BLASTX nr result
ID: Lithospermum22_contig00017264
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00017264
(2115 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 130 9e-57
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 144 2e-53
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum] 143 7e-45
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 128 7e-44
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 140 2e-43
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 130 bits (327), Expect(4) = 9e-57
Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Frame = -1
Query: 2079 ISNFVLNCFKLPRGTLDDLNMTMARFFWANGDGEKDIHWKAWDKLCDDKEHG*LGFKELV 1900
+ + ++CFK+P+ + MA F+W N + +HWKAW L K G LGFKE+
Sbjct: 800 LPTYTMSCFKIPKTICQQIESVMAEFWWKNKKEGRGLHWKAWCHLSRPKAVGGLGFKEIE 859
Query: 1899 CMNLALLVKQGWIVAIQEASLLFKLLKGRYFHRSTFMNSKLGANPSYWCRSLLEGRKVLE 1720
N+ALL KQ W + ++ SL+ K+ K RYF +S +N+ LG+ PS+ +S+ E + +++
Sbjct: 860 AFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPLNAPLGSRPSFAWKSIYEAQVLIK 919
Query: 1719 KGIRWRVGNGWSMNICSDQWVPRETDFNVFGVRNMEVSSVSQLIVNG------------- 1579
+GIR +GNG ++N+ +D W+ + V+ + VSQ N
Sbjct: 920 QGIRAVIGNGETINVWTDPWIGAKPAKAAQAVKRSHL--VSQYAANSIHVVKDLLLPDGR 977
Query: 1578 DWDRQRVEGMFGRVYASHILSIPLSRRLIQDKLIWHHTWSGVYLTCSGY 1432
DW+ V +F +IL++ + +D+ W ++ SG Y SGY
Sbjct: 978 DWNWNLVSLLFPDNTQENILALRPGGKETRDRFTWEYSRSGHYSVKSGY 1026
Score = 72.4 bits (176), Expect(4) = 9e-57
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Frame = -3
Query: 910 QNPLPQLVNWGERQA--WHHPSVRWLKLNTGASWFKTDKRGAIGCVCRNESGNFLGARWV 737
+ P PQ+ + + W PS W+K NT +W K +G V RN +G L
Sbjct: 1198 KEPQPQVTSSTRDRCVKWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTGRLLWLGLR 1257
Query: 736 KLPRVASAIAAEAMALRLGLEFTYMTGWKRLGVESDSRQVIQMLTKRQQVTSGLEVLVGD 557
LP S + E ALR + ++R+ ESDS+ ++ ++ + S L + D
Sbjct: 1258 ALPSQQSVLETEVEALRWAVLSLSRFNYRRVIFESDSQYLVSLIQNEMDIPS-LAPRIQD 1316
Query: 556 ILHIVTRL-EVKFQFTCRSSNNVA-HTIAHSDSMGEMEATWLSSPPFWLSS 410
I +++ EVKFQFT R NNVA T S S+ + S P W+ +
Sbjct: 1317 IRNLLRHFEEVKFQFTRREGNNVADRTARESLSLMNYDPKMYSITPDWIKN 1367
Score = 64.7 bits (156), Expect(4) = 9e-57
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = -2
Query: 1367 LGAAVDPC*KNVWSLQVSPRMKSFIWKCLNNILPTKDRLRRRGILIDSQCVLCKHANENL 1188
L ++DP + +W L V P++ F+W+C+NN L L R + + CV C E +
Sbjct: 1043 LQPSLDPIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETV 1102
Query: 1187 MHLFLDCPFSCRIWFSTPL 1131
HL CPF+ W +PL
Sbjct: 1103 NHLLFKCPFARLTWAISPL 1121
Score = 23.1 bits (48), Expect(4) = 9e-57
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 1047 ENSARIGNVLWFLWKYRNGI*GRG 976
++ A I +LW LWK RN + +G
Sbjct: 1152 DHHALIPWILWRLWKNRNDLVFKG 1175
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 144 bits (363), Expect(4) = 2e-53
Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 2/230 (0%)
Frame = -1
Query: 2088 SSTISNFVLNCFKLPRGTLDDLNMTMARFFWANGDGEKDIHWKAWDKLCDDKEHG*LGFK 1909
+ +I +V+ LP+ D+ M FFW + + I W +W K+C K+ G LGF+
Sbjct: 265 AQSIPTYVMQLLLLPKDLCRDIESMMNGFFWDSNPQCRSIRWMSWGKMCKQKKDGGLGFR 324
Query: 1908 ELVCMNLALLVKQGWIVAIQEASLLFKLLKGRYFHRSTFMNSKLGANPSYWCRSLLEGRK 1729
+L NLALL KQGW SL+ ++ + RYF S+F+N++LG+NPSY RS+L +
Sbjct: 325 KLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQG 384
Query: 1728 VLEKGIRWRVGNGWSMNICSDQWVPRETDFNVF--GVRNMEVSSVSQLIVNGDWDRQRVE 1555
+L++G W + +G + + D W+P ++ + V + V +LI G W +
Sbjct: 385 LLKRGCYWSIASGTKVQVWGDSWLPDSSNRLIITPPVAGFDGIKVDELITEGLWREDFIR 444
Query: 1554 GMFGRVYASHILSIPLSRRLIQDKLIWHHTWSGVYLTCSGYKCARAMKRN 1405
F A ILSIPL +D++ W G Y SGY R +++
Sbjct: 445 DKFMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQS 494
Score = 68.6 bits (166), Expect(4) = 2e-53
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Frame = -3
Query: 865 WHHPSVRWLKLNTGASWFKTDKRGAIGCVCRNESGNFLGARWVKLPRVASAIAAEAMALR 686
W P W+K+N + F +GAIG V R+ G F+G P EA+ +R
Sbjct: 664 WQKPDYGWIKINVDGAVFPD--KGAIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVR 721
Query: 685 LGLEFTYMTGWKRLGVESDSRQVIQMLTKRQQVTSGLEVLVGDILHIVTRL-EVKFQFTC 509
L + + R+ VE+D +V+Q + + + ++ D L ++ L +V+ +
Sbjct: 722 EVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYAR 781
Query: 508 RSSNNVAHTIAHSDSMGEMEATWLSSPPFWLSSALSHDV 392
RS+N+ AH +A+ W +PP + S L +DV
Sbjct: 782 RSANSAAHCLANGACSFTSLHIWGYTPPQCILSCLHYDV 820
Score = 43.1 bits (100), Expect(4) = 2e-53
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Frame = -2
Query: 1334 VWSLQVSPRMKSFIWKCLNNILPTKDRLRRRGILIDSQCVLCKHANENLMHLFLDCPFSC 1155
+W + P++ +F W+ N LPT+ L R + C +C+ E +H ++C +
Sbjct: 511 LWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAAR 570
Query: 1154 RIW-----------FSTPLNICTTGYPWTSFK*WWVHLLNLICWGV 1050
+W F + ++ T + + F + +L +CWG+
Sbjct: 571 DVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYL--AVCWGL 614
Score = 23.5 bits (49), Expect(4) = 2e-53
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -1
Query: 1023 VLWFLWKYRNGI*GRGNIW 967
V W LW RN + G IW
Sbjct: 610 VCWGLWWRRNDVVWNGRIW 628
>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
Length = 593
Score = 143 bits (360), Expect(3) = 7e-45
Identities = 75/219 (34%), Positives = 114/219 (52%), Gaps = 2/219 (0%)
Frame = -1
Query: 2082 TISNFVLNCFKLPRGTLDDLNMTMARFFWANGDGEKDIHWKAWDKLCDDKEHG*LGFKEL 1903
+IS +++ CF+LP GT D + M F+W +HW++W+KLC K +G LGF+ L
Sbjct: 39 SISTYIMGCFELPEGTCDRIEKMMCNFYWGGDRNGSKMHWRSWEKLCRSKRNGGLGFRRL 98
Query: 1902 VCMNLALLVKQGWIVAIQEASLLFKLLKGRYFHRSTFMNSKLGANPSYWCRSLLEGRKVL 1723
N A+L KQGW + SL +L+ +Y+ R + + SY RS+L+G ++L
Sbjct: 99 KNFNRAMLAKQGWRLLTLPNSLAATILRAKYYPRKSPLEISSSPYSSYTWRSILKGSQLL 158
Query: 1722 EKGIRWRVGNGWSMNICSDQWVP-RETDFNVFGVRNMEV-SSVSQLIVNGDWDRQRVEGM 1549
+KGI WR+G G ++ SD W+P +T + ++ + VS I NG W+ +
Sbjct: 159 QKGIEWRIGQGNTVRTWSDPWIPGSDTGLPKYHSPGSDLYTHVSDFIQNGGWNENLLRLC 218
Query: 1548 FGRVYASHILSIPLSRRLIQDKLIWHHTWSGVYLTCSGY 1432
F + IL I LS R D + W G Y SGY
Sbjct: 219 FEEEDVTRILQIRLSLRRPLDMVRWKFIKDGEYTVRSGY 257
Score = 62.8 bits (151), Expect(3) = 7e-45
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = -2
Query: 1340 KNVWSLQVSPRMKSFIWKCLNNILPTKDRLRRRGILIDSQCVLCKHANENLMHLFLDCPF 1161
K W L+ PR+K+ +W+ ++N L + L RRGI +D C C +E HLF CP+
Sbjct: 282 KTCWGLRCPPRIKTLLWRLIDNNLSVRTNLTRRGIQVDEVCPCCAGPSETAAHLFFCCPY 341
Query: 1160 SCRIW 1146
+ IW
Sbjct: 342 TLDIW 346
Score = 24.3 bits (51), Expect(3) = 7e-45
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 1092 IMVGSSSQFNLLGCPENSARIGNVLWFLWKYRNGI 988
I++ S N+ E S R LW +W+ RN I
Sbjct: 361 ILLAIDSLLNIRDPVEQSRRAAT-LWIIWRVRNSI 394
Score = 63.5 bits (153), Expect = 2e-07
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Frame = -3
Query: 865 WHHPSVRWLKLNTGASWFKTDKRGAIGCVCRNESGNFLGARWVKLPRVASAIAAEAMALR 686
W+ P+ + K+N A + ++ G +G V R+++G F+ A P + E A+
Sbjct: 436 WNAPTAGFYKINVDAG-LRAERGGQVGIVVRDDTGAFVMATTRSFPNLVHPTLLEGQAVY 494
Query: 685 LGLEFTYMTGWKRLGVESDSRQVIQMLTKRQQVTSGLEVLVGDILHIVTRL-EVKFQFTC 509
GLEF G +R+ +ESD V+ L+K S L ++ D +++ +V+
Sbjct: 495 TGLEFANALGLERVELESDCLPVVMQLSKGYTDRSDLSNIIDDCKMLLSNFQQVRIAHVR 554
Query: 508 RSSNNVAHTIAHSDSMGEMEATWLSSPPFWLSSALSHD 395
R +N AH +A + E S PP + S + +
Sbjct: 555 REANQAAHEMAKMTIPPDRELLVFSWPPDCICSIIEKE 592
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 128 bits (321), Expect(3) = 7e-44
Identities = 74/220 (33%), Positives = 122/220 (55%), Gaps = 6/220 (2%)
Frame = -1
Query: 2070 FVLNCFKLPRGTLDDLNMTMARFFWANGDGEKDIHWKAWDKLCDDKEHG*LGFKELVCMN 1891
+V++CFKLP+ L M F+W + ++ IHW +W +L K+ G GFK+L C N
Sbjct: 802 YVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHWLSWQRLTLPKDQGGFGFKDLQCFN 861
Query: 1890 LALLVKQGWIVAIQEASLLFKLLKGRYFHRSTFMNSKLGANPSYWCRSLLEGRKVLEKGI 1711
ALL KQ W V ++ SL ++ + RYF S F+++ G+ PSY RS+L GR++L +G+
Sbjct: 862 QALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSYAWRSILFGRELLMQGL 921
Query: 1710 RWRVGNGWSMNICSDQWVPRETDFNVFGVR---NMEVSSVSQLI--VNGDWDRQRVEGMF 1546
R +GNG + +D+W+ ++ R N+++ VSQLI + +W+ + +F
Sbjct: 922 RTVIGNGQKTFVWTDKWLHDGSNRRPLNRRRFINVDL-KVSQLIDPTSRNWNLNMLRDLF 980
Query: 1545 GRVYASHIL-SIPLSRRLIQDKLIWHHTWSGVYLTCSGYK 1429
IL PL + +D W H+ +G+Y +GY+
Sbjct: 981 PWKDVEIILKQRPLFFK--EDSFCWLHSHNGLYSVKTGYE 1018
Score = 72.0 bits (175), Expect(3) = 7e-44
Identities = 26/69 (37%), Positives = 45/69 (65%)
Frame = -2
Query: 1334 VWSLQVSPRMKSFIWKCLNNILPTKDRLRRRGILIDSQCVLCKHANENLMHLFLDCPFSC 1155
+W+L +P+++ F+WK L+ +P +DRLR RGI D C++C NE + H+ +CP +
Sbjct: 1045 IWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLAR 1104
Query: 1154 RIWFSTPLN 1128
++W T L+
Sbjct: 1105 QVWAITHLS 1113
Score = 26.6 bits (57), Expect(3) = 7e-44
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = -1
Query: 1023 VLWFLWKYRNGI--*GRGNI 970
+LWFLWK RN + G+G+I
Sbjct: 1150 ILWFLWKNRNALLFEGKGSI 1169
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 140 bits (352), Expect(2) = 2e-43
Identities = 78/235 (33%), Positives = 126/235 (53%), Gaps = 3/235 (1%)
Frame = -1
Query: 2088 SSTISNFVLNCFKLPRGTLDDLNMTMARFFWANGDGEKDIHWKAWDKLCDDKEHG*LGFK 1909
+ I F + CF L + + ++ +AR++W+N + E +HW +W+KL + K G LGF+
Sbjct: 928 AQAIPTFAMGCFDLTKDICEQISKMIARYWWSNQEKENKMHWLSWEKLTEPKWAGGLGFR 987
Query: 1908 ELVCMNLALLVKQGWIVAIQEASLLFKLLKGRYFHRSTFMNSKLGANPSYWCRSLLEGRK 1729
++ NLA+L KQGW + SL ++LK +Y+ ++K AN SY RS+ G
Sbjct: 988 DIHAFNLAMLAKQGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYTWRSICRGLL 1047
Query: 1728 VLEKGIRWRVGNGWSMNICSDQWVPRETDFNVFGVRNME-VSSVSQLI--VNGDWDRQRV 1558
L G+ WRVGNG ++NI SD W+P + R V+ V +LI G WD + +
Sbjct: 1048 TLRDGMIWRVGNGAAINIWSDPWIPSDHTRRPITPRGRNLVTRVEELIDPSTGSWDVELL 1107
Query: 1557 EGMFGRVYASHILSIPLSRRLIQDKLIWHHTWSGVYLTCSGYKCARAMKRNGDLR 1393
F + I +IP+ + D L WH+ G++ S YK ++R+G+L+
Sbjct: 1108 TQTFWPEDVNMIRTIPVHIEM-DDMLAWHYDEKGLFSVKSAYK----VQRDGELQ 1157
Score = 64.7 bits (156), Expect(2) = 2e-43
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = -2
Query: 1340 KNVWSLQVSPRMKSFIWKCLNNILPTKDRLRRRGILIDSQCVLCKHANENLMHLFLDCPF 1161
K VW +Q+ ++K FIW+ +NIL + L++RG+ +DS+C++C NE+ HLF C
Sbjct: 1178 KKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFFKCKK 1237
Query: 1160 SCRIWFSTPLNI 1125
++W L I
Sbjct: 1238 VKKVWQENNLEI 1249