BLASTX nr result
ID: Lithospermum22_contig00017233
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00017233
(2002 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22720.3| unnamed protein product [Vitis vinifera] 570 e-160
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s... 546 e-153
emb|CBI26210.3| unnamed protein product [Vitis vinifera] 451 e-124
ref|XP_002321920.1| predicted protein [Populus trichocarpa] gi|2... 446 e-123
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s... 439 e-120
>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
Length = 524
Score = 570 bits (1468), Expect = e-160
Identities = 295/531 (55%), Positives = 393/531 (74%), Gaps = 6/531 (1%)
Frame = -2
Query: 1896 MVPQQGIKLAVYLVASYFGDLNAKVCDCLLRRGTLTLANIIMFTDLSGVNVKNCLLVLIH 1717
M Q G++LAV+L++S+FG+L AKVCDCLLR+GTLTLA++I FT+L VK+C+LVLI
Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60
Query: 1716 HNCVQAFAVQEDGAMGKLPKVTTKYMALFDNIIHHMRFPKFIEIVSNELGKECEEIFEGL 1537
HNCVQAFA+Q++ G+ P+V T+YMALF NI+H MRF KF+ IVS EL KECEEI EGL
Sbjct: 61 HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120
Query: 1536 LQHGRLSLNQILDRIKQTANQGNSA-EDSVQDNFHKLVQARFVERCXXXXXXXXXXXXEX 1360
LQHGRL+L QILDR K ++G +D+++++F KLV+A FVERC E
Sbjct: 121 LQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEE 180
Query: 1359 XXXXXXXXXXKVL----ETIEQXXXXXXAPLESMRF-LVDDTWTNPSEEKDEETSHGVTI 1195
L +TIEQ AP+++ RF ++ +T T D + S VT
Sbjct: 181 TPARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGT------DVDDSPNVTA 234
Query: 1194 GQKRKLDSIESDDVSLLADGKKEILWRVNFEEFVRCLRHKACVENIRRRMNVEAGIVLEA 1015
G+KRK D++E D + A +K++LWR NFEEFVRCLRHKAC+ N++ R++ A IVL A
Sbjct: 235 GEKRKQDALELDKETG-ASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSA 293
Query: 1014 ILELSRKSEAKVKTVNTVPLSVNAMYDQVIKKEAGLGMNLESTRAALGQLGCEDAMLGTD 835
+LE +R E KVKT N+VPLS++ +++ V+K EAG M LE R +L QLGC + G
Sbjct: 294 MLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAA 353
Query: 834 DSFSIDLKTIIEIAQNEEVESIVLKRYGREAYRMFRLLSRAEHLIETDKIADTTFVEKKD 655
+S+S+DLK IIE+AQN+EVESI LKRYGR+AYR+FRLLS++ L+ETDKI+DTTFVEKKD
Sbjct: 354 ESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKD 413
Query: 654 TLKLLYRLWTDNYLQMQKVNVPGAKQSEFLLWKVNKQPLWENVLDEMYHAALNLRLRIAH 475
T K+LY+LW D YLQM+K+N+ G++QS+FLLWKV K LW +VL+EMYH+ALNL LR+A+
Sbjct: 414 TAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAY 473
Query: 474 EQEQEKEILQIPKERLIGELGNRYKRLVKVRIILESSLMNLDGAILLFHEF 322
E EQE+EI+Q+P+E+ +G LGNR++RL KVRI+LESSLM LD AI+LF++F
Sbjct: 474 ELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 524
>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
vinifera]
Length = 511
Score = 546 bits (1407), Expect = e-153
Identities = 288/529 (54%), Positives = 382/529 (72%), Gaps = 4/529 (0%)
Frame = -2
Query: 1896 MVPQQGIKLAVYLVASYFGDLNAKVCDCLLRRGTLTLANIIMFTDLSGVNVKNCLLVLIH 1717
M Q G++LAV+L++S+FG+L AKVCDCLLR+GTLTLA++I FT+L VK+C+LVLI
Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60
Query: 1716 HNCVQAFAVQEDGAMGKLPKVTTKYMALFDNIIHHMRFPKFIEIVSNELGKECEEIFEGL 1537
HNCVQAFA+Q++ P+V T+YMALF NI+H MRF KF+ IVS EL KECEEI EGL
Sbjct: 61 HNCVQAFAIQQEA-----PRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 115
Query: 1536 LQHGRLSLNQILDRIKQTANQGNSAEDSVQDNFHKLVQARFVERCXXXXXXXXXXXXEXX 1357
LQHGRL+L QILDR K + +D+++++F KLV+A FVERC E
Sbjct: 116 LQHGRLTLEQILDRAKSNQREP-VVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEET 174
Query: 1356 XXXXXXXXXKVL----ETIEQXXXXXXAPLESMRFLVDDTWTNPSEEKDEETSHGVTIGQ 1189
L +TIEQ AP+++ RF V N + D+ +
Sbjct: 175 PARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVI---INTGTDVDDSPN------- 224
Query: 1188 KRKLDSIESDDVSLLADGKKEILWRVNFEEFVRCLRHKACVENIRRRMNVEAGIVLEAIL 1009
RK D++E D + A +K++LWR NFEEFVRCLRHKAC+ N++ R++ A IVL A+L
Sbjct: 225 -RKQDALELDKETG-ASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAML 282
Query: 1008 ELSRKSEAKVKTVNTVPLSVNAMYDQVIKKEAGLGMNLESTRAALGQLGCEDAMLGTDDS 829
E +R E KVKT N+VPLS++ +++ V+K EAG M LE R +L QLGC + G +S
Sbjct: 283 EATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAES 342
Query: 828 FSIDLKTIIEIAQNEEVESIVLKRYGREAYRMFRLLSRAEHLIETDKIADTTFVEKKDTL 649
+S+DLK IIE+AQN+EVESI LKRYGR+AYR+FRLLS++ L+ETDKI+DTTFVEKKDT
Sbjct: 343 YSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDTA 402
Query: 648 KLLYRLWTDNYLQMQKVNVPGAKQSEFLLWKVNKQPLWENVLDEMYHAALNLRLRIAHEQ 469
K+LY+LW D YLQM+K+N+ G++QS+FLLWKV K LW +VL+EMYH+ALNL LR+A+E
Sbjct: 403 KILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYEL 462
Query: 468 EQEKEILQIPKERLIGELGNRYKRLVKVRIILESSLMNLDGAILLFHEF 322
EQE+EI+Q+P+E+ +G LGNR++RL KVRI+LESSLM LD AI+LF++F
Sbjct: 463 EQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 511
>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 451 bits (1160), Expect = e-124
Identities = 248/531 (46%), Positives = 348/531 (65%), Gaps = 6/531 (1%)
Frame = -2
Query: 1896 MVPQQGIKLAVYLVASYFGDLNAKVCDCLLRRGTLTLANIIMFTDLSGVNVKNCLLVLIH 1717
M P+ GIKLAV+L+++ FGD AKVCDCLLR+GTL L +I+ LS VK L VLI
Sbjct: 1 MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60
Query: 1716 HNCVQAFAVQEDGAMGKLPKVTTKYMALFDNIIHHMRFPKFIEIVSNELGKECEEIFEGL 1537
HNCVQAFA++ +G G+ P V T+YM LFDNI+H MRFPK + IVS EL KECEE+FE
Sbjct: 61 HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAF 120
Query: 1536 LQHGRLSLNQILDRIKQTANQGN-SAEDSVQDNFHKLVQARFVERCXXXXXXXXXXXXEX 1360
L+HG L+L QILDR+ N+GN + +D+++ +F KLV A +VERC E
Sbjct: 121 LKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEEK 180
Query: 1359 XXXXXXXXXXKV----LETIEQXXXXXXAPLESMRF-LVDDTWTNPSEEKDEETSHGVTI 1195
LE EQ P ++ F ++ DT + + +K GV I
Sbjct: 181 TPARKHDANSAKAVEELEIGEQCDIAKATPSKAKGFPVITDTCGDINGDKSIGNPPGVVI 240
Query: 1194 GQKRKLDSIESDDVSLLADGKKEILWRVNFEEFVRCLRHKACVENIRRRMNVEAGIVLEA 1015
G+KRK D+++ D S A +K++ WR N++E V LRHKAC+EN+R R++ A IVL A
Sbjct: 241 GKKRKQDALKLDTESGAAS-EKDVPWRANYKELVCHLRHKACIENVRARLDSGAAIVLSA 299
Query: 1014 ILELSRKSEAKVKTVNTVPLSVNAMYDQVIKKEAGLGMNLESTRAALGQLGCEDAMLGTD 835
+LE ++ +E VK +V LS++ + + V++ EAG M LE RA+L QLGC +G D
Sbjct: 300 MLEATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTLERIRASLVQLGCHPNGVGAD 359
Query: 834 DSFSIDLKTIIEIAQNEEVESIVLKRYGREAYRMFRLLSRAEHLIETDKIADTTFVEKKD 655
+++IDLK IIE+AQN+EVES+VLKRYGREA+R+FRLLS++ +ET KI+DTTF+EKK+
Sbjct: 360 RTYNIDLKKIIELAQNDEVESMVLKRYGREAHRIFRLLSKSCCPLETTKISDTTFIEKKE 419
Query: 654 TLKLLYRLWTDNYLQMQKVNVPGAKQSEFLLWKVNKQPLWENVLDEMYHAALNLRLRIAH 475
K+LY+LW D L M+K+ + ++QS+F+LWKV K W ++LDEMYHAALNL +
Sbjct: 420 AAKILYKLWKDECLHMEKIVLNESRQSQFMLWKVKKDTFWRHILDEMYHAALNLSI---- 475
Query: 474 EQEQEKEILQIPKERLIGELGNRYKRLVKVRIILESSLMNLDGAILLFHEF 322
+I+++ +++ +G L R RL I+L++SLM LD A++LFH+F
Sbjct: 476 ------QIIELRRDKHVGALRERDVRLA---ILLQASLMKLDDALMLFHDF 517
>ref|XP_002321920.1| predicted protein [Populus trichocarpa] gi|222868916|gb|EEF06047.1|
predicted protein [Populus trichocarpa]
Length = 519
Score = 446 bits (1148), Expect = e-123
Identities = 247/530 (46%), Positives = 341/530 (64%), Gaps = 6/530 (1%)
Frame = -2
Query: 1893 VPQQGIKLAVYLVASYFGDLNAKVCDCLLRRGTLTLANIIMFTDLSGVNVKNCLLVLIHH 1714
V Q GIK AV+++ ++FG L AKVCDCLL++G L L I+ +T+LS V+NCLLVLI H
Sbjct: 1 VSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQH 60
Query: 1713 NCVQAFAVQEDGAMGKLPKVTTKYMALFDNIIHHMRFPKFIEIVSNELGKECEEIFEGLL 1534
NC+Q F ++E+G G++ KV++ YM LFDN++H +RF KF+ IVS E K C ++ E LL
Sbjct: 61 NCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETLL 120
Query: 1533 QHGRLSLNQILDRIKQTANQGNSAEDSVQDNFHKLVQARFVERCXXXXXXXXXXXXEXXX 1354
QHGRLS QI D + ++ G +++Q+N HKLV AR+VERC E
Sbjct: 121 QHGRLSSEQIFDGFRDRSSSGGM--EALQENMHKLVMARYVERCPISEPFLALPSEEEAA 178
Query: 1353 XXXXXXXXKVL-----ETIEQXXXXXXAPLESMRFLVDDTWTNPSEEKDEETSHGVTIGQ 1189
ET+EQ P E MRF + ++ E + IG
Sbjct: 179 PVRRRGAKSAKAFLEPETLEQRVLVAAVPPEGMRFSFELNPEIGADRDKVENNSSSNIGD 238
Query: 1188 KRKLDSIESDDVSLLADGKKEILWRVNFEEFVRCLRHKACVENIRRRMNVEAGIVLEAIL 1009
KRKLD++ESD +AD K+ LWRVNFEEF+R LRHK C+E +R R++ EA V A+L
Sbjct: 239 KRKLDALESDIDGGVAD-KQVALWRVNFEEFIRRLRHKICIETVRTRLDDEAATVFTAML 297
Query: 1008 ELSRKSEAKVKTVNTVPLSVNAMYDQVIKKEAGLGMNLESTRAALGQLGCEDAMLG-TDD 832
+ SR E K+KT ++VPLS N++Y +VIK E G M L+ + L L + D+
Sbjct: 298 DASRSEEKKIKTASSVPLSENSIYAEVIKSEKGRNMTLDYVISVLVGLSSSPPFVRVVDN 357
Query: 831 SFSIDLKTIIEIAQNEEVESIVLKRYGREAYRMFRLLSRAEHLIETDKIADTTFVEKKDT 652
S+SID K IE+AQ + ESIV K+YG++AYRMFRLLS+A L+ETDKI+D+ F+EKK+T
Sbjct: 358 SYSIDFKHTIEVAQTD--ESIVYKKYGKDAYRMFRLLSKAGRLLETDKISDSIFLEKKET 415
Query: 651 LKLLYRLWTDNYLQMQKVNVPGAKQSEFLLWKVNKQPLWENVLDEMYHAALNLRLRIAHE 472
+L ++W +YLQM+K+ A ++FLLWKVN L E VLD+M+HAALNL LR+A+E
Sbjct: 416 ANILSKMWQGDYLQMEKLI---AGPTQFLLWKVNMINLRERVLDDMFHAALNLSLRVAYE 472
Query: 471 QEQEKEILQIPKERLIGELGNRYKRLVKVRIILESSLMNLDGAILLFHEF 322
EQ+KEIL + + G + +Y++L KVR +LESS M LD AI++FH+F
Sbjct: 473 LEQQKEILHLGVD---GPMKEKYEKLKKVRFLLESSRMKLDDAIMIFHDF 519
>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
sativus]
Length = 518
Score = 439 bits (1128), Expect = e-120
Identities = 250/536 (46%), Positives = 338/536 (63%), Gaps = 10/536 (1%)
Frame = -2
Query: 1899 VMVPQQGIKLAVYLVASYFGDLNAKVCDCLLRRGTLTLANIIMFTDLSGVNVKNCLLVLI 1720
+++ Q GIK AV+++ ++FG+L AKVC+ LLR+G LTL +I FT+L+ V N LL+LI
Sbjct: 1 MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
Query: 1719 HHNCVQAFAVQEDGAMGKLPKVTTKYMALFDNIIHHMRFPKFIEIVSNELG--KECEEIF 1546
HNCVQAF G PK T Y+ALF NI+H MRF KF+ I S +LG K C+E+
Sbjct: 61 QHNCVQAFT-----DFGDAPKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 115
Query: 1545 EGLLQHGRLSLNQILDRIKQTANQGNSAEDSVQDNFHKLVQARFVERC---XXXXXXXXX 1375
EGLLQ+GRLS+ Q+++R + ++ + D V D+ KL+ A FVERC
Sbjct: 116 EGLLQNGRLSMEQLVERAE---SRNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVE 172
Query: 1374 XXXEXXXXXXXXXXXKVLETIEQXXXXXXAPLESMRFLVDDTWTNPSEEKDEETSHGVTI 1195
+V ET+EQ P+E +RF + D TNP EK E H
Sbjct: 173 EPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGD--TNPEAEKSEH--HSQIS 228
Query: 1194 GQKRKLDSIESDDVSLLADGKKEILWRVNFEEFVRCLRHKACVENIRRRMNVEAGIVLEA 1015
GQKRK D +E S ADG ILWR N++EF+RCLRHKAC+E++R + + VL A
Sbjct: 229 GQKRKHDDLEIAQDSGDADG--PILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSA 286
Query: 1014 ILELSRKSEAKVKTVNTVPLSVNAMYDQVIKKEAGLGMNLESTRAALGQLGCEDAMLGTD 835
ILE +R SE VKT TVPLS++ +Y++V+K E G M L+ A+L LGC G D
Sbjct: 287 ILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCP----GMD 342
Query: 834 D-----SFSIDLKTIIEIAQNEEVESIVLKRYGREAYRMFRLLSRAEHLIETDKIADTTF 670
D ++D IIE AQ +EVESIVLKRYGR+AYRMFR LS+ L+ET+KI+D++F
Sbjct: 343 DYKISMFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSF 402
Query: 669 VEKKDTLKLLYRLWTDNYLQMQKVNVPGAKQSEFLLWKVNKQPLWENVLDEMYHAALNLR 490
V+K + K+LYRLW D YL M+KV + + S LLW+V++ LWE+VLDEMYHA+LNL+
Sbjct: 403 VDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQ 462
Query: 489 LRIAHEQEQEKEILQIPKERLIGELGNRYKRLVKVRIILESSLMNLDGAILLFHEF 322
LR+AHE E+ KE+L +PK+ L + VR +L SSL+ LD A++LFH+F
Sbjct: 463 LRLAHEIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLFHDF 518