BLASTX nr result

ID: Lithospermum22_contig00017236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00017236
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA40508.1| beta-tubulin, partial [Mus musculus]                    67   1e-08
ref|XP_004175569.1| PREDICTED: tubulin beta-2 chain-like [Taenio...    66   1e-08
ref|XP_004139067.1| PREDICTED: tubulin beta-2 chain-like [Cucumi...    66   1e-08
gb|AGE44289.1| beta-tubulin [Dimocarpus longan]                        66   1e-08
gb|ELV13988.1| Tubulin beta-2 chain [Tupaia chinensis]                 66   1e-08

>gb|AAA40508.1| beta-tubulin, partial [Mus musculus]
          Length = 100

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -3

Query: 288 SVEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 190
           + EGMDEMEFTEAESNMNDLVSEYQQYQDATAD
Sbjct: 54  TAEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 86


>ref|XP_004175569.1| PREDICTED: tubulin beta-2 chain-like [Taeniopygia guttata]
          Length = 445

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -3

Query: 282 EGMDEMEFTEAESNMNDLVSEYQQYQDATAD 190
           EGMDEMEFTEAESNMNDLVSEYQQYQDATAD
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATAD 431


>ref|XP_004139067.1| PREDICTED: tubulin beta-2 chain-like [Cucumis sativus]
           gi|449476160|ref|XP_004154657.1| PREDICTED: tubulin
           beta-2 chain-like [Cucumis sativus]
          Length = 447

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -3

Query: 282 EGMDEMEFTEAESNMNDLVSEYQQYQDATAD 190
           EGMDEMEFTEAESNMNDLVSEYQQYQDATAD
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATAD 431


>gb|AGE44289.1| beta-tubulin [Dimocarpus longan]
          Length = 446

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -3

Query: 282 EGMDEMEFTEAESNMNDLVSEYQQYQDATAD 190
           EGMDEMEFTEAESNMNDLVSEYQQYQDATAD
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATAD 431


>gb|ELV13988.1| Tubulin beta-2 chain [Tupaia chinensis]
          Length = 295

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -3

Query: 282 EGMDEMEFTEAESNMNDLVSEYQQYQDATAD 190
           EGMDEMEFTEAESNMNDLVSEYQQYQDATAD
Sbjct: 251 EGMDEMEFTEAESNMNDLVSEYQQYQDATAD 281


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