BLASTX nr result
ID: Lithospermum22_contig00017163
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00017163
(676 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containi... 170 1e-46
emb|CBI19307.3| unnamed protein product [Vitis vinifera] 170 1e-46
ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containi... 175 6e-45
ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containi... 175 6e-45
ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containi... 160 1e-41
>ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
[Vitis vinifera]
Length = 762
Score = 170 bits (431), Expect(2) = 1e-46
Identities = 92/190 (48%), Positives = 122/190 (64%), Gaps = 5/190 (2%)
Frame = +3
Query: 3 YDLIKKMDFEPNEFIWSMIIAGCRSHGKTDLEYYAAEQLLKHNLKDSGTYFLLLNMYITA 182
+D IK+MD EPNEFIWS++IAGCRS GK +L +YAAEQLL KD+ TY LLLNMY++A
Sbjct: 540 FDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSA 599
Query: 183 ERWXXXXXXXXXXXXEGVKKLRNWSSISIKDKVYWFKQGS*VH-YFXXXXXXXXXXXXXA 359
+W E + +L++WS ISIKDK+Y FK+ + H A
Sbjct: 600 GKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKA 659
Query: 360 KVLGYE-PQTISGSGEEEN---KESTTSTAPHSEKLALAFGLLNVTNTATIRVNKNTSMC 527
K GYE +++ + EEE+ +++ TS HSEKLA+AFGLLN +N IRV K+ SMC
Sbjct: 660 KSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNAVPIRVTKSISMC 719
Query: 528 RDCHNFMKFI 557
RDCHNF++ I
Sbjct: 720 RDCHNFIRII 729
Score = 42.4 bits (98), Expect(2) = 1e-46
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1
Query: 559 SKRLHIFVNGHCSCGDFTNLI 621
SKRLH F+NGHCSCGDF LI
Sbjct: 742 SKRLHKFINGHCSCGDFGTLI 762
>emb|CBI19307.3| unnamed protein product [Vitis vinifera]
Length = 683
Score = 170 bits (431), Expect(2) = 1e-46
Identities = 92/190 (48%), Positives = 122/190 (64%), Gaps = 5/190 (2%)
Frame = +3
Query: 3 YDLIKKMDFEPNEFIWSMIIAGCRSHGKTDLEYYAAEQLLKHNLKDSGTYFLLLNMYITA 182
+D IK+MD EPNEFIWS++IAGCRS GK +L +YAAEQLL KD+ TY LLLNMY++A
Sbjct: 461 FDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSA 520
Query: 183 ERWXXXXXXXXXXXXEGVKKLRNWSSISIKDKVYWFKQGS*VH-YFXXXXXXXXXXXXXA 359
+W E + +L++WS ISIKDK+Y FK+ + H A
Sbjct: 521 GKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKA 580
Query: 360 KVLGYE-PQTISGSGEEEN---KESTTSTAPHSEKLALAFGLLNVTNTATIRVNKNTSMC 527
K GYE +++ + EEE+ +++ TS HSEKLA+AFGLLN +N IRV K+ SMC
Sbjct: 581 KSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNAVPIRVTKSISMC 640
Query: 528 RDCHNFMKFI 557
RDCHNF++ I
Sbjct: 641 RDCHNFIRII 650
Score = 42.4 bits (98), Expect(2) = 1e-46
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1
Query: 559 SKRLHIFVNGHCSCGDFTNLI 621
SKRLH F+NGHCSCGDF LI
Sbjct: 663 SKRLHKFINGHCSCGDFGTLI 683
>ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 755
Score = 175 bits (444), Expect(2) = 6e-45
Identities = 97/188 (51%), Positives = 120/188 (63%), Gaps = 3/188 (1%)
Frame = +3
Query: 3 YDLIKKMDFEPNEFIWSMIIAGCRSHGKTDLEYYAAEQLLKHNLKDSGTYFLLLNMYITA 182
+D++ KM+FEPNE IWSM+IAGCRSHGK+DL +YAAEQLLK KD TY LLNM+I+A
Sbjct: 535 FDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISA 594
Query: 183 ERWXXXXXXXXXXXXEGVKKLRNWSSISIKDKVYWFKQGS*VH-YFXXXXXXXXXXXXXA 359
RW E V KL++WS ISIK+KVY FK H
Sbjct: 595 GRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEV 654
Query: 360 KVLGYEP-QTISGSGEEENKEST-TSTAPHSEKLALAFGLLNVTNTATIRVNKNTSMCRD 533
K LGYEP + + +EEN+E +ST HSEKLA+AFGLLN+ IRV K+ +MCRD
Sbjct: 655 KALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRD 714
Query: 534 CHNFMKFI 557
CHNF++FI
Sbjct: 715 CHNFIRFI 722
Score = 31.6 bits (70), Expect(2) = 6e-45
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 559 SKRLHIFVNGHCSCGDF 609
SK+LH F+NG+CSCG +
Sbjct: 735 SKQLHKFLNGYCSCGGY 751
>ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 749
Score = 175 bits (444), Expect(2) = 6e-45
Identities = 97/188 (51%), Positives = 120/188 (63%), Gaps = 3/188 (1%)
Frame = +3
Query: 3 YDLIKKMDFEPNEFIWSMIIAGCRSHGKTDLEYYAAEQLLKHNLKDSGTYFLLLNMYITA 182
+D++ KM+FEPNE IWSM+IAGCRSHGK+DL +YAAEQLLK KD TY LLNM+I+A
Sbjct: 529 FDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISA 588
Query: 183 ERWXXXXXXXXXXXXEGVKKLRNWSSISIKDKVYWFKQGS*VH-YFXXXXXXXXXXXXXA 359
RW E V KL++WS ISIK+KVY FK H
Sbjct: 589 GRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEV 648
Query: 360 KVLGYEP-QTISGSGEEENKEST-TSTAPHSEKLALAFGLLNVTNTATIRVNKNTSMCRD 533
K LGYEP + + +EEN+E +ST HSEKLA+AFGLLN+ IRV K+ +MCRD
Sbjct: 649 KALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRD 708
Query: 534 CHNFMKFI 557
CHNF++FI
Sbjct: 709 CHNFIRFI 716
Score = 31.6 bits (70), Expect(2) = 6e-45
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 559 SKRLHIFVNGHCSCGDF 609
SK+LH F+NG+CSCG +
Sbjct: 729 SKQLHKFLNGYCSCGGY 745
>ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
[Glycine max]
Length = 754
Score = 160 bits (405), Expect(2) = 1e-41
Identities = 89/186 (47%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Frame = +3
Query: 6 DLIKKMDFEPNEFIWSMIIAGCRSHGKTDLEYYAAEQLLKHNLKDSGTYFLLLNMYITAE 185
+ IKKM++EP+EFIWS IAGCRSHG +L +YA+EQLL KD TY LLLNMY++A+
Sbjct: 536 NFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSAD 595
Query: 186 RWXXXXXXXXXXXXEGVKKLRNWSSISIKDKVYWFKQGS*VH-YFXXXXXXXXXXXXXAK 362
R+ E V KL++WS ISIKDKVY FK H AK
Sbjct: 596 RFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLEDLLAKAK 655
Query: 363 VLGYEP-QTISGSGEEENKESTTSTAPHSEKLALAFGLLNVTNTATIRVNKNTSMCRDCH 539
LGYE +++ S EEE +++++ T HSEKLA+ FGL N+ N++ IRV K+T +CRD H
Sbjct: 656 NLGYEMLESVEISDEEEEEKTSSPTIYHSEKLAITFGLENLPNSSPIRVVKSTLICRDSH 715
Query: 540 NFMKFI 557
NF+K +
Sbjct: 716 NFIKCV 721
Score = 35.4 bits (80), Expect(2) = 1e-41
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 559 SKRLHIFVNGHCSCGDF 609
SKRLH FVNG CSCG+F
Sbjct: 734 SKRLHKFVNGECSCGNF 750