528435|ref|XP_004171210.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           E-like [Cucumis sativus]
          Length = 238

 Score =  313 bits (802), Expect = 4e-83
 Identities = 165/235 (70%), Positives = 191/235 (81%), Gaps = 4/235 (1%)
 Frame = -2

Query: 876 MSGAGTPDFYYREALRLGYVARSAFKLLQMQNKFKLISPGSAVLDLGCAPGAWLQVACQS 697
           MSGAG PDF+YREA RLGYVARSAFKLLQ+QN+FKLI+ GS+VLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 696 LGALKNGGAVVGIDTKKVKVPSAYCDARVKTVCGDVFKLQKDQIRALSPKEKGFSVILSD 517
           LG  +NGG+V+GID KKVKVP  +CD+RV+TV  DV  L K ++++LSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 516 MCPLVSGITTRDAALSAELGMQALSLAVGEKASAQSESDNIH----EQSDSPTSLPVKGG 349
           MCPLVSGITTRDAALS ELGMQA++LA+GE  +A    D IH    +  D  TS      
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGE--AALGVGDVIHGKDKDSVDDSTSAS-DCD 177

Query: 348 GILLPGGHLVIKLLESEDVKEFSQICKPLFRKAVFLRPKATRSCSREAYLICQGL 184
           G+L  GGHLV+KLLESED +EFS++ KPLFRKA +LRPKATRS SRE YLICQ L
Sbjct: 178 GVLRQGGHLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL 232


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